Os03g0170500

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Revision as of 12:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0170500| Description = Conserved hypothetical protein| Version = NM_001055644.2 GI:297600398 GeneID:4331773| Length = 3260 bp| Definition ...")
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Gene Name

Os03g0170500

Description

Conserved hypothetical protein

Version

NM_001055644.2 GI:297600398 GeneID:4331773

Length

3260 bp

Definition

Oryza sativa Japonica Group Os03g0170500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3752594..3755853

Sequence Coding Region

3752594..3752792,3753359..3753431,3754918..3754982,3755300..3755853

Expression

GEO Profiles:Os03g0170500

Genome Context

<gbrowseImage1> name=NC_008396:3752594..3755853 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:3752594..3755853 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgccgccgtcgtcgctgccgtccaccgccgccgccgccaccgcttccgctgcgtttctccggccgtcagcgagcgcgcatccagcaagcgcctccgccccgcccaacgccgccgcgtgcctcaggcgctcgccgcggcgccgcctggtcgcggcgcgtgccgcggccgacggcggcggcgccgagacggtgttcttcgacggcggcgcgcactacggcgacctggcggcgaacctggccctcgggctgacgctgctgtggctaccgctgacgctggcggcggtgtcccgcgccttcatcctccggtaccgcttcacctcccgccgcgtgagcgtcatctccgggctctccggcgccgaccgcaccgacttcccctactcgtcggtgacgtccgtggtggtggtgccacggttcatcggcgagtggggcgacatcgtcatcaccctcaaggacggcaccaaggtcgacctcaggagcgtgcccaggttccgcgaggtcgccgactactgccgctccatggccgccgccgagggctccctcgccgccagcacgtattataacggcgtgatccgtagttgggatcgttgggccttggatctgccactgagtgcaccttgttcagtgcaatcttctgaagaaaacttctttcaagaaactgacagaccattcctgaagaacagaccaaacacgatgcatgttcaggctgcattcagatcatcaacactaacagcaaaatctggttcatataatagcagtagattggtcttcctccaatggtggataagacgagtattagaagtacggatgcaatgcatctgtgaaaacaaaactgaggctgctgcaaccaaaaaaaggtcagtgaggtccaacaacgtgcatcagccataa</cdnaseq>

Protein Sequence

<aaseq>MPPPSSLPSTAAAATASAAFLRPSASAHPASASAPPNAAACLRR SPRRRLVAARAAADGGGAETVFFDGGAHYGDLAANLALGLTLLWLPLTLAAVSRAFIL RYRFTSRRVSVISGLSGADRTDFPYSSVTSVVVVPRFIGEWGDIVITLKDGTKVDLRS VPRFREVADYCRSMAAAEGSLAASTYYNGVIRSWDRWALDLPLSAPCSVQSSEENFFQ ETDRPFLKNRPNTMHVQAAFRSSTLTAKSGSYNSSRLVFLQWWIRRVLEVRMQCICEN KTEAAATKKRSVRSNNVHQP</aaseq>

Gene Sequence

<dnaseqindica>3062..3260#2423..2495#872..936#1..554#atgccgccgccgtcgtcgctgccgtccaccgccgccgccgccaccgcttccgctgcgtttctccggccgtcagcgagcgcgcatccagcaagcgcctccgccccgcccaacgccgccgcgtgcctcaggcgctcgccgcggcgccgcctggtcgcggcgcgtgccgcggccgacggcggcggcgccgagacggtgttcttcgacggcggcgcgcactacggcgacctggcggcgaacctggccctcgggctgacgctgctgtggctaccgctgacgctggcggcggtgtcccgcgccttcatcctccggtaccgcttcacctcccgccgcgtgagcgtcatctccgggctctccggcgccgaccgcaccgacttcccctactcgtcggtgacgtccgtggtggtggtgccacggttcatcggcgagtggggcgacatcgtcatcaccctcaaggacggcaccaaggtcgacctcaggagcgtgcccaggttccgcgaggtcgccgactactgccgctccatggccgccgccgagggctccctcgccgccagcacgtgaggtcagctgggaggcgattgctctgctcaagtgtacacttccttcttcttcttcttcttcttcttcttcttcttcttcttttttttaatcgtgatgaatctaattattgaagaactgtgaaaaaagtcgaatatattttgatttttttcccaatcttgacgaatctgatgtctagccttttggagatgttgataaagtaaagtgtgcgtgagttcgtaaagatgagtgcattgacacatcttgttactttttaaagccggaacaaacacatatgtgaacaattatatacactgttaatcactaaaaatttaaggtattataacggcgtgatccgtagttgggatcgttgggccttggatctgccactgagtgcaccttgtgagcatctgtcagctctatcgtttggttttttcatggaaacaaaaaataatttgtgaataaaaattttatatcatgtgttcttagcgatctaaagtaaagactgaaaagtaaacttgatgcaaaaccttaaaattagtttcaaatttaaaattgaaaatttaaatgttgtccgataagcataagctaaaagatgatgcatactttctgaaatgagaaaacactcgccgttccgggcatagttgttgggaacttgggccgtaagtccataacggagctgtgacttacgtgcggcccagaacggactgtcacttacgtgcggcctaattttgttgggccggaaaacggggagtgtggcttaacgtgcggccccatgatttcgtggaccgagccatacttccttttctgcgaatgtttatgggccaggccggaatatggccgcccgtaccacttgatctctcttcttttcgaggagaacacctaacagtatttgattcctgccacgatttgtaattaaaaatgtctacctttaaactttaaaccacttttaaaaggctgattcttctcgcacaatctagaaaaatgtatgtgtgtgtttgtggcaattctactggcgatggcaattggcaagtgaagatgctccagatgattgggtgtcagtcgctgccacgccggtggtagtggaacggtctaaccatgggtatagtagctcagctagatcaaagctctcgctttcttcgattccttctttttttctctgcatttttgccccttctcgtgtggtcgttcagcaatgtcaactgcatggtgcggtgtgtcgaaaagcttttggattaatgcttcctatgagctaatggctccatgtcgacttgtttaatggctgttaaattggtgagttgtttagcatatctctgacgctttgtttaatcttttccttttatggatttgactaagcaaagcaaagcacctttgggtttaattgccgttcatataaaattttctctcagcatagcaaagccatgtaagtagtgcaacgctgcctaactcaactcgatctcatccatcatccaatctggaaacagtgacagtgaaactgtaatagtagtaataatacgagttaaacaacaagaagccaactgtttatcggcaattgctgcaagaaagagagatgacaagcttaagaaagttcttgcaagcagaattctgcaacctccatcttctagaacttgacggattctcgttcgtatcctctccttcacccgtgcactcgtgcagaactgtttcttttcgttggctccgtcttgtagtggatgaggaatgggggaatttcaggctttgaattgctggctgacatatcgctcaatgaacggatcaggccgtagctgggagttggaattgattcctgctgctccccgtgactcgacatgaatcaagccaaaggctttaccaagtccatggaacgcagccaatttgttttgttcttcaggttcagtgcaatcttctgaagaaaacttctttcaagaaactgacagaccattcctgaagaacagaccaaacacgtacgtctatgtcagccacagatttcaggttttattcatgcaccaggataactgctgatgagatcatatgatcccacaataactgtactgaactgctaccatgtgacactacgagatcgagacgaaagaaggatcaaagcagcaggatctgcgtctgtttctgtcattcccttgagtgcacagcgcattgcagtctgcagaggacgggagtgttctcaggctgagtgtaataatgcttccattattttttttataaaaaatgacagagcatcacctagaagaataaaaggttggatgcagaaatagatcagtactgaatactgatttgtttgtggctgcaaacaaaagataattttgttgctctctctctctgaaaaaaagaagaagaagcatcatgtttgtgattcttgtcccttttgggtagaatcatttctactagcactctagctatgcaactttctttgtgccctgcaattttcagtgggttattaatatataatctatgcgattatgagaatggactacctgtctgtgggatctatgtttttctttgatgaaatctgtaggatgcatgttcaggctgcattcagatcatcaacactaacagcaaaatctggttcatataatagcagtagattggtcttcctccaatggtggataagacgagtattagaagtacggatgcaatgcatctgtgaaaacaaaactgaggctgctgcaaccaaaaaaaggtcagtgaggtccaacaacgtgcatcagccataa</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0170500, RefSeq:Os03g0170500