Os03g0174500

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Revision as of 12:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0174500| Description = Similar to Adenylosuccinate synthetase, chloroplast precursor (EC 6.3.4.4) (IMP-- aspartate ligase) (AdSS) (AMPSase) (...")
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Gene Name

Os03g0174500

Description

Similar to Adenylosuccinate synthetase, chloroplast precursor (EC 6.3.4.4) (IMP-- aspartate ligase) (AdSS) (AMPSase) (Fragment)

Version

NM_001055663.1 GI:115451054 GeneID:4331792

Length

3143 bp

Definition

Oryza sativa Japonica Group Os03g0174500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3965188..3968330

Sequence Coding Region

3965362..3965532,3965764..3966075,3966155..3966847,3968022..3968312

Expression

GEO Profiles:Os03g0174500

Genome Context

<gbrowseImage1> name=NC_008396:3965188..3968330 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:3965188..3968330 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgctctccactgtcaaccacgccgccgccgccgccgccgccgcagcggggccggggaaatccttctccgcggctgcgcctgcggcgccatcggtgcgcctgccaaggacacgggctcctgctgccgccgcggtgtccgcggcggctgtgggggcggaccgcgcggcggacagggtgtcggcgctgagccaggtctccggggtgctggggtcgcagtggggcgacgaggggaaggggaagctcgtcgacgtgctcgcccctcgcttcgacatcgtcgcgcgttgccagggcggagcaaatgctggacacaccatttacaattctgaaggaaagaaatttgctcttcatcttgttccatctggtattctccatgaaggaacgctgtgtgttgttggcaatggagcggtgatccatgttccaggattttttaatgaaattgatggtcttgaatccaatggagtcaattgcaatggaagaatattggtctctgaccgggcacatttactctttgatctgcatcaggctgtagatggacttagggaagcagagcttgctaattcctttatagggacgactaagagaggcattggaccatgttattccagcaaggtcactcgaaacggactgcgagtctgtgatctaaggcacatggacacttttggggataagcttgatgtcttgtttaaagatgccacttcaaggtttgaaggctttgagtacagcaaaagcatgctcagggaagaggttgagaggtacaaaagatttgcagagcgcttggagccgttcattgctgatactgttcatctgttgaatgaatctatccaacagaagaagaaaattctggttgaaggtggtcaagcaacaatgttggatattgattttggaacttacccatttgtgacttcttctagcccttcagctggtgggatatgcactggccttgggattgccccaaggtgtattggtgacctgattggagtggtaaaagcttatacaacaagggttggttctgggccttttccaactgaactgtttggagaggaaggtgatctccttaggaaatcaggaatggaatttgggacgacaacaggccgcccaaggcgttgtggctggcttgacattgttgcactaaagtactgctgcgagataaatgggttttcatctcttaatctgaccaaacttgatgttctgtctggattaccagaagttaagctgggggtttcttataaccaacctgatgggcagaagctacaatccttcccaggggatcttgatactctggagcaagtacaggtcaaatatgaggtgttgcctgggtggcaaagtgacatttcgtctgtccggagttacagtgaacttcccctagctgcccaacgctatgtcgagaggatagaagagcttgttggtgttccagtccactacattggtgttggacctgggagggatgctctaatatacaagtaa</cdnaseq>

Protein Sequence

<aaseq>MSLSTVNHAAAAAAAAAGPGKSFSAAAPAAPSVRLPRTRAPAAA AVSAAAVGADRAADRVSALSQVSGVLGSQWGDEGKGKLVDVLAPRFDIVARCQGGANA GHTIYNSEGKKFALHLVPSGILHEGTLCVVGNGAVIHVPGFFNEIDGLESNGVNCNGR ILVSDRAHLLFDLHQAVDGLREAELANSFIGTTKRGIGPCYSSKVTRNGLRVCDLRHM DTFGDKLDVLFKDATSRFEGFEYSKSMLREEVERYKRFAERLEPFIADTVHLLNESIQ QKKKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRCIGDLIGVVKAYTT RVGSGPFPTELFGEEGDLLRKSGMEFGTTTGRPRRCGWLDIVALKYCCEINGFSSLNL TKLDVLSGLPEVKLGVSYNQPDGQKLQSFPGDLDTLEQVQVKYEVLPGWQSDISSVRS YSELPLAAQRYVERIEELVGVPVHYIGVGPGRDALIYK</aaseq>

Gene Sequence

<dnaseqindica>2799..2969#2256..2567#1484..2176#19..309#acctaaaaccctcgagccatgtcgctctccactgtcaaccacgccgccgccgccgccgccgccgcagcggggccggggaaatccttctccgcggctgcgcctgcggcgccatcggtgcgcctgccaaggacacgggctcctgctgccgccgcggtgtccgcggcggctgtgggggcggaccgcgcggcggacagggtgtcggcgctgagccaggtctccggggtgctggggtcgcagtggggcgacgaggggaaggggaagctcgtcgacgtgctcgcccctcgcttcgacatcgtcgcgcgttgccaggtgacgagagacgaatacgattccctttccgtggaatgcttactattgctctaatccatgcttgatggcttgtttgcttgcactactactgggtgatagaaattgatcttgcatgttaatcggaaggaatccttggaatcgaggctgttttggttgattgatgtttgatccggatggtaggctcatctgtggtagaatcatccgttcctagaaattcagcttgtttagttgtggttactatggtttagaaatcaccgcagatagcctgggtttatctctgaagtgtgtgtgcagaagaataaatttgcaacctcttatctccccctttgtttgtgggttgtagtcttgtagacgatgaatttttacatttcttgtaagttggctggggctttgtggtagtggtggcaaaagaggcctggacgtttgattatgacagcaaaaattgaactgttaaaacacgactccttttggatcaccagcaggattgactatcgatgataattcccttcatatggatgtcaaacagcttgtcataatcatgcatgtacacgctggagcaaatgttaacatccttccttgctgtagcttctgaatctagcagaaaagcatgcaattatttcattgcataagaagtacatgtgtggtgatactatgtgcaagactgcaagcgtgcagcgttgtagtttctgttgggtaaagtatttgagttgcttaactcagtcaagagatcaacctcttgggtagtttaatttaattgctggatttacttattctttttcagcatatggactagtggtcatcttttaggtaactgaagatgatattatatcttcagtctcagcagtcagcacaatagatgcacagccaaagatctcaaagtagcgggcctgttcggcaggcaggtgcagcagccagctgcagccagcccactgtttttttttattatttttgcttgcttaactgttcctgcaggctgcagcagcccttgcagctgaacaggcccaatagtgatctaattactgtcagtttattgataaccaaaagttattgttattgtcttatggtttccttatggtttccctgggagaccatatagtatgctcgacggtaccagttgtctgttggtcttaagcatggaagccttaatcttaatttctattttgtttatcatcagggcggagcaaatgctggacacaccatttacaattctgaaggaaagaaatttgctcttcatcttgttccatctggtattctccatgaaggaacgctgtgtgttgttggcaatggagcggtgatccatgttccaggattttttaatgaaattgatggtcttgaatccaatggagtcaattgcaatggaagaatattggtctctgaccgggcacatttactctttgatctgcatcaggctgtagatggacttagggaagcagagcttgctaattcctttatagggacgactaagagaggcattggaccatgttattccagcaaggtcactcgaaacggactgcgagtctgtgatctaaggcacatggacacttttggggataagcttgatgtcttgtttaaagatgccacttcaaggtttgaaggctttgagtacagcaaaagcatgctcagggaagaggttgagaggtacaaaagatttgcagagcgcttggagccgttcattgctgatactgttcatctgttgaatgaatctatccaacagaagaagaaaattctggttgaaggtggtcaagcaacaatgttggatattgattttggaacttacccatttgtgacttcttctagcccttcagctggtgggatatgcactggccttgggattgccccaaggtgtattggtgacctgattggagtggtaagttagaactattgtaactaagacctctcttctttctatcatatagcgctgagtcactccaatatttcacatgcaggtaaaagcttatacaacaagggttggttctgggccttttccaactgaactgtttggagaggaaggtgatctccttaggaaatcaggaatggaatttgggacgacaacaggccgcccaaggcgttgtggctggcttgacattgttgcactaaagtactgctgcgagataaatgggttttcatctcttaatctgaccaaacttgatgttctgtctggattaccagaagttaagctgggggtttcttataaccaacctgatgggcagaagctacaatccttcccaggggatcttgatactctggagcaagtacaggtaagcatttgggatgccattgttttctgtttgttgaatagtaaggtatttgtgtaatgtaactgtttcttgctgaattttttttatcttgttgtaagatgcaatatgattatttccatgaatgtcttggcatcaggtcttctgttaaacctatggtatttgctgttctgtactagggcttatgtaaggtttatatctttcatctctcattcgctgaatcttatatttcaggtcaaatatgaggtgttgcctgggtggcaaagtgacatttcgtctgtccggagttacagtgaacttcccctagctgcccaacgctatgtcgagaggatagaagagcttgttggtgttccagtccactacattggtgttggacctgggagggatgctctaatatacaagtaaaagcaactccatttggtcatcaattgaaccaaaatatttcagccctaacttggccttgagcgacgctcatcagtatttaccgctatttcgttggtacctgtaatacatgggaaaagctactgactggtaatgtgatgcaattgcctgcaataattctaagaatcttccaagacg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0174500, RefSeq:Os03g0174500