Os03g0174100

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Revision as of 12:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0174100| Description = Similar to RNA Binding Protein 45| Version = NM_001055659.1 GI:115451046 GeneID:4331788| Length = 4268 bp| Definiti...")
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Gene Name

Os03g0174100

Description

Similar to RNA Binding Protein 45

Version

NM_001055659.1 GI:115451046 GeneID:4331788

Length

4268 bp

Definition

Oryza sativa Japonica Group Os03g0174100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3948577..3952844

Sequence Coding Region

3948578..3948766,3949680..3950163,3950491..3950567,3950640..3950770,3951411..3951507
,3951823..3951966,3952306..3952409,3952503..3952593

Expression

GEO Profiles:Os03g0174100

Genome Context

<gbrowseImage1> name=NC_008396:3948577..3952844 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:3948577..3952844 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ccgccgcgcctccgcctccgcctccgcctcaagccgccgcccgccgccgccaggagcggcctctccatggcggcagcgccgtaccaccagccgaccagcctggaggaggtcaggacgctctggatcggcgacctccagtactgggccgacgagaactacctctacaactgcttcgcccacaccggcgagttacaatctgtaaaaataatacgtaacaagctaacaagccttccagaaggttatggattcatagagttcatttctcatgaagttgccgagaaagttctacagacttacaatggcacacaaatgcctggaactgagcatacattcagattgaactgggcctctttcagctctggtgagaggcgtcctgatgcaggacctgatcattcgatttttgtgggagacttggcgcctgatgtcacagattacttgctacaggagacattccgtgtgagctatccttctgtcaaaggggctaaggttgtcacggatccaaatactgggaggtccaaagggtatggatttgtaaagtttgcagatgaaaatgaaaagaatcgtgcaatgacagaaatgaatggtatgtattgctcaacaagacctatgcggataagtgctgcaatacctaaaaaaaccactggatctcagcttcagtatggagctgctaaagccatgtatccagcagcaggttatgcagttccgcaagtccaaccagttctaccagatagtgatccgacaaacaccactatatttataggtaacttggatcagaatgtgacagaagatgaactcaggcagatctgtgtccaatttggggagcttatatatgtaaaaattccagccaataaagcttgtggatttgtacaatatgcatctcgggcatcagctgaagaggcagtacaacgtcttcatggcacaacgatcggccaacaagtagtcaggctttcatggggcaggagtcctgcgagcaagcaggatcaatcagctgtctggagtcaacaagctgatcctaatcaatgggcaagtgcttattatggctatggatatgatgcatatggatatgcccaggacccatcatatgcatacaattcttatgcaggatatacccagtacccccagcaggttgagggagcgaccgatatggcatcagcagctggaagccatgccccaggaatggaaaaggaggaggtgtatgatccaatgaacttacctgatgttgacaagttgaatgcgtcgtacatcgctgttcatggtagagccatgcttgggcgatccctgtggttgagaacttcatcattgcctcagtcagcttga</cdnaseq>

Protein Sequence

<aaseq>PPRLRLRLRLKPPPAAARSGLSMAAAPYHQPTSLEEVRTLWIGD LQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVAEKVLQTYNGT QMPGTEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRVSYPSVKG AKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGMYCSTRPMRISAAIPKKTTGSQL QYGAAKAMYPAAGYAVPQVQPVLPDSDPTNTTIFIGNLDQNVTEDELRQICVQFGELI YVKIPANKACGFVQYASRASAEEAVQRLHGTTIGQQVVRLSWGRSPASKQDQSAVWSQ QADPNQWASAYYGYGYDAYGYAQDPSYAYNSYAGYTQYPQQVEGATDMASAAGSHAPG MEKEEVYDPMNLPDVDKLNASYIAVHGRAMLGRSLWLRTSSLPQSA</aaseq>

Gene Sequence

<dnaseqindica>2..190#1104..1587#1915..1991#2064..2194#2835..2931#3247..3390#3730..3833#3927..4017#accgccgcgcctccgcctccgcctccgcctcaagccgccgcccgccgccgccaggagcggcctctccatggcggcagcgccgtaccaccagccgaccagcctggaggaggtcaggacgctctggatcggcgacctccagtactgggccgacgagaactacctctacaactgcttcgcccacaccggcgaggtaggtttacacgctgcgctcccatgccgcgcgcccccgatgaactaattccatggttctatcttagttcattcgttaagctagggttcctatttaggcgttggattgacgctttgtccccccccccctctcggtggtaagggttggatgggtttagggagctagggttgtggagtggccgtcacgttttgagatcgctaattaagaaggttacatgtttccctttactagaattagctacgcagttgtcaatgtgaattgggaaaaataggctgtttgtgttacaagcctgaaaagcctcatttgctcaagtgaagtaccgaagtgattttttgcttgtcatgtttgttgaatcatgtcattgcaacagtagtgatttacttcatataaaatccagtaaaagttactcgttttgctggcaatctggcagcagtactgttctagagttatgcacaaatataattatctttttgttatatacttatgtcagaagcaatggaggttttatattttgtaataggcaacaagaagttagatgctctatggactttcatagctcagatttgctaccggatgcatgagtaacatggtgctaagattttaattaattgttgtgatacagtaaaattttcctcgaaattttataccttgacatcctatatgaattatgaaactcgctaatagttggatttatgattcatcctcttcctttgttttatttggcctagagtagaaaatatatgcacattaacttttatatcatatatatatgcaaatttattgcaatattaaaccttatcatgttgatttcaaaccactcttgaggattaccagctgccattttgtcctattgaatatataagagtaccatttgcaatcaacagtactaagaattgtttatttggaaccgcagttacaatctgtaaaaataatacgtaacaagctaacaagccttccagaaggttatggattcatagagttcatttctcatgaagttgccgagaaagttctacagacttacaatggcacacaaatgcctggaactgagcatacattcagattgaactgggcctctttcagctctggtgagaggcgtcctgatgcaggacctgatcattcgatttttgtgggagacttggcgcctgatgtcacagattacttgctacaggagacattccgtgtgagctatccttctgtcaaaggggctaaggttgtcacggatccaaatactgggaggtccaaagggtatggatttgtaaagtttgcagatgaaaatgaaaagaatcgtgcaatgacagaaatgaatggtatgtattgctcaacaagacctatgcggataagtgctgcaatacctaaaaaaaccactggatctcagcttcagtatggagctgctaaaggtaattcttgtcttataatatactactattctgttagttctgatgcaactcacgatctcactactacatgttatttttagttgctctgttaatatgtactcctgcttatgaggcatttatgacagatcacgttcttgtgagctcgtattatttctcctattagcagtaataagatagagattcatctgtaagtggatttctgcagtgattcatttatattggcagacaatgcagcatatatcacaattcacaagtgtataattcatttccatagacaggtgcttttcttgaatttgttttaaccacctgtgttattttgatatgtagccatgtatccagcagcaggttatgcagttccgcaagtccaaccagttctaccagatagtgatccgacaaacaccactgtaagaacccttatcatttagcctgctgtttgcactgttgagtatgcaatttaccctgagacacatttgcagatatttataggtaacttggatcagaatgtgacagaagatgaactcaggcagatctgtgtccaatttggggagcttatatatgtaaaaattccagccaataaagcttgtggatttgtacaatatgcatctcggtgggtaatcttgctttaatttaataaatggacattctgtgctgtatgttctttcaagtttcaacttttacagaatcaagctttcacagaattagttaggaggcttaacttataatggcatcataggtggctggttactttaaattaataaatgaagcatacagagaagggtatcattcgcggtctaccttgtataattttcataaatacacccaataatgaattatatcgaaggaaaacctttgaaactcatagaactatatcgaaggagaacctttgaaactcgtagattcatatgccactcggtgaactgaatacttaaataaattttatacctaggaaaagatgtataaaaaattagtaacagactgaatgatttatgcctgtagcagggactcattgaatcagtttgtttttctaggtatctgcatacattgtaggcaaaactttgatacctcagacactcaggtgcaaatgttgctctgcatttataacttaatagaaaggaacaaaatgttacctttggtctgatgtgttctttttccacttaaatattggacgattaggcaatgcatttcttggcctctttgcgagcatgggaatttgtttggatgatgtgaacgatgtgtaactgtttcagggcatcagctgaagaggcagtacaacgtcttcatggcacaacgatcggccaacaagtagtcaggctttcatggggcaggagtcctgcgagcaagcaggtaatctcattaagtttctatatcacaaacctaatgctcaataaatctctttaacctcagacgccttgaaatccacttaaaccaatatactaattgacaatgcaaattatactatataagcatgcaaaagaagaatatattaattgtagaagaacgcttgtatccccagtatattgttcttgtttagtctaactgattaagggcatacttgtttgacctttcttctttggtattttctcttcatgttcttttctgattttgatatctgttctattttgctttatctcttggcatttcatcaaattttgtatgcaggatcaatcagctgtctggagtcaacaagctgatcctaatcaatgggcaagtgcttattatggctatggatatgatgcatatggatatgcccaggacccatcatatgcatacaattcttatgcaggatatacccagtacccccagcaggcaaggatttcaattaatttcacattcattcacacctgaagatttttttttctagtagtacagaaattttgccttaagctaaagatgttgggtccagaaagtgtatatgttgaattatttgacttgttcctgccagtatgctatcaccattagtatgctatcacattgattcatcttgagaataatggctgttttatctgccatcttctgatatcgacaaacttaggatgtttcacctgcttgacaatgagacatgataagaatcggctaacataatatctactgcactcgatttccttttgaacttctgattgaattagcaatcttgcaattttccaggttgagggagcgaccgatatggcatcagcagctggaagccatgccccaggaatggaaaaggaggaggtgtatgatccaatgaacttacctgatgttgacaagtacagttccacttatctcacttccccctttattttatatattactacattgatgatgtgtcctaatccacgcactgctctgtttaaatctaggttgaatgcgtcgtacatcgctgttcatggtagagccatgcttgggcgatccctgtggttgagaacttcatcattgcctcagtcagcttgagcgcctatttatcactcctcgttgccttttttactgaagactgcaatgccagtagagccagttggtagtttgcaaaaacggagaaactgtgacaggctgactgacagcttaatgtatgttgatttgtcatcacatgtatgattagggaaccccttttgctgagcctcttctaagtgaacagattactgccaatgatgcggctactttatgatgccaagttactggatgaaaatcatcagaaaaaaaaattc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0174100, RefSeq:Os03g0174100