Os03g0176100

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Revision as of 12:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0176100| Description = Conserved hypothetical protein| Version = NM_001055672.2 GI:297600405 GeneID:4331801| Length = 2251 bp| Definition ...")
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Gene Name

Os03g0176100

Description

Conserved hypothetical protein

Version

NM_001055672.2 GI:297600405 GeneID:4331801

Length

2251 bp

Definition

Oryza sativa Japonica Group Os03g0176100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4026339..4028589

Sequence Coding Region

4026339..4026376,4026597..4026720,4027040..4027303,4027396..4027527,4027617..4027733
,4028236..4028589

Expression

GEO Profiles:Os03g0176100

Genome Context

<gbrowseImage1> name=NC_008396:4026339..4028589 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:4026339..4028589 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgattttgctcttttacctcgttggttatggaggatgattcaccatccgtcatcggttgttgatcttttaattgactctgtaaaacacaaatttgactacaatgtgccttggaactcagaatgtggcttcattaaggacacatactttgcaccaaatatggctcttcatgagcggctgaacaaatttagacagcagcaggagaggtgccagacaactctatccagtattgctgcaaaccaagcttcaactccaagatcaaatatcactcgatgggttcaaccaacaaatggtccatccactccagcaaaaccaccacagcgtaaattctcagatgatacagagaggttgcagcgcatcaattcagttaggaagtctcctgctgcagcacagatcaaaatagtaattgaattgcttgaaaagacaagacaggctttaactgcagatcaaataaatgaagcaacttatgttcatattcatggcaacaaggaggtctttgacaggttgaagaataatccgaaagtacactttgtcggcaaccttttctcttacaagtccaagtatggtgtgaacggaaaagataaactattatcgttgattagaaagtttcctgacggtcttgctgtcgcggagatcaaggatgcttatctagctgtattggaagatcttaaggctctcaaagcctcaggcgtcgtctgcttggtggcgtccaccacaaaatccgacgaaggcgtcgtgtaccccgaaattgatccaatgtcgaaaatcaagttcgacgatgacttgaaggagctggcccgttcgatattgctgccacgggacatgctggacattgagaaggagctccagaagaatggccaaccaacaaggactaacgcagccaagaggcgagcagatgcccagatccttttatatccaccaaagcccaacaagtccaagaaaaagccgcgtgggctcacgagcaggacgaagctcactaacgcacatctgcctggactttttttgggttttagattttttttttaa</cdnaseq>

Protein Sequence

<aaseq>MGDFALLPRWLWRMIHHPSSVVDLLIDSVKHKFDYNVPWNSECG FIKDTYFAPNMALHERLNKFRQQQERCQTTLSSIAANQASTPRSNITRWVQPTNGPST PAKPPQRKFSDDTERLQRINSVRKSPAAAQIKIVIELLEKTRQALTADQINEATYVHI HGNKEVFDRLKNNPKVHFVGNLFSYKSKYGVNGKDKLLSLIRKFPDGLAVAEIKDAYL AVLEDLKALKASGVVCLVASTTKSDEGVVYPEIDPMSKIKFDDDLKELARSILLPRDM LDIEKELQKNGQPTRTNAAKRRADAQILLYPPKPNKSKKKPRGLTSRTKLTNAHLPGL FLGFRFFF</aaseq>

Gene Sequence

<dnaseqindica>1..38#259..382#702..965#1058..1189#1279..1395#1898..2251#atgggcgattttgctcttttacctcgttggttatggaggtgggttagggggatgcacatacctagttaaaaaatttaactcgtttatcaaggtaaatgttgatgatcaaatgccaacctttgaattgccgcttctgaattcctgaatctgaaacccttttgtgggatatctgatgaatccctccctgaatctcccaaaattttgtgtatctactgaatctgaaatccttttgggtttgatgtttgatgctttgtacaggatgattcaccatccgtcatcggttgttgatcttttaattgactctgtaaaacacaaatttgactacaatgtgccttggaactcagaatgtggcttcattaaggacacatactttgcaccaaatgtattttataatggttatcaggaaaccgtcgggataatgattctttgcaccaactggaacttatttttgccagtcaaatggacttgatgtattgggtttggatacacattgaaacaaatgttatattgtgatatgtctacctgctgcttcaacatgcttgtgtgcgtgttacttttcgctagtgtctgcagatgtacaatattcagtgcttgtaatcttggttttattcagataatgcgggcatttctgttttctatttcatgcttatatatgtatggttgcaatgttctaaactaaatcgtgctaaatttctttatagatggctcttcatgagcggctgaacaaatttagacagcagcaggagaggtgccagacaactctatccagtattgctgcaaaccaagcttcaactccaagatcaaatatcactcgatgggttcaaccaacaaatggtccatccactccagcaaaaccaccacagcgtaaattctcagatgatacagagaggttgcagcgcatcaattcagttaggaagtctcctgctgcagcacagatcaaaatagtaattgaattgcttgaaaaggtaatttagcaaaaagttgatcgtgagagttgaacttttggccttatgacattttacctgaactgatttccctgtttttcttaaacctgcagacaagacaggctttaactgcagatcaaataaatgaagcaacttatgttcatattcatggcaacaaggaggtctttgacaggttgaagaataatccgaaagtacactttgtcggcaaccttttctcttacaaggtaagtgcatcattttgctagccatgtcaatgagtccaacacatttcatgaatcaacctcatgttaacctactgttggcatctttgcagtccaagtatggtgtgaacggaaaagataaactattatcgttgattagaaagtttcctgacggtcttgctgtcgcggagatcaaggatgcttatctagctgtattggaagatcttaaggtgagtaatgtgttgttatttaatctttgaaacctgatataaagctctgtctactagtattttactcccttgtaagtcattctagcatttctcacattcatattatgtctagattcattaacattaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagtagttcaactatttttgcatgctgtgatgatgtctgaactcagagtagtagtagttgaaaatccagcagacctagtgtagcaaagactcgagattttcaaacaagttataaattgaaactatccttccttatgtgcgcattcaagtgctgttaccctgttctatattaatccctgtactcattcccctgacattgattttaatgatttattatatggatagaagattattttcatactgtttgcatgtgatcaactgatcatctgtagtgaattcaacaaatgtgcgctccctatgatattaacttgtttttttgttctttttcaggctctcaaagcctcaggcgtcgtctgcttggtggcgtccaccacaaaatccgacgaaggcgtcgtgtaccccgaaattgatccaatgtcgaaaatcaagttcgacgatgacttgaaggagctggcccgttcgatattgctgccacgggacatgctggacattgagaaggagctccagaagaatggccaaccaacaaggactaacgcagccaagaggcgagcagatgcccagatccttttatatccaccaaagcccaacaagtccaagaaaaagccgcgtgggctcacgagcaggacgaagctcactaacgcacatctgcctggactttttttgggttttagattttttttttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0176100, RefSeq:Os03g0176100