Os04g0448500
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Contents
Annotated Information
Basic information
Gene name:aspartic protease/ Gene symbol：OsAP37
Function
Programmed cell death is essential for the development of multicellular organisms, yet pathways of plant programmed cell death and its regulation remain elusive. And the OsAP37 and OsAP25, which encode aspartic proteases that induce programmed cell death in both yeast and plants, is regulted directly by ETERNAL TAPETUM1. That is to say ETERNAL TAPETUM 1 promotes aspartic proteases triggering plant programmed cell death, and reveals a dynamic regulatory cascade in male reproductive development in rice.
Expression
Performed microarray analysis of eat1 at stage 9 of anther development , and observed changes in th expression of many genes. SoAP37showed a significant reduction in expression, which was further confirmed by qRT-PCR.
Evolution
Please input evolution information here.
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Labs working on this gene
1. Shanghai Jiao Tong Univ, Sch Life Sci & Biotechnol, State Key Lab Hybrid Rice, Shanghai 200030, Peoples R China
2. Univ Nottingham, Sch Biosci, Div Plant Sci, Loughborough, Leics, England
3. Michigan State Univ, Dept Energy, Plant Res Lab, E Lansing, MI 48824 USA
References
Ningning Niu;Wanqi Liang;Xijia Yang;Weilin Jin;Zoe A. Wilson;Jianping Hu;Dabing Zhang，EAT1 promotes tapetal cell death by regulating aspartic proteases during male reproductive development in rice， Nature Communications, 2013, 4: 1445
Structured Information
| Gene Name |
Os04g0448500 |
|---|---|
| Description |
Peptidase A1, pepsin family protein |
| Version |
NM_001059458.2 GI:297602821 GeneID:4335981 |
| Length |
1658 bp |
| Definition |
Oryza sativa Japonica Group Os04g0448500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:22752236..22753893 |
| Sequence Coding Region |
22752342..22753736 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:22752236..22753893 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:22752236..22753893 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgaacgccgccgtgttgctgctgctcctcgcgctcgccgccctcccggcgtcgtgcgcgccgccgagatccttccgcctcgagctcgccagcgtcgacgcctcggcagccgacgccgccaacctcacggagcatgagctcctgcggcgcgccatccagcgcagccggtaccggttggccggcatcggcatggcgcgcggcgaggcggccagcgcgcgcaaggccgtcgtggccgagacgcccatcatgccggccggcggcgagtacctggtgaagctcggcatcggcacgccgccgtacaagttcacggcggccatagacaccgccagcgacctcatctggacgcagtgccagccctgcaccggctgctaccaccaggtcgaccccatgttcaaccccagggtgtcctccacctacgccgcgctgccgtgcagcagcgacacgtgcgacgagctggacgtgcaccggtgcggccacgacgacgacgagtcgtgccagtacacctacacgtacagcggcaacgccacgacggagggcaccctggccgtcgacaagctggtcatcggcgaggacgcgttccgcggcgtcgccttcggctgcagcacctccagcaccggcggcgccccgccaccgcaggcgtccggtgtggtcggcctcggccgcggcccactctcgctggtgtcccagctctctgtgcggaggttcgcctactgcctgcccccgccggcgtcgaggatccccgggaagctcgtcctcggcgccgacgccgacgccgcccgcaacgccaccaaccggatcgccgtcccgatgagacgggacccgcggtacccgtcctactactacctcaacctcgacggcctgctcatcggcgacagggcgatgtccctgccgccaacgacgacgacgacggcgacggcgacggcgacggcgccggcgccggcgccgacgccctccccgaacgcgacggcggtcgccgtgggcgacgcgaacaggtacggaatgatcatcgacatcgcgtcgacgatcacgttcctggaggcatcgctgtacgacgagctggtgaacgacctggaggtggagatccggctgccgcgcgggacggggtcaagcctgggcctcgacctgtgcttcatcctgcccgacggcgtggcgttcgaccgggtgtacgtgccggcggtggcgctggcgttcgacgggaggtggctccggctggacaaggcgcggctgttcgcggaggacagggagagcgggatgatgtgcctgatggtggggagggcggaggcgggcagcgtctccatcctcggcaacttccagcagcagaacatgcaggtgctctacaaccttcgccgcggcagggtcaccttcgtccagtccccctgcggcgccctgcgatga</cdnaseq> |
| Protein Sequence |
<aaseq>MNAAVLLLLLALAALPASCAPPRSFRLELASVDASAADAANLTE HELLRRAIQRSRYRLAGIGMARGEAASARKAVVAETPIMPAGGEYLVKLGIGTPPYKF TAAIDTASDLIWTQCQPCTGCYHQVDPMFNPRVSSTYAALPCSSDTCDELDVHRCGHD DDESCQYTYTYSGNATTEGTLAVDKLVIGEDAFRGVAFGCSTSSTGGAPPPQASGVVG LGRGPLSLVSQLSVRRFAYCLPPPASRIPGKLVLGADADAARNATNRIAVPMRRDPRY PSYYYLNLDGLLIGDRAMSLPPTTTTTATATATAPAPAPTPSPNATAVAVGDANRYGM IIDIASTITFLEASLYDELVNDLEVEIRLPRGTGSSLGLDLCFILPDGVAFDRVYVPA VALAFDGRWLRLDKARLFAEDRESGMMCLMVGRAEAGSVSILGNFQQQNMQVLYNLRR GRVTFVQSPCGALR</aaseq> |
| Gene Sequence |
<dnaseqindica>107..1501#atttcatacgtccgtccaagcgacacccgcccacatgcgtaacgccggcagttgaaccagttcgcggtcacccccactggccagtgggcactgccacgccgcgacgatgaacgccgccgtgttgctgctgctcctcgcgctcgccgccctcccggcgtcgtgcgcgccgccgagatccttccgcctcgagctcgccagcgtcgacgcctcggcagccgacgccgccaacctcacggagcatgagctcctgcggcgcgccatccagcgcagccggtaccggttggccggcatcggcatggcgcgcggcgaggcggccagcgcgcgcaaggccgtcgtggccgagacgcccatcatgccggccggcggcgagtacctggtgaagctcggcatcggcacgccgccgtacaagttcacggcggccatagacaccgccagcgacctcatctggacgcagtgccagccctgcaccggctgctaccaccaggtcgaccccatgttcaaccccagggtgtcctccacctacgccgcgctgccgtgcagcagcgacacgtgcgacgagctggacgtgcaccggtgcggccacgacgacgacgagtcgtgccagtacacctacacgtacagcggcaacgccacgacggagggcaccctggccgtcgacaagctggtcatcggcgaggacgcgttccgcggcgtcgccttcggctgcagcacctccagcaccggcggcgccccgccaccgcaggcgtccggtgtggtcggcctcggccgcggcccactctcgctggtgtcccagctctctgtgcggaggttcgcctactgcctgcccccgccggcgtcgaggatccccgggaagctcgtcctcggcgccgacgccgacgccgcccgcaacgccaccaaccggatcgccgtcccgatgagacgggacccgcggtacccgtcctactactacctcaacctcgacggcctgctcatcggcgacagggcgatgtccctgccgccaacgacgacgacgacggcgacggcgacggcgacggcgccggcgccggcgccgacgccctccccgaacgcgacggcggtcgccgtgggcgacgcgaacaggtacggaatgatcatcgacatcgcgtcgacgatcacgttcctggaggcatcgctgtacgacgagctggtgaacgacctggaggtggagatccggctgccgcgcgggacggggtcaagcctgggcctcgacctgtgcttcatcctgcccgacggcgtggcgttcgaccgggtgtacgtgccggcggtggcgctggcgttcgacgggaggtggctccggctggacaaggcgcggctgttcgcggaggacagggagagcgggatgatgtgcctgatggtggggagggcggaggcgggcagcgtctccatcctcggcaacttccagcagcagaacatgcaggtgctctacaaccttcgccgcggcagggtcaccttcgtccagtccccctgcggcgccctgcgatgagatctctcgtcaccagtatctttgtaaaaccctgcatacatcaattcatcatcatcgtggctggcttatggcctgatgtagttagtgctcatcaacaaattatttggatactcagagatgctttgattagcttgaatcataaaacattttatacgac</dnaseqindica> |
| External Link(s) |
