Os03g0176300

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Revision as of 12:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0176300| Description = Similar to WRINKLED1 (Activator of sporamin LUC 1)| Version = NM_001186353.1 GI:297721836 GeneID:9268480| Length = 4...")
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Gene Name

Os03g0176300

Description

Similar to WRINKLED1 (Activator of sporamin LUC 1)

Version

NM_001186353.1 GI:297721836 GeneID:9268480

Length

4570 bp

Definition

Oryza sativa Japonica Group Os03g0176300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4035129..4039698

Sequence Coding Region

4035503..4035579,4035643..4036003

Expression

GEO Profiles:Os03g0176300

Genome Context

<gbrowseImage1> name=NC_008396:4035129..4039698 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:4035129..4039698 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>caccgcgcaggcacgcaggaggaagcggcggaggcgtacgacatagcggcgatcaagttccgcggcctgaacgccgtgaccaacttcgacatcagcaagtacgacgtgaagcgcatctgctccagcacccacctcatcggcggcgacctcgcgtgccgccgctccccgacgcgcatgctaccaccggacgctccggccggcgccgccggcgtcgacgtcgtcgtggcgccgggcgaccaccagcagatcagcgccggtggcggcggcgcgtccgacaactcggacaccgcctccgacggccaccgcggcgcgcacctgctgcacggcctgcagtacgcgcacgccatgaagttcgaggccgccgcggcgcgcccggtcgccggcatcccgaccaccgtgcaccaccagctcccggtgttcgcgctgtggaacgactga</cdnaseq>

Protein Sequence

<aaseq>HRAGTQEEAAEAYDIAAIKFRGLNAVTNFDISKYDVKRICSSTH LIGGDLACRRSPTRMLPPDAPAGAAGVDVVVAPGDHQQISAGGGGASDNSDTASDGHR GAHLLHGLQYAHAMKFEAAAARPVAGIPTTVHHQLPVFALWND</aaseq>

Gene Sequence

<dnaseqindica>4120..4196#3696..4056#gtctccgagcttcatcttgctttcggtgtcttggggagagagatcgagatggacatgaacagtggttggcttggcttctccttgtcttcttcctcggcgaggggttatggagacggctgtggtgagggaaatggaggtggagatggagatggctcgtgctcgtcgcctgttgcagcttcacctctcgtggctatgccgttgcactctgatggatctgtgcactatgatgctccaggtatgatcgagtatgatagttgagtaggtgtatacaagtgtgtttgataaaagttcaggaaattttgtgatttgttccttatgattttacctcgaggaaaacctaggcttttttcaatcatgttttcagcaaagatgagtttgtgttcaatgctcctttccccttttttttttgtaagtatgtcatattgttttttttaaagataagtactcctatgtcatattgtgaatttgttgttctagaaagaatgtttgcatgttcatcttgtcctcctccagcttgctgactcgctggtgttgttgtggtgcatatatatctttcttagttaaactagtactggtacatgaaatgccgcaaatgagagttcatctatgtcatttggagagatacggatgatctctaattaaaagttcagaatcttcagatatgtcctgtacctactagaacttgctcttccaaaggcacttcactttgttcactttattttgcactgtacttctcaactggtcctgaaagtggtatcgaacgtaggtctgcatgcaagacctcctggtccatcgcattttatgtcttcaaatcaccagccctttgatctgtacagtatttgctaaagaaagggcagcatgcatgcagaatgatttccgtttgtttttgtctcttgtttgtaccggcactgtgcagattggaggcatgcagaggccaaagaccccaagcttgaggacttcatgagcgtcagctacagcaacaaaagcagcagcaacctgtacggcagcagcagcagcagcagctgcggccacgccgaccagatcaaataccatcatgtccatgacgtccaagctttctcgacgccgtacttctacggccatggcggcagcggcgttggcatcgacatcaacatgaatgcgccaccggcaggctgcacaggcgtcctgccggaccaccgaccacctccgccgcagcaagaccatatcttcctgcctccccatggccagtacttcctgggcccaccgaacccaatggcgccggcgccgatgtacaacgccggcggcggcggcggcggcgtcgtcgacggatccatgtcgatctccggcatcaagtcgtggctccggcaggcaatgtacgtgccggaacggtcagcggcggcgctgtcgctctccgtgccggccgctcccccgagcgaggcgccgctgccgccggcggcgatgccggtggtccgcaagcccgctcagacgttcgggcagaggacgtcacagttccgtggcgtcaccaggttggtgacgacattgctgcttctccattgcttccggcgtgtctcactgatccatgtctacgtgctcatcatttttttcagacatagatggactggaagatacgaggctcacttgtgggacaacacttgcaggaaggaaggccagaccaggaaaggaaggcaaggtgagccatatcatgagcaaatttatcacctttgctactattactatccacaatgataaactgaatgattgcaacttctacttggacatgttactgacatcaacctttgcatgctcttgtttctgcaactcaccaacgagcagtttacttaggtaagatatcactactctcattggttctaaaagttcgcatgcaacttaggagtttccactagtagaattgtgaacattgttctttcctgcttactgcttcctggttgtgccatggctgtttgaaggtggctatgacaaggaggagaaggctgcaagggcttatgatttggcagcactcaagtactggggtccaacaactcacataaattttccagtaagtacagttggataacacatcgcattcactccattcctcttttcaattcaagacaatggaaataaaggatccagtaggggccggttcgtttcgttcctgcgttctttaatttgattctgatgaaatgttagtacaagtgtccagtagatgtttcatgctttttctctgttctctgaaacactgggctgtgtggcattcagttgagcacttatgagaaggagctggaggagatgaagcacatgacaaggcaggagttcattgcccacttaagaaggtactgtaggtctttctacccttctcttcatatcaatagcaccactgaatgacagagatgcaagagtgcaacaaatttgtgattcgttacaatatttaataatcaagatcctactacaataatccatgatttgttactctgaattcttttcagaatcctgaacttgatcttttttgtttgaagtaatctgaacctgaagttcactgctactagtacagaaacaaaatttgtagtaccacctaatctgacagcatgatttcactcacaaatgcatccaaaattatcaaacatccgtgcacacttgccaacgctgcgataacttacacaagttttctctgccaaatttattcttgcaggaacagcagtggcttctcgaggggagcatccatgtacagaggggtgacgaggtgccgtgccgctaccccatatctgcagactttttcatcaaccaagaacttctgggagttctgaagctctgatctcacaaacaaacgcacacacacgcatcgctgcatcgcatcgatcgatctgcttgcaattgcatgttttgtaatctctcctgttgcacttgctttccccatgcatgcaggcatcaccagcacgggagatggcaggcaaggattggaagggtcgcagggaacaaggacctgtatctcggcaccttcagtaagttttgtttcagtatacttttgttcacatgcatactagtactacgtaatactcatgccactattgctaatctaactgtaatcatgtgatcatgtcagtatttgtagtactttcttcgtcctattttaagtgcaaccataagttttcgcgtctaactttgtagtaatttttttattagatgataaaacatgaacagtattttactcgtgacttatgtttttaaattttttaaattttcttttcaaataagatgacgatcaaaattgaacgcggaaaatcatgtttgcacttaaaaatgggacggatgaagtattacatattcttgatgttcaaaacgtgaaagtgaatatatttgaatattactttactcgtgacttatgtttttaatttttttaaaataaattttaaataagacggacgattaaagttgaacgcagaaaatcatagctgcacttaaaatggaacggagagatgtttagttaacattgaagtttggttgaaattggtacgatgtgatagaaaaattgtgtgtgtatgaaaggtttgatgtgatgaaaagttggacgtttggaaaaaaaaaactttgaaactgaacagggccatatcttgatgttcaaaacgcgaaagtgaatatattgtgtcagaccaaattacttttggatatttttgcctatcgttttctggatatggtttggtgaattgaaaacgcggtgacaccgcgcaggcacgcaggaggaagcggcggaggcgtacgacatagcggcgatcaagttccgcggcctgaacgccgtgaccaacttcgacatcagcaagtacgacgtgaagcgcatctgctccagcacccacctcatcggcggcgacctcgcgtgccgccgctccccgacgcgcatgctaccaccggacgctccggccggcgccgccggcgtcgacgtcgtcgtggcgccgggcgaccaccagcagatcagcgccggtggcggcggcgcgtccgacaactcggacaccgcctccgacggccaccgcggcgcgcacctgctgcacggcctgcagtacgcgcacgccatgaagttcgaggccggcgagagcagcggcggcggcggcggagacggcgccaccaccaactggatggccgccgccgccgccgcggcgcgcccggtcgccggcatcccgaccaccgtgcaccaccagctcccggtgttcgcgctgtggaacgactgatttttaattccattcccgcgatctctgctagtacaatattttttttctactgtgccgcacgcgcgtcgtcgtcgcacgtagtagtacgtggttagcgccatactgccatgcgtggtactagtgcttttgtgcactagcggcgggagactgctacgcatgtgacgaccggacccgggggcgcgtgcggtgcgcgcatatatattgatgtgagcccaaagctgtgcagggcgtgatgcatgcgtgtctcacggttggcatcttctccccccgaaggtggcgacaattttgccgcattttgtaacggttttaacatgcatgctctatatatgcgctagctccaccggaagcatacgatttctccggatttttactgt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0176300, RefSeq:Os03g0176300