Os03g0166200

From RiceWiki
Revision as of 12:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0166200| Description = Similar to Prolyl 4-hydroxylase alpha-1 subunit-like protein| Version = NM_001055608.2 GI:297600381 GeneID:4331736| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0166200

Description

Similar to Prolyl 4-hydroxylase alpha-1 subunit-like protein

Version

NM_001055608.2 GI:297600381 GeneID:4331736

Length

2007 bp

Definition

Oryza sativa Japonica Group Os03g0166200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3548214..3550220

Sequence Coding Region

3549592..3549694,3549860..3550164

Expression

GEO Profiles:Os03g0166200

Genome Context

<gbrowseImage1> name=NC_008396:3548214..3550220 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:3548214..3550220 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ttttgctgcaaaatttcattacaatttatcttctccccacaggctaggttatcacagcctaaagacgagacatggtccgactgcgcagaacagggcttcgcagtgaaacctaccaaaggcagtgcggtgctgttcttcagcctctaccccaacgcgacgttcgacccaggcagcctgcacggaagctgccctgtcatacaaggcgagaagtggtcggcgacgaaatggatccatgtgagatcctacgacgaaaatggccggagatcctcggacaaatgcgaggatcaacatgctctctgctccagctgggctgctgctggagagtgtgccaagaaccccggttacatggtcggcaccagtgaatcccctggcttctgccggaagagttgcaacgtatgtacatcgtag</cdnaseq>

Protein Sequence

<aaseq>FCCKISLQFIFSPQARLSQPKDETWSDCAEQGFAVKPTKGSAVL FFSLYPNATFDPGSLHGSCPVIQGEKWSATKWIHVRSYDENGRRSSDKCEDQHALCSS WAAAGECAKNPGYMVGTSESPGFCRKSCNVCTS</aaseq>

Gene Sequence

<dnaseqindica>1379..1481#1647..1951#ggccccacagatcaacctcatcgtctccgacccccctccgccgcccaagggagctaggccggcggcgctcgtctctgccgccgccgccgtcgcacgggcatggctcgtctcgtcctcctcgtcgtcctactgcttctcctctccgtcaccggcgagacgtccgccaccggcggtggcggggaaggcgggcgattcgacgcctcccgcacagtcgatgtctcgtggagccccaggtaaattaatcgaccgccgcgaatctctgggctcaggtgcggcggcgagccggcggctttccgttgatctctccattctgtgaggtggcagggtgttcctgtacgaggggttcctgtcggatgtggagtgcgaacacctcatcgcgctggtaggttgcgctcaaatcaaatcccctcttgggaaatctgatacgtgcgttcattgagttgttattttttctatttttgtgtgcgtgtgtgaattgcgaaggcgaagcagggtaggatggagaggtcgacggtggtaaacggcaagtcgggggagagcgtgatgagcaagacgaggaccagctccggcatgttcctcatcaggaaacaggtgaggctacgagcgagggtcgctttaaggctggaaaataagcaatgtcgcttgtccggatcacataagcatccaaacaatttcaattttcaagtctttgttgagcaaggattcatttgaaacgtaagaatttcacaggggttttggactgatcatcggtgcaattcttccaaaattcttcattccaaaatgaggtcaaagtccacatttggattataggatttttcttttaccatgtgaatacgcaggaattaatcgagtttcatgtattcctaaagggctaaaatagccaatgttctatgcacgttgcatatacctatactgaattttctgattgcagtgatttgtcagcacgcgtgtggataataaaaattgcttctgaccctctaatgttttatttatctgaaggatgaagtcgttgcaagaatagaggagaggattgctgcttggaccatgtttccagcaggtatggtgcaagggcacagaacactggaaaactgcttaattggaccttgctccaaatgttcttcagagtgcatcaccttctattgctttgcccgttttgtgattcttgaacggtcagaaaacggtgaatctatgcaaatgctacgttatgggcaaggtgagaaatacgagccacactttgattacattcgcggacggcaagcctcagctcgtggaggtcatcggattgctactgtgctcatgtacctgtccaatgtcaagatgggtggagagaccgtcttccccgatgcagaggtattttacaccttctggcctcgtttgattttgctgcaaaatttcattacaatttatcttctccccacaggctaggttatcacagcctaaagacgagacatggtccgactgcgcagaacagggcttcgcaggtatggttgacactcgcaaaccaaaattatatttacaaattttggtttgttcaaatgtaataatgtgcaatttcgaagataagagtttgaactcgcaactgttgggctcgtcatgcagttttgctttttgtccgcttgtaacaatgtttggattttgtttggcagtgaaacctaccaaaggcagtgcggtgctgttcttcagcctctaccccaacgcgacgttcgacccaggcagcctgcacggaagctgccctgtcatacaaggcgagaagtggtcggcgacgaaatggatccatgtgagatcctacgacgaaaatggccggagatcctcggacaaatgcgaggatcaacatgctctctgctccagctgggctgctgctggagagtgtgccaagaaccccggttacatggtcggcaccagtgaatcccctggcttctgccggaagagttgcaacgtatgtacatcgtagtttcagactactaatcgactaataatcataataaatacatattttattcttactcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0166200, RefSeq:Os03g0166200