Os03g0176600

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Revision as of 12:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0176600| Description = Conserved hypothetical protein| Version = NM_001186354.1 GI:297721838 GeneID:9266492| Length = 2616 bp| Definition ...")
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Gene Name

Os03g0176600

Description

Conserved hypothetical protein

Version

NM_001186354.1 GI:297721838 GeneID:9266492

Length

2616 bp

Definition

Oryza sativa Japonica Group Os03g0176600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4048105..4050720

Sequence Coding Region

4048196..4048337,4048430..4048540,4048661..4048728,4049519..4049613,4050155..4050225
,4050352..4050388,4050525..4050696

Expression

GEO Profiles:Os03g0176600

Genome Context

<gbrowseImage1> name=NC_008396:4048105..4050720 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:4048105..4050720 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccacctcgctcctccccaccacctccggcggcgggcacctctgcccctcaccgcctccgtctcgccgccgacgattctgccaggtcgccgccgcggcgggtggaatcggccgccgcgccgtctccctcgccggcgtcgcctcctggctcaccgccactgctgccggccgggcagacgcgagcccgtttgacaaatacgtcaagaagaagaagctggagccattggagacctacgttccggcagtactgttgactcaggaccaattcagggatctagagaagtcattagaatttgagaagccaagatatgatgagagcagatcattacttcgttctggtccagcatcttctctgcgtatcaatattcgagcagtggcgcagtatgcttctagcagtggtcaaggcaaagctgcctctgatgcagtggacgaatgcttacgagcattggaagatcttgactcactgctactacaagcatcacggaacaacccatcagcgtctgtcgatgtcatgaggagcaaaatcagtgtagcccttggagctttagacaacctccttcagactgtgccatcagcagtgctggacaaagggaaggccattgccgatgcataccggactcctacggatgattatgaaatgggcgatgcaacagagttggatccaagattgaaacaactacaggatattctttga</cdnaseq>

Protein Sequence

<aaseq>MPTSLLPTTSGGGHLCPSPPPSRRRRFCQVAAAAGGIGRRAVSL AGVASWLTATAAGRADASPFDKYVKKKKLEPLETYVPAVLLTQDQFRDLEKSLEFEKP RYDESRSLLRSGPASSLRINIRAVAQYASSSGQGKAASDAVDECLRALEDLDSLLLQA SRNNPSASVDVMRSKISVALGALDNLLQTVPSAVLDKGKAIADAYRTPTDDYEMGDAT ELDPRLKQLQDIL</aaseq>

Gene Sequence

<dnaseqindica>2384..2525#2181..2291#1993..2060#1108..1202#496..566#333..369#25..196#gtcgcgtcgcagcaggcagccagaatgcccacctcgctcctccccaccacctccggcggcgggcacctctgcccctcaccgcctccgtctcgccgccgacgattctgccaggtcgccgccgcggcgggtggaatcggccgccgcgccgtctccctcgccggcgtcgcctcctggctcaccgccactgctgccggccgtaagtccagctgcatgcagcatgctgttcgtctctctctctcgcgcgcgcgtgttcgtgtcgggatcggagctcagtgtttcgggtgtgcgagtaaatttgtttctgatctgcttcccaacttttgatgttgcaggggcagacgcgagcccgtttgacaaatacgtcaagaagtacttatccgtaccttgctctcccttcataaatttagtactcctactagtacattgcatttccgcaggttgcagcttttgatttccactgaaagccttgttgcttcttaaatttgtaatgcttaggaagaagctggagccattggagacctacgttccggcagtactgttgactcaggaccaattcagggatctaggtaagattaatccataagcttgccacctaaaacatatactgctgtattcttgttttttttttccttttctattgccctttggaaaccttgattgttagtgtacaaatataagcctgaatcaggtcgttgtttacaggaaccttagacatttcattgttcacaggaccttaaacataaagagacgcccggcgaaaaataaacataacgagacataatgtgtcttcttttcggccatatttcagattgtgaagtgtactgtccttagtatatttctgcagtcttcccctccgatttcattgccttcttatcatggagcaaatgatgtgttgaaataagcaaagccgttctactttaatgctagagaagtgctatcatgcatcttgaattttatagaggcaccagtatatcttgactaaatatgtttaatccaaccttggtcagatttccgattaaatgttttagagctatgatgcaatgctatatgtgatgtgtgatacaacctgtacctaggagattcatgtatatgtatgttcaattgcagagaagtcattagaatttgagaagccaagatatgatgagagcagatcattacttcgttctggtccagcatcttctctgcgtatcaatattcgagcagtaagatactgatcgtatggtgaatgtgattctggttctcaagttaacgagataccaaggcaataaatatgggcgtttggctccattatattggtggtgtggcccactttgatactctcaattgaaactagctagtggagtcgcgcattcgcgcaaccatgacctgtatgtcaaaaccagtagtatatgagcccatttacagtatgcactaatcgcacaactaaaataaatttatgccaagttttagctggtccatatgtaacaaagaacacattataaatgagagtcctgaataaaactgtagcctaaacaatagaggttcatttgtgcatgaaattaaattccagtccaaacgataatgttggtatgggggtaaactgtaggcacatttctgctacctgtgctttatctcctgactaatgtttgatcatacggttcacatttgttctccttattttgcccttctctagtttgtcttgttgcatacgtggtccaatgaggtgctttgaaaacattttgttttcactactttagatatggcattaatattcctatagactgtctgttttaaacattcaggagttgagattaatcagcaagtttcaactgcccttttttttccttaaacatcaagatattttacttgttcagattatgcccattgccataactggttcaaacatccagagaatgtgtattcgatctaatgatgtcagattatgtgtgcttaaaacaaactaagcccactagatatgcattgaattcacctgaagaagaaaacaaaatgcaggtggcgcagtatgcttctagcagtggtcaaggcaaagctgcctctgatgcagtggacgaatgcttacggtaaacaaaaatggttgatttatttcaaaatatacttgcttgctgaatgaaaatgatatgtagtaccatcgtagtatcttgtaagtactgataagtgatagcaaattcattttatcctagagcattggaagatcttgactcactgctactacaagcatcacggaacaacccatcagcgtctgtcgatgtcatgaggagcaaaatcagtgtagcccttggagctttagacaagtaaaatcagtgtccatatcaattgacatcctttctctgtcttcaattcgaacataatcatagctgaaatctgcgttattttgtcttttcagcctccttcagactgtgccatcagcagtgctggacaaagggaaggccattgccgatgcataccggactcctacggatgattatgaaatgggcgatgcaacagagttggatccaagattgaaacaactacaggatattctttgatgctgaatttgttaacacatactgaaagttttgtcaatgtgactgtactatatgtgaattgtgaagtgaagtatagtttgtacttcttgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0176600, RefSeq:Os03g0176600