Os03g0168000

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Revision as of 12:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0168000| Description = Conserved hypothetical protein| Version = NM_001055621.1 GI:115450970 GeneID:4331750| Length = 4030 bp| Definition ...")
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Gene Name

Os03g0168000

Description

Conserved hypothetical protein

Version

NM_001055621.1 GI:115450970 GeneID:4331750

Length

4030 bp

Definition

Oryza sativa Japonica Group Os03g0168000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3652621..3656650

Sequence Coding Region

3653177..3653340,3653493..3653562,3653663..3653859,3653958..3654033,3654343..3654426
,3654796..3654875,3654971..3655097,3655276..3655335,3655423..3655473
,3655562..3655720,3655845..3655977,3656094..3656266

Expression

GEO Profiles:Os03g0168000

Genome Context

<gbrowseImage1> name=NC_008396:3652621..3656650 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:3652621..3656650 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgacgcgaagggcgacgaggtgttggcggagggacagatgcctctgggacggtggccgatcctgtcctacggtgtcggccacatgctgaatgacatcacgtctgcctgctggttcacttacctgctcctcttcttgcaagaaatcgggcttgctccaagggatgcagctattgtgatgctttctggccaggttgcagatggcctaatgacgattcttgcaggcgagatgatcgaccgatttgggcacttcaagctgtggcacatcggaggatcaatcctagtcggcatctccttctcctctgtcttcggtggatgtcttctctgcaccgtcctggggaccgattcctaccttgtgagaaccattggttacagcttcttcgctgccgtcttcaacatcggctgggcggccacacaagtttcacacatgtcaatggtgaactgcatgacactgaattccacaagccgggtagccttagcaagctgcagaaatgcgttcactatggtggcaaatcttggtttatatgcgatagctttggttgtatttgctttagtgagcgcgaaggcatgctcagacattgttcttcagtaccgttggatagcgtacgtttcaatttttgtgggatgctgcttcctagtggtgttctatgctggaacaaaggagccgactttgcagtcgggatctgactgcaagaaatcggctaggatttcctggggctactggttcaagaaggccttgtactaccaagtcgctctgttgtatatgcttgcaagattgatcacaaatgtctctcagtctctcatcgcgttctacgtcactagagacttgaagatgaatgagtactccaaagcgattataccagccatcatattttgctgcagcttcctcgtctctgttgttctccaggagataaagtggaacagccgccgcctgaagtcgctcctcaccatcggagcaatactctgggtgatcgctggagccgccgtcttcgtcctcccgagtcagatgcacaaccttatgtaccctctcgctatggtcatcggagctgcaaacgccctcgtcatggtgaccacaattgggctagagagcgcgctggtaggagacgacttgaacggctgcgccttcgtctacggctcgctcagcttcctggacaagatgtcgtgtggaatcgccttgtttgttctagaatcatacgaagattcgattagctgcggcgagacgagggggctgtacacggtgagcaggtttgggacaggtctgatcccctcgtgctttgcagtcttcgcgctgctggtcacctcaaccctgaagctccaggacaccaacccgagagctgccgccgctgcactggaagctccactcctcgtctga</cdnaseq>

Protein Sequence

<aaseq>MADAKGDEVLAEGQMPLGRWPILSYGVGHMLNDITSACWFTYLL LFLQEIGLAPRDAAIVMLSGQVADGLMTILAGEMIDRFGHFKLWHIGGSILVGISFSS VFGGCLLCTVLGTDSYLVRTIGYSFFAAVFNIGWAATQVSHMSMVNCMTLNSTSRVAL ASCRNAFTMVANLGLYAIALVVFALVSAKACSDIVLQYRWIAYVSIFVGCCFLVVFYA GTKEPTLQSGSDCKKSARISWGYWFKKALYYQVALLYMLARLITNVSQSLIAFYVTRD LKMNEYSKAIIPAIIFCCSFLVSVVLQEIKWNSRRLKSLLTIGAILWVIAGAAVFVLP SQMHNLMYPLAMVIGAANALVMVTTIGLESALVGDDLNGCAFVYGSLSFLDKMSCGIA LFVLESYEDSISCGETRGLYTVSRFGTGLIPSCFAVFALLVTSTLKLQDTNPRAAAAA LEAPLLV</aaseq>

Gene Sequence

<dnaseqindica>557..720#873..942#1043..1239#1338..1413#1723..1806#2176..2255#2351..2477#2656..2715#2803..2853#2942..3100#3225..3357#3474..3646#gtcccgcgctctctcctcccctcctcgacgaacagcaagcgcgcgcgctctcatctcggtacgcgtgcgaaattcgcgaatgagattctgaaattccctcccgattctcgcattccttttgctgctgttgccgccggcgtcgccgtgccgcgggttcatatgcattgccgtttttcttggggggattttacgacggcggccgcggcgcggcaacgtgtagccctagcgcggctagcgcgggcgcaggacggcggcgagttgagcggaggggacgcggctgcacgcgcggcgcggggcggcacgcgtcgctcgcgtgcggtgatcccgcgcgcgcgcggcggcgccggctggcgtgaacgcaagcttacgcatgatcgccatcaaataaaagtcgctttttcctttttgtcatgcatctcatgaggcgtggaattattccctgtctgttgctaatgtgtgcaatcacctctgcatattcagagatcgtagctgaagattacacattgggaaactggtgtactgcctgcctctgcgatcgatcgatcgatcgatcgccatggctgacgcgaagggcgacgaggtgttggcggagggacagatgcctctgggacggtggccgatcctgtcctacggtgtcggccacatgctgaatgacatcacgtctgcctgctggttcacttacctgctcctcttcttgcaagaaatcgggcttgctccaaggtaatcattgctaattaattaattaaacccacgtagacaacagctcacaatcacactagtggtctgtgtggaatttcgatttgtctgaagcaaagtaatgttgctgcagcagctcagtttattaatcatggcttgtgttcaatttcttgcagggatgcagctattgtgatgctttctggccaggttgcagatggcctaatgacgattcttgcaggcgagatggtactaaataaattgagaaaccgtttgctattgctgaatgcgcgctgattagcaaaatacagtaactgatctgtgagcaatgtatgtggtatctgatcagatcgaccgatttgggcacttcaagctgtggcacatcggaggatcaatcctagtcggcatctccttctcctctgtcttcggtggatgtcttctctgcaccgtcctggggaccgattcctaccttgtgagaaccattggttacagcttcttcgctgccgtcttcaacatcggctgggcggccacacaagtttcacacatgtaaatttgatcacttgaactttgacagaagcttctatctaatttgcaatatgtttgggctctggcttggcatagtgacatggttttcttcctctcaggtcaatggtgaactgcatgacactgaattccacaagccgggtagccttagcaagctgcagaaatgcgttcactatggtaagtactacagttttagcatggaaacatattattactagaatactctttttttacttaaggtatctccgggaaatttcttccactgaactcttgttattataataaccttttgcacatgacaaagtgcattgtttctataccaaagatggtagtattcttttactgccatcttttatctgattgaaggtggcctgatatgtgcttcaaaaataattcctacttgtttagtctcctgtgtcttgtaccactgcaatcattgttctcatgaggaagatgctcaccagtcactacaaatggaaaatgcaggtggcaaatcttggtttatatgcgatagctttggttgtatttgctttagtgagcgcgaaggcatgctcagacattgttcttcaggtgactgcctaacctcgtcagttgttagatttgggtttcttggtcagtaaaagatactccctccattttttaatagatgacgccgttgactttttctcacatgtttgaccattcgtcttattcaaaaaatttacgtaattataatttattttgttatgagttcttttatcactcatagtactttaagtgtaatttatatcttatacatttgcataaaatttttgaataagacgaatggtcaaacatgtgagaaaaagtcaacggcgtcatctattaaaaaatggaggtagtatgattttacagaccagagacttacctccatgtacaatagtatacttgttactaagttgttcgtatatttatctgcagtaccgttggatagcgtacgtttcaatttttgtgggatgctgcttcctagtggtgttctatgctggaacaaaggagccgacgtatgtttttcttttttcagcgtagaataatgcattagacttttttttgggccgtgaagggtgttttctgaaagggagtgaatttggttttgcagtttgcagtcgggatctgactgcaagaaatcggctaggatttcctggggctactggttcaagaaggccttgtactaccaagtcgctctgttgtatatgcttgcaagattgatcacaaatgtctctcaggttgacatcgtccccactcagaatagaaaatattcttaattactactagcaacatgaaaatgcacattgcatactctaccatatctgttccactgtgacactgattgccaaatacgcatttcgctccctaagttttctctcaagtctgaacattagtctaaaagaatttttttttcagtctctcatcgcgttctacgtcactagagacttgaagatgaatgagtactccaaagcgattgtgagttttcaaacctttttggttaacctctgtccttagaagataccaatcatctaattctctaatttttgacctgcatatatgcagataccagccatcatattttgctgcagcttcctcgtctctgttgttctccaggtctactcctgtcagttaacccacttatactagaactagaatataacaagttaagttttttctcacgtattttgcaagtaaaatgcaggagataaagtggaacagccgccgcctgaagtcgctcctcaccatcggagcaatactctgggtgatcgctggagccgccgtcttcgtcctcccgagtcagatgcacaaccttatgtaccctctcgctatggtcatcggagctgcaaacgccctcgtcatggtaaagaacaacaagaactgcacttctcatttagagaacaagaactgcaattgtcatttttgcgtgatgggacgaatgatcttcgagttctgcttatgctcatgtgtgctgatttcctgatcaggtgaccacaattgggctagagagcgcgctggtaggagacgacttgaacggctgcgccttcgtctacggctcgctcagcttcctggacaagatgtcgtgtggaatcgccttgtttgttctagaatcatacgaaggtatccgctgtaaaaatggcatatttcagcgcattaaccacctaaattcaggatgctttggtttgtggatacaattgatgatcactcattgaaattatgtttctctcttattgcagattcgattagctgcggcgagacgagggggctgtacacggtgagcaggtttgggacaggtctgatcccctcgtgctttgcagtcttcgcgctgctggtcacctcaaccctgaagctccaggacaccaacccgagagctgccgccgctgcactggaagctccactcctcgtctgaagcacgcctccgagtgtgcttctcttaaactacaggacaccagaaaaatcgactgtatgtatcactgtatgtatcacgggaagaagaagaagaacatacataagatgaaattgcattgcagaaccctcttcagttcggtctgaagaggtaagctgcagtctgaagaggtaagctgcagcgtgatagtgtctagtaagattcagaattctggcccgaatcttaaaccttcgatgcttgtaggcagttagaaatgatctaatcagctctgttactgcttcttttcaattagatttgaaaaggtccaatgcttgtagcaatctgtaccagtgttgtatcaaagattcagtttcgagtgaggtttccgtggaaaacagcaaaagattc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0168000, RefSeq:Os03g0168000