Os03g0167400

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Revision as of 12:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0167400| Description = Protein of unknown function DUF620 family protein| Version = NM_001055616.1 GI:115450960 GeneID:4331744| Length = 36...")
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Gene Name

Os03g0167400

Description

Protein of unknown function DUF620 family protein

Version

NM_001055616.1 GI:115450960 GeneID:4331744

Length

3648 bp

Definition

Oryza sativa Japonica Group Os03g0167400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3617018..3620665

Sequence Coding Region

3617018..3617248,3617353..3617697,3620141..3620665

Expression

GEO Profiles:Os03g0167400

Genome Context

<gbrowseImage1> name=NC_008396:3617018..3620665 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:3617018..3620665 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagatcgagggtggcgctggagacgttggcggaggagccgggcggcggcgaggaggaggcggcgcggcggaagtcgtcggggctgcaggcggcgctgcaccgggtggcgcgccgcttgctctccggcgccggggaagacgcccgccccgccgctgacctccgcgtgctgctctccgtcctcgcctgcccgctctcccccgtgcccatcctcccccgcctcccccgccatgtggcgtcgtcggcgcagtacatcatagagcagttcagggcgacgacggggtgcggcaagatagagggcgcggtgaagagcatgtacgcggcggggagggtgcggctggcgatgctgcaggatccggccggcggcggcgccggcggtggcggcggcggcgggagggggcacgaggggagcttcgtgatgtggcagctggcgcccagcatgtggatcgtggagatggcggtggccgggcagcacgtcgccgcggggagcgacggacgcgtcgcctggcgccgcacgccgtgggtcggcgcccacgccgcccgcggcggctcacgcccgctccgccgcgccctccaggggttggatccggtgacgatcgcggcgatcttctcgacggcggagcacgccggcgagaagctggtggacggcgaggactgcttcgtgctgcggctggacgtggggccgtcggtgctgtcgagctggagcgacggcacggcggaggtgatccggcacggcctgacggggttcttcagccagcggagcggcctcctcgtccgcctcgaggactcgcagctcacgcggatccagtcccccggcgccgccgccatgtactgggagaccaccatctcctccagcctcgccgactaccgcgccgtcgacggcggcggcggcgtccacgtcgcgcactccggccgctccacggcgcacctcgcccgcttcggcgtcggcgttcgcgccgcccgcgtcgtgacgcggatggaggagtcgtggaccatcgacgacgtggcgttcaacgtgcccgggctcggccccgacgccttcatcccgcccgaggaggtcaggaggagccgcttctacgacgccatggccgccggcaagtga</cdnaseq>

Protein Sequence

<aaseq>MRSRVALETLAEEPGGGEEEAARRKSSGLQAALHRVARRLLSGA GEDARPAADLRVLLSVLACPLSPVPILPRLPRHVASSAQYIIEQFRATTGCGKIEGAV KSMYAAGRVRLAMLQDPAGGGAGGGGGGGRGHEGSFVMWQLAPSMWIVEMAVAGQHVA AGSDGRVAWRRTPWVGAHAARGGSRPLRRALQGLDPVTIAAIFSTAEHAGEKLVDGED CFVLRLDVGPSVLSSWSDGTAEVIRHGLTGFFSQRSGLLVRLEDSQLTRIQSPGAAAM YWETTISSSLADYRAVDGGGGVHVAHSGRSTAHLARFGVGVRAARVVTRMEESWTIDD VAFNVPGLGPDAFIPPEEVRRSRFYDAMAAGK</aaseq>

Gene Sequence

<dnaseqindica>1..231#336..680#3124..3648#atgagatcgagggtggcgctggagacgttggcggaggagccgggcggcggcgaggaggaggcggcgcggcggaagtcgtcggggctgcaggcggcgctgcaccgggtggcgcgccgcttgctctccggcgccggggaagacgcccgccccgccgctgacctccgcgtgctgctctccgtcctcgcctgcccgctctcccccgtgcccatcctcccccgcctcccccgccatgtccgttcttgatcgtgttcttctgcttcgtcttcgtcgtcgtctatgcaaagcttggtttggtttggtttgctcatggtttggttggttggtggtgcgtgcaggtggcgtcgtcggcgcagtacatcatagagcagttcagggcgacgacggggtgcggcaagatagagggcgcggtgaagagcatgtacgcggcggggagggtgcggctggcgatgctgcaggatccggccggcggcggcgccggcggtggcggcggcggcgggagggggcacgaggggagcttcgtgatgtggcagctggcgcccagcatgtggatcgtggagatggcggtggccgggcagcacgtcgccgcggggagcgacggacgcgtcgcctggcgccgcacgccgtgggtcggcgcccacgccgcccgcggcggctcacgcccgctccgccgcgccctccaggttggcaccaacctctctccacctttctccacttgcaaaccaaagctgctgcatctcgccgccattgccattccacactgacatcgcatccttctttttttttcccctctccttttctcgcatctcctgctactttttactctcatcgctggcgctcgccatgggcgtgcctcgcgtgcaccgtgttactactgctagcttagctagccgagtagccagctgctcatccgcctatgacaggtgggtcccacactggggtacccttctccttcctttgctctttttgcggcaaatgccccccttttgctttgcatctgtaagcgtgtgtggtcatggctgctgcatctgcatgagaaagtagtaaaaagaagagaggaaaagaaaaaaagaggaggccatggagaagatccattaaacaagaagaacaattggattttgaggaagaatctttgtcaagagcagttggatatcatatggatggcatcgcacacatgctctcactgcactgcacagttgtaatcttgggatctggagctggagctcgttcctgcaggttgctggttgctaccaatgcatgccatgccgcacttgttgttgatgtcattattgatgctgcatgcatgcctcatatgctttgttaatactactaactgtcttgtttgaccctagctagagagagagagagagagagagagagcgctaggtctgagattagccgccttgccattgcctcacatgggactagaatatatgtttgcttgggctggctcttttttatgaaagtttgatcacttgattagcgtagactgggcgctttagtttagggcttatcctaagcaacttggcaaatggtaccttgtttctttagctttcttgctgggcaacacaggtacatatgttagtgctggttgggagttgactggcgcaagttgatttttttcttgtaaattttggcccaaagattacgactgtttgtatgtgaaaatggttaaggtgctctcatgcttatgatcaaacagtattcccaacctgctgaaataaaaacaaatgataaatatatgtgtgtggtttattaaattagacaatcttttctttaggttttctagtacttctttaagcaaagctatcattttcctaaccaacctggtggtaggaaatttgggtactgatgtcatgatgtgattcttgaaatctctatacttacctaacattttatttaattgtacagagcagctcatatctgatcaggtctaactgtttgaatgttagatcaatgtgccattgataattgattagttaattggttaattgcttcatttaggccacccattagcataggacctagttgactagttagcagaagtttcaccaatctcacttcagaattccaaaaggttttaccaaatctctgtagagaaagctaagaaattatcatggatggcctaaataaaaaattgtttctgttgatgtctcattttctcgttgaggagcagcatatgtagcttgtctcttagctctttgtactatagtactttgtacaaggcgttttgctcaagagagtagtgaatttatatttatctgcatattgtcccctgtcccgtgccaacaaactaaggagcactgaatgttcttaattctgacctaaatacagatgctagcacaacccaaataattaattcactggtagattgccattccccttactccttacccaaatttcatttcagagtggaatacctgaagattctgaattttcctccattttcagaaaacggggtgaaaatctctccagacataaatacctgaacacttgaattaatgccgtaactttgattttgcttgaatatctcgcagtgctgttgtactggactattatgaaattccccaacattgctggtccaaatgcaccaaacacatgtataatgtagtatgccaactctgctgtgcagagctatccactggcaagctattaattccaattaaattcctactaatataattataatctttatgatatttcattagtgtacgtgcacagctagccatgctaccttgtcaaaatttccatattccaagaagtgtaacacagtagtatacacttttcacccatggaaattttagctcatttactacaccattaaccccagaataagtttatttttcacccatttacacatactagtagtaaatcaaaatgaatttattcttcttggctattctcaatgaaatttctcaataattactcttcttggctattttaaatcatttctctttttatctattctcaatgaatttattttttacttttacaaattccgatacaataattactcaaaaataaacttattttaagataaatgattatgaaactaaaaatgcatttattctagggcagagggtgtacattttactgtaaaactaatgatgggtttgtgcgtgataggggttggatccggtgacgatcgcggcgatcttctcgacggcggagcacgccggcgagaagctggtggacggcgaggactgcttcgtgctgcggctggacgtggggccgtcggtgctgtcgagctggagcgacggcacggcggaggtgatccggcacggcctgacggggttcttcagccagcggagcggcctcctcgtccgcctcgaggactcgcagctcacgcggatccagtcccccggcgccgccgccatgtactgggagaccaccatctcctccagcctcgccgactaccgcgccgtcgacggcggcggcggcgtccacgtcgcgcactccggccgctccacggcgcacctcgcccgcttcggcgtcggcgttcgcgccgcccgcgtcgtgacgcggatggaggagtcgtggaccatcgacgacgtggcgttcaacgtgcccgggctcggccccgacgccttcatcccgcccgaggaggtcaggaggagccgcttctacgacgccatggccgccggcaagtga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0167400, RefSeq:Os03g0167400