Os03g0167800

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Revision as of 12:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0167800| Description = Cyclin-like F-box domain containing protein| Version = NM_001055620.1 GI:115450968 GeneID:4331748| Length = 5035 bp|...")
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Gene Name

Os03g0167800

Description

Cyclin-like F-box domain containing protein

Version

NM_001055620.1 GI:115450968 GeneID:4331748

Length

5035 bp

Definition

Oryza sativa Japonica Group Os03g0167800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3643048..3648082

Sequence Coding Region

3643273..3643338,3646292..3647542

Expression

GEO Profiles:Os03g0167800

Genome Context

<gbrowseImage1> name=NC_008396:3643048..3648082 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:3643048..3648082 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgcggctgccggaggcgcgccgccgcggcccgcggccggaatccgcgtccgggtgccactggtagagtctgtgtcttgttactgcagggtagatggaggtcttaaaactgttgtgagtgctaggaagtttgtccctggtgcaaagctgtgcatgcaacctgacattaaaccaaacaagcgcaagtcaaggagctcacacaaagagaggtgccgaactcaggcaccacttctacctggccttcctgacgacctagctattacctgcctcatgcgggtccctcgacttgagcacacaaatcttcggttagtctgtaaacggtggaaccgactgttatctgggaactattattattccttgcgtaagaaacttggcatggcagaagaatgggtttttgtcttcaaaagggaccgtgatcggaagatttcttggcatgcctttgacccagttcaccaggtgtggaagtcactccctccagttccagcagagtattcagaggccgtgggctttggctgtgctgttcttagtggctgctatctgtacctgtttggtggcaaagacccagtccgagggtctatgaggcgtgttgtattttacaatgctcggataaacaagtggctccgagccccagatatgctacaaaagcgtcactgctttggttcctgtgtcataaacaaccgcctctatgttgctggtggggagtgtgaagggatacaaagaactctaagatctgctgaattttacgacccaaacaggaatagatggtcttacatcagtgaaatgagcacgggaatggtaccttttattggagttgtatatgatggcaaatggttcctgaaagggcttgattctcatcgtcaggttgtgagtgaggtctatatgccaacatccaacgtatggtcagtcactgctgatgaaatggttacgggctggcggaatccaagcatttgctttaatggacgtctttattcagcagaatgccgggacggatgcaagcttagagtctatgatagggacacacgatcgtggaccagattcatggacagcaggcgccatctgggcaattcacgagcttttgaagctgcagctctggtctccctaaatggaaagatctgcattatccgcaacaatatgagcatcactcttgtcgatgtctcaaacacaccaacagttatcgagattaacaatgctcacatgtgggatgtttttgctcggaagggccagcacaggtctttcatagcaaacttgtggttcaccattgcgggtcgtaatttcaagactcacattatccattgccaagtgctccaagtttga</cdnaseq>

Protein Sequence

<aaseq>MDAAAGGAPPRPAAGIRVRVPLVESVSCYCRVDGGLKTVVSARK FVPGAKLCMQPDIKPNKRKSRSSHKERCRTQAPLLPGLPDDLAITCLMRVPRLEHTNL RLVCKRWNRLLSGNYYYSLRKKLGMAEEWVFVFKRDRDRKISWHAFDPVHQVWKSLPP VPAEYSEAVGFGCAVLSGCYLYLFGGKDPVRGSMRRVVFYNARINKWLRAPDMLQKRH CFGSCVINNRLYVAGGECEGIQRTLRSAEFYDPNRNRWSYISEMSTGMVPFIGVVYDG KWFLKGLDSHRQVVSEVYMPTSNVWSVTADEMVTGWRNPSICFNGRLYSAECRDGCKL RVYDRDTRSWTRFMDSRRHLGNSRAFEAAALVSLNGKICIIRNNMSITLVDVSNTPTV IEINNAHMWDVFARKGQHRSFIANLWFTIAGRNFKTHIIHCQVLQV</aaseq>

Gene Sequence

<dnaseqindica>226..291#3245..4495#tgaacacgccgcaagattcgaagccaaaccaacccaagctcccaggagaggagagcatctcctgcatctgcggcctcccccatcccactgctgctgctgctggtttgaaaccaaggcgacctcctcctgtagtagcgaggaggagaggagaggagggagaggcgggttcttggctcctggggggccgaatcgcgggggttcttgcctgcccggatcgatccggcaatggatgcggctgccggaggcgcgccgccgcggcccgcggccggaatccgcgtccgggtgccactggtgagttccgtccccctaatcttctctctggccctagaggagcgtcgcttcttgttttgaggccgcaggtcgcgtgaatttagctccggggtagtgttcttggcccaaaggcgtcaacctttggctgccaagtgctgaatctaagggttttcctgttcatgccctggcgtatttgtgggtttttgatatggacgagggctcgatctgcgttcttagggcttggtattggagtataggttccaattatctgtgaatgcgtggtagttatttttggtgaagtaatctttgctgtgctgatgccacttcgtgagtttttgctggtcaaaatactgctagatggacaatttgtatcagtatgggatcaccaaatttgttcgtcccttcttttgtccccatttaaaagctagcatataatattttttttctcatcatagtcattttttagggatgaattaaggaggaagtagcactagcaaatcatcctattcctagctccatgtgtcacacatgagctacacaagcgtctgatccattgctagacattctttttgggaatacgcaaggagcgcatttttgtatcaagagaaataaagagttatttacaaacattgctagacattctgtgcaatgtatgtgaatttgtaaggtttgcttactagttataacgaccaagccaatcatgtacatatgaactgctgagcatgacgaacactactctagcatagctagtaactctaatataatgatgctagtatgagattagcatccataatagttgaaccaggaaatggtcatgtaaatataatggccagactaggtaggatatcctgggtctcttacactgttatacatttggtatgccagccgtgctgatgtttgtaacgtttgatggatgcaatatcaattttaggaacctttagactgtacatcagatttgtctctctttgtctcttacaaattgacagagaagcacatagcaaacatacattaaaagtgctactaaaattctctgtctctttgttgaactaattatcgccaaagaaggctggcatatgcaataagaagtaaaattcagtacattattctgcttcaataaaagcagggtcctttgaccattagtctaagaaaaatttcagtacattaaaaagcccaagcgtttcacaaatcattaaatgaaatgccaaacaaatcaagacttgcccccttctctcccccaaaagaaaacctctacaagaccaaaccatgtgcgcgctggatggggtttaccggtttgatataaaatcattattctcctgcttttattgaggcttttttatagagagagtttctcggcgattttctttgtgagatgggttcagcacaaagagagtgtgtgaatccattcgccagtgtaactcgtgtgcttcgatctctggtgagtcacatgacttcgatcgtgtgctttaataaaaacagtggttgagggtgtcatgtgtttggggttagagtcaggggttattccactattggtctgaagttgttttttttttaatgaatggtatgattttccactggatctaggaggatttaccttaccatttggggagggattacccctacctggtgttatcacagttactgtggtaatgtcatggttaccgcaaaaaccgagaggttttaaaaaccaagaggattattgtgcgaggtaaccgttgtaaccgagcagtagccgcactgccgcacgatattgcaaacctgattcattcctactaaaagttgttttttttttaaaaaaatattggtgatttgtttgtggatctagatctgtagggttttaggaacttaaggttactttctttagttttggtttaagttaaagatggagataattgctatcctaaaccatcctttcttgtgaactcatttgttgggcttttcattgtcacttttatcaatcttatagatgtcatctaggtgctcttcctcggttagaaacaaagcctttttacaagaataattttacatgggaatttcatttgggcactaaaaatttagagaactttctctctcctctgcatgataaagtaatatatgtggatccatttgatgcatttaaatatgttagcagagcagcttagcaatatcaatgcatgatttttctatattttatcaattgatactagtatatgacaggccaaacctaccaaggtggtagctgtaggggtgtaagtgggtcagccgcgaacccacttataggtcaaaataagtgggtttcgctggttgccacttacacccctaggtagctgcaagtgctcatgtcacacttaaaaatggcttatacaaggagtttaatggagaaaggataaaccaaagcctgtacctttaacatctagtccttgtatccataagttagcaaaagacattctccaattccgttcctatacagtagagcgatcatagtgaatagtgacgatgatgagcctgctatcccaccatcacctccagagttggtgggatcttatgcgagtgaacaaatagatcacttatgcacatggtttggctatttgtggattgatgctcggttgcaagttatatatattcccccctgattaatatacatataattttcgagtttagaaacttacggtatacttttgtggaatctgttgctaacgcatgggtattttgctagatatataagaaagataaacatcatgcaatgcaatcgtcacactattttgctagtgcctggacagaaagatacgtttgtgtctttaggagagttacttcttgtggttttgtttcacttatgctgttccacattcaggttagtataagcatatcctaacttcatttaccaatgcatttgcaggtagagtctgtgtcttgttactgtggttttgtttcacttatgctgttccacattcaggttagtataagcatatcctaacttcatttaccaatgcatttgcaggtagagtctgtgtcttgttactgcagggtagatggaggtcttaaaactgttgtgagtgctaggaagtttgtccctggtgcaaagctgtgcatgcaacctgacattaaaccaaacaagcgcaagtcaaggagctcacacaaagagaggtgccgaactcaggcaccacttctacctggccttcctgacgacctagctattacctgcctcatgcgggtccctcgacttgagcacacaaatcttcggttagtctgtaaacggtggaaccgactgttatctgggaactattattattccttgcgtaagaaacttggcatggcagaagaatgggtttttgtcttcaaaagggaccgtgatcggaagatttcttggcatgcctttgacccagttcaccaggtgtggaagtcactccctccagttccagcagagtattcagaggccgtgggctttggctgtgctgttcttagtggctgctatctgtacctgtttggtggcaaagacccagtccgagggtctatgaggcgtgttgtattttacaatgctcggataaacaagtggctccgagccccagatatgctacaaaagcgtcactgctttggttcctgtgtcataaacaaccgcctctatgttgctggtggggagtgtgaagggatacaaagaactctaagatctgctgaattttacgacccaaacaggaatagatggtcttacatcagtgaaatgagcacgggaatggtaccttttattggagttgtatatgatggcaaatggttcctgaaagggcttgattctcatcgtcaggttgtgagtgaggtctatatgccaacatccaacgtatggtcagtcactgctgatgaaatggttacgggctggcggaatccaagcatttgctttaatggacgtctttattcagcagaatgccgggacggatgcaagcttagagtctatgatagggacacacgatcgtggaccagattcatggacagcaggcgccatctgggcaattcacgagcttttgaagctgcagctctggtctccctaaatggaaagatctgcattatccgcaacaatatgagcatcactcttgtcgatgtctcaaacacaccaacagttatcgagattaacaatgctcacatgtgggatgtttttgctcggaagggccagcacaggtctttcatagcaaacttgtggttcaccattgcgggtcgtaatttcaagactcacattatccattgccaagtgctccaagtttgagcatggctccatgtgaagttggaaactgggaacattctcaaattttgaaagggccgatcaatcggaagctgaaatgggtgccagaactccagcaaagagatggtctgttgcctgaatgaacatctagcgatctcgttcctactcaatctctccggtaccggaaaaatctcatgctggctgctggatgcagccatgcaggagaggaagtgggagcttcggttgtctataaaccaaggtgaaattttttggggtgtgagagtaagaaatattccatagcatcggtggtttgtccagtggtattcatgatttcagtgtgctgatgcttcctggtttggggttgagctgatactgctgatgatacggcagtaatggttgcattggcggctgtcatgttctacattttcggataggaaggtggtccaccttcatcctaatcatcatgtctatctttctttcggcttattaggcatgtcaaactgtgttgtatgatcgtatcagccgactagagtaacaaatgaataaatgttttgttcaactgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0167800, RefSeq:Os03g0167800