Os03g0167500

From RiceWiki
Revision as of 12:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0167500| Description = Similar to ReMembR-H2 protein JR702 (Fragment)| Version = NM_001055617.1 GI:115450962 GeneID:4331745| Length = 4559 ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0167500

Description

Similar to ReMembR-H2 protein JR702 (Fragment)

Version

NM_001055617.1 GI:115450962 GeneID:4331745

Length

4559 bp

Definition

Oryza sativa Japonica Group Os03g0167500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3625353..3629911

Sequence Coding Region

3626755..3626893,3627294..3627518,3627934..3628338,3628835..3629249,3629346..3629667

Expression

GEO Profiles:Os03g0167500

Genome Context

<gbrowseImage1> name=NC_008396:3625353..3629911 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:3625353..3629911 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaatcgaagaagaacaatgctattgcttatctgtctctgtgcaacattttgcctcatgactcagttaggagctgcaaatgtagtgctgatggggacaaatctgactttgtcgtttgatgatgttgaggcaagttttgctccaggagtgaaaggttcaggttttgaaggcgttgtttatactgctgaacctttggacgcctgcagtccgttaacaagtaaagcagaaaagggtccaccatctccatttgcactgatcataagaggcgggtgcacatttgatgaaaaagtaaaaaatgcacaggatgctggattcaaagctgcaatagtatacgacaatgaaaatagcggggttctgatttcaatggctggaagctcaggtggtattcacatttatgcggtgttcatctcgaaggcctcaggggaggtgttgaagaaattttcaggccatactgatgtagaggtgtggatactacctgcgtttgagaactcagcctggtcaatcatggcaatttcattcatatctctgcttgccatgtctgcggttctagctacttgtttctttgtgagaagacatcatataaggcgggaccggcctagaattccagaagcccgagaattccatggaatgagcagtcaattagtcaaggcaatgccaagccttatcttcacgaaggtgcaagaggacaactgcacatcatcaatgtgtgccatttgcttggaagactacaatgtcggagaaaaattaagagtgttgccttgccgtcacaagttccatgcagcttgtgtggacctttggctcacaacttggagaactttttgccctgtatgcaaacgtgatgcaagtactggaataccagatcctccagcctcagagactacaccattgctttcttctgcagttcgtttgccttctcagtcatcttcgttccggtcaagcgtggcagcatcgcctccaagaccaataagtcgacgaccttcatcacagtccatatctcggatttatgctgcttctggtacccccaactctcctaaccccataaggtctttcacaaactcaactgccatgagcataagtagaagcaatgtggacttatcaaacatgtcttcccgccctcgcgcctcacacctcgcctccgcacattctttggttggcagtcacttgtctccaccaatcaatataagctactatctcggttcatccagccagcatcggtcatacctaaggcgctgtggggaatcagggcctagcttgtctaccatggcccctcagtcgccgcaacagtcccagttacgtcatggcggcgaatccgacttaaatctagcaggagcatcctcaggccagtctttccggcaatcctacctgagacactgtgctgattcagaggtaaatctagcaggagcatcctcaggccagtctttccggcaatcctatctgagacactgtgctgattcagatgcaagcttatctgccatggcatcagctcaatccttgccaggatgctga</cdnaseq>

Protein Sequence

<aaseq>MNRRRTMLLLICLCATFCLMTQLGAANVVLMGTNLTLSFDDVEA SFAPGVKGSGFEGVVYTAEPLDACSPLTSKAEKGPPSPFALIIRGGCTFDEKVKNAQD AGFKAAIVYDNENSGVLISMAGSSGGIHIYAVFISKASGEVLKKFSGHTDVEVWILPA FENSAWSIMAISFISLLAMSAVLATCFFVRRHHIRRDRPRIPEAREFHGMSSQLVKAM PSLIFTKVQEDNCTSSMCAICLEDYNVGEKLRVLPCRHKFHAACVDLWLTTWRTFCPV CKRDASTGIPDPPASETTPLLSSAVRLPSQSSSFRSSVAASPPRPISRRPSSQSISRI YAASGTPNSPNPIRSFTNSTAMSISRSNVDLSNMSSRPRASHLASAHSLVGSHLSPPI NISYYLGSSSQHRSYLRRCGESGPSLSTMAPQSPQQSQLRHGGESDLNLAGASSGQSF RQSYLRHCADSEVNLAGASSGQSFRQSYLRHCADSDASLSAMASAQSLPGC</aaseq>

Gene Sequence

<dnaseqindica>1403..1541#1942..2166#2582..2986#3483..3897#3994..4315#atctccctccctccctccctcattattgattgattgattcgcagattcgccgctgccaccgcatcccgcccacccaccgcgcgccaccgcctccgccgccgacgagcccccgcggccaccgccaccgccacctcatcttctctcccaccaccgctccacagccgccctcccttacatggaagtcgacgtctccatcgccacgcccgcaccgcaggtccgaccacgattccccttcctctagagctttcttcttcttccgttctcgtcaatatcccgtgaaagctccgacctttccccctcctaggttttcttttctttttttttctttctactgccctagtcgctgcgaccgcgatggatgcgatggctgtatgctgctctggttacctggtgatccgatccggcttttcgcgttcgatattacctggggattagacgcgcttgttttttttttttttgtgccttcgatctgttgcttcctgtcttaggtttccgctggtggagctgagtagtattacatcgttttctccaatatatcactctagttgactcgctgagagaataatctgtgcgttcttgtttttgttcgtgccttcgatctgttgcttcctgtcttaggtttcggctggtggagctgagtagtatagtacatcgttttccccgatatatcactccttttgacttgctgagagaataatctgtgcgtacctctttaaaaagatactacttttatcgtaccactgatgatacttgattaggactcagggatggtatctttttggatgcccagttcaggagaaatagggatcctttgttgcgtcatagcttttcgtgattcctgagattaggaccagacctttgggtctcctgatatttgtttatttcgtcctaattctctccactcagtagacctattctccaattgtttcttagtactacgtagttagggaagatacctcctctggggctttatttcttaggagaatcatcattgcttgtcaagtaccatcttaacattgtttcttttccaaccattagaggcattaagagtaaatttttgttttggaaaacaagttaccatgtagtatttcttttttgttggtttacttgtttttgcgttgctcagtagtatgtactattccagggtctttctgtgcgaaagccctactctttggcttaatgttagttgacaggatcttgacgattgtcggttttcattgcaggaatcttagctgattggtgctttggactgcaggtctggacacgttgtccgtttcctgcttgtgcagacgtaggtttggagtctttctgagtgttaaggtggctttcctttttgtccttccatggttgaaatttgtatgaacaaccttgactttctcgaagatctgtgttggtcgataagatgaatcgaagaagaacaatgctattgcttatctgtctctgtgcaacattttgcctcatgactcagttaggagctgcaaatgtagtgctgatggggacaaatctgactttgtcgtttgatgatgttgaggcaagttttggtaagttctggacatcttatcatattagttttgttatagtagagtactaatagattctatttgtcgggatctcagtctccctacctgtgaaactttattacctaaaatttcacataccttgtaagccagttgcctatggtcattttggtcttaatgttttggttttcaaaaccttgtagttgtgctactgttttatttatggtagtgtgcgaatctgttgctgtatttcctattatatctttgtgttagctctctgactagaattagcttcgattttatcccattgattgtgccatgctgcattttcttgaaaggttcttttcttctacttcccattttcctaagtctatattgtcttgtcagaaagattcattatgctgtttattcaattggtttgcagctccaggagtgaaaggttcaggttttgaaggcgttgtttatactgctgaacctttggacgcctgcagtccgttaacaagtaaagcagaaaagggtccaccatctccatttgcactgatcataagaggcgggtgcacatttgatgaaaaagtaaaaaatgcacaggatgctggattcaaagctgcaatagtatacgacaatgaaaatagcggggttctgatttcaagtaatgtaccttatcactcccacttgttttttttttctgcaacatcttagttccactgtcagggttgggcatcatacgctccattcatggcataatagattataattatgtttcttttgtctttatattctcccttatgtccatatttgaggacctgtatatgtggcatgcattaagaagagatggggccatgtgagaggcacaagagaatgcttttcaaacttttccttgagaacggatgaaacaaaaatactgtctaggctgaaactttccaaaataagtaaaaaaatatgaaaaaaatagaaattgatacttttaaaagtcataccactttgatgcttttcactagttcatttagcattgtttagactttgggggcatatggttctgcattatctaactttgaagtttacagtggctggaagctcaggtggtattcacatttatgcggtgttcatctcgaaggcctcaggggaggtgttgaagaaattttcaggccatactgatgtagaggtgtggatactacctgcgtttgagaactcagcctggtcaatcatggcaatttcattcatatctctgcttgccatgtctgcggttctagctacttgtttctttgtgagaagacatcatataaggcgggaccggcctagaattccagaagcccgagaattccatggaatgagcagtcaattagtcaaggcaatgccaagccttatcttcacgaaggtgcaagaggacaactgcacatcatcaatgtgtgccatttgcttggaagactacaatgtcggagaaaaattaagagtgttgccttgccgtcacagtatgtttttctatctctgcaacaccacaactaccttttctagttcaaattgatacgttgaggacattcccatagcctattggttttaggaaagaaaatagtcatgttcagttgctaacttaactcttcaatccttggatttggaactgaaaacattctatgcaagtttttttagtctgtcatcacaattttgtgtaaagtactacaccactctgcatttttgttttatttgtttttgaatgtctggactaagtatgggtttgtgtatttcacacacaattagtacttttgtgtagtatccactttctgaaccttggaaattccacagtggcgttcactattgcagatgttttaactggacatttaagttatacttatgcacaattgattatttgaagagagatatgtgttgaataaacttgtataccttatatacaatctgctatctgaataatggtattccagtactctgatatttgtgcatattactttgcagagttccatgcagcttgtgtggacctttggctcacaacttggagaactttttgccctgtatgcaaacgtgatgcaagtactggaataccagatcctccagcctcagagactacaccattgctttcttctgcagttcgtttgccttctcagtcatcttcgttccggtcaagcgtggcagcatcgcctccaagaccaataagtcgacgaccttcatcacagtccatatctcggatttatgctgcttctggtacccccaactctcctaaccccataaggtctttcacaaactcaactgccatgagcataagtagaagcaatgtggacttatcaaacatgtcttcccgccctcgcgcctcacacctcgcctccgcacattctttggttggcagtcacttgtctccaccaatcaatataaggtacgcatcgccgcatatgtcccactctggctatgcatcacctagtccacatgttagctcatcctatgtctccaactctgggtatggatcttcaagctactatctcggttcatccagccagcatcggtcatacctaaggcgctgtggggaatcagggcctagcttgtctaccatggcccctcagtcgccgcaacagtcccagttacgtcatggcggcgaatccgacttaaatctagcaggagcatcctcaggccagtctttccggcaatcctacctgagacactgtgctgattcagaggtaaatctagcaggagcatcctcaggccagtctttccggcaatcctatctgagacactgtgctgattcagatgcaagcttatctgccatggcatcagctcaatccttgccaggatgctgatttctctgggatcagatcagcttctgtctgtactaagacctggcgtgacttgtgtatacatttgaggcatgtactataggctattggttgagagaaaatggtcgtatttgtttgtgtttctcctgctgccctgcccttttggttgtagtgattgttagcgctctatttgtttcaccctagagtgtatagtacaattgtacagcaactttcttttaaactaagcaatatcatccgcgcgttgccc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0167500, RefSeq:Os03g0167500