Os10g0162400

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Revision as of 08:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0162400| Description = Protein of unknown function DUF869, plant family protein| Version = NM_001070748.1 GI:115481239 GeneID:4348163| Leng...")
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Gene Name

Os10g0162400

Description

Protein of unknown function DUF869, plant family protein

Version

NM_001070748.1 GI:115481239 GeneID:4348163

Length

4183 bp

Definition

Oryza sativa Japonica Group Os10g0162400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:3958237..3962419

Sequence Coding Region

3958239..3960445,3960588..3960648,3961500..3961946

Expression

GEO Profiles:Os10g0162400

Genome Context

<gbrowseImage1> name=NC_008403:3958237..3962419 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:3958237..3962419 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gtgaaggaggaaagcgagcaaaagctgcaagatgttgtctttgcaaaaaccaagcagtgggagatgatgaaggccgaactagaagcaaaattagcttcttttgaacatgagcttattagagcaggtgctgagaatgacgcactctcaagatctcttgaagagcgggaacacttaatgatgaaggttggtggggaaaaagagcaagcagaatctcagatcgaagtgttgaaaggcactattcaatctggtgaaaaagagataagttcattgaagtatgaactacatgttctttccaaagaatttgaaattcgcaatgaagaaaagaacatgagtgtgcgttcagctgatgtagcaaccaagcaacatgtagaggatgtcaagaaaatatcaaaactggaagcggagtgccaaaggttacgtggtcttgttcggaaaaagttacccgggccagctgcattagctcaaatgaagctggaagtggatagctggggcagagaccatgctgataacagattgcgacgctccccttcaaggagttctaatttccatcatcctttgtcaccatcccctgataattctcttgaaaacttgcagcacatgcagaaagagaatgaatttctgactgcacgcttgttatcgatggaggatgaaacaaagatgttaaaagaggcgctgtcaaagcgtaataatgagttgcaggtgtcaagaaacacatgtgctaagacagcaggcaagctccgcagcatggatgttcatatggtgagtgctaggcagtataagaatccaacaaattcaaaccttgatgttcaccatgatggtgcactgagcctgaatggaagtaacccaccaagtctgacttccatgtccgaagacggagttgatgatgcaacaagttgtgccgaatcttgggccaatgctttgatatctgagctctcacacatcaagaaagataatggaggtaagggcagtttgacagaaaattccaatcagatggtactcatggatgactttctagagatggagaggttggcgtgtttatctcctgaaggaaaagaatgtggaagctttattgacaagaagaaggccactaaagttcacacaactctcactaccatcactaaacgggaaagtgatagagattcatggccatcctcgcagttcccagatacaccatccagcagtgagcatctgcctgagaactccccactttcaaaattgcactcaagaatttcttctctcttaggttctcattcaccacagaacaatgttggcaaggtcctagagggtatcagaaatatcctaagagatatcaaggaagaagcagaatcagtgagtgcaaaaaagaatcagcctgataacatgaatggacttgctgataatggatctttgacaaagcaatccaagaacctgagggatgtggatcatggtctaagacatgctattttggaaattcttgattttttccagccatttaaaagacaactatctgaggtccaaggtaaaagttcccaccaaaacacaatccttgagaaaatagaaaagttctccactatagctgacaaagttgtgctaaacgaaaatgctcttgccgaaatggtgattgcattagcggaaattttggcaggaaattctgctattaaactcacattgccgagagacagcatcactgaaaccgagagcaataatctggactatgttgataaagtgaccttattggaaaacaaagtgcatcatgagccaattaaagatagccttgctgatatttgttcacttgcgcctcattcgtcttctgatcctgactttgagggttctagggatgcatttgttgtcaaaaccacagtgcagatgtgctcaatggaggaatatgaacaactgaaatcggagaagaggaaattggagatggaattagcaaagtgcaatgaaactatcgaatgtagaaagcttgagtttagtctgatggagaaaaacatggaagagcttacgtcaaagttatctgcatgcgagaaatcgaatagcttgactgagacacagctgaagtgtatggctgaatcatacaaatcacttgagttacacaagttgaaattagaaagtgaaatagaagttatgcatagacaaataaatactttgagaactgaacttgctgatgaaagacaaaaccatcaggacgatttggcgaagtacagagatcttaaggagaagattgaaaggtatgagaatgagaagaatacttcatctgtagatgaggatgcaggtgttaaaataaagcaggacaaagagatcgcagcagcagcagagaagcttgcagaatgccaggagacaatattgcttcttggccgtcagctgcagactcttcgcccccctccagcagaaccactgggttctgtgttaaaccaacaacctgtgggggtgttttctgaagatcaagctagaacaacccaaggcttgcattttaagaagctgtcaggtcaatttgatacagatcacacattctcaagtgcaccgggaacaggaaacgtatctccgctaaatggatatagaacacacaaaagcccctccaatcttgatggaaacacttacttcgcttctccaaacaactccaagcgtccaaagcacagatcaaggtcttcttcctcttcctcatttactaaccagttcacagagaaacagagccgaggtttcagtcggttattttcgaagagcaagagcgaatactaa</cdnaseq>

Protein Sequence

<aaseq>VKEESEQKLQDVVFAKTKQWEMMKAELEAKLASFEHELIRAGAE NDALSRSLEEREHLMMKVGGEKEQAESQIEVLKGTIQSGEKEISSLKYELHVLSKEFE IRNEEKNMSVRSADVATKQHVEDVKKISKLEAECQRLRGLVRKKLPGPAALAQMKLEV DSWGRDHADNRLRRSPSRSSNFHHPLSPSPDNSLENLQHMQKENEFLTARLLSMEDET KMLKEALSKRNNELQVSRNTCAKTAGKLRSMDVHMVSARQYKNPTNSNLDVHHDGALS LNGSNPPSLTSMSEDGVDDATSCAESWANALISELSHIKKDNGGKGSLTENSNQMVLM DDFLEMERLACLSPEGKECGSFIDKKKATKVHTTLTTITKRESDRDSWPSSQFPDTPS SSEHLPENSPLSKLHSRISSLLGSHSPQNNVGKVLEGIRNILRDIKEEAESVSAKKNQ PDNMNGLADNGSLTKQSKNLRDVDHGLRHAILEILDFFQPFKRQLSEVQGKSSHQNTI LEKIEKFSTIADKVVLNENALAEMVIALAEILAGNSAIKLTLPRDSITETESNNLDYV DKVTLLENKVHHEPIKDSLADICSLAPHSSSDPDFEGSRDAFVVKTTVQMCSMEEYEQ LKSEKRKLEMELAKCNETIECRKLEFSLMEKNMEELTSKLSACEKSNSLTETQLKCMA ESYKSLELHKLKLESEIEVMHRQINTLRTELADERQNHQDDLAKYRDLKEKIERYENE KNTSSVDEDAGVKIKQDKEIAAAAEKLAECQETILLLGRQLQTLRPPPAEPLGSVLNQ QPVGVFSEDQARTTQGLHFKKLSGQFDTDHTFSSAPGTGNVSPLNGYRTHKSPSNLDG NTYFASPNNSKRPKHRSRSSSSSSFTNQFTEKQSRGFSRLFSKSKSEY</aaseq>

Gene Sequence

<dnaseqindica>3..2209#2352..2412#3264..3710#cagtgaaggaggaaagcgagcaaaagctgcaagatgttgtctttgcaaaaaccaagcagtgggagatgatgaaggccgaactagaagcaaaattagcttcttttgaacatgagcttattagagcaggtgctgagaatgacgcactctcaagatctcttgaagagcgggaacacttaatgatgaaggttggtggggaaaaagagcaagcagaatctcagatcgaagtgttgaaaggcactattcaatctggtgaaaaagagataagttcattgaagtatgaactacatgttctttccaaagaatttgaaattcgcaatgaagaaaagaacatgagtgtgcgttcagctgatgtagcaaccaagcaacatgtagaggatgtcaagaaaatatcaaaactggaagcggagtgccaaaggttacgtggtcttgttcggaaaaagttacccgggccagctgcattagctcaaatgaagctggaagtggatagctggggcagagaccatgctgataacagattgcgacgctccccttcaaggagttctaatttccatcatcctttgtcaccatcccctgataattctcttgaaaacttgcagcacatgcagaaagagaatgaatttctgactgcacgcttgttatcgatggaggatgaaacaaagatgttaaaagaggcgctgtcaaagcgtaataatgagttgcaggtgtcaagaaacacatgtgctaagacagcaggcaagctccgcagcatggatgttcatatggtgagtgctaggcagtataagaatccaacaaattcaaaccttgatgttcaccatgatggtgcactgagcctgaatggaagtaacccaccaagtctgacttccatgtccgaagacggagttgatgatgcaacaagttgtgccgaatcttgggccaatgctttgatatctgagctctcacacatcaagaaagataatggaggtaagggcagtttgacagaaaattccaatcagatggtactcatggatgactttctagagatggagaggttggcgtgtttatctcctgaaggaaaagaatgtggaagctttattgacaagaagaaggccactaaagttcacacaactctcactaccatcactaaacgggaaagtgatagagattcatggccatcctcgcagttcccagatacaccatccagcagtgagcatctgcctgagaactccccactttcaaaattgcactcaagaatttcttctctcttaggttctcattcaccacagaacaatgttggcaaggtcctagagggtatcagaaatatcctaagagatatcaaggaagaagcagaatcagtgagtgcaaaaaagaatcagcctgataacatgaatggacttgctgataatggatctttgacaaagcaatccaagaacctgagggatgtggatcatggtctaagacatgctattttggaaattcttgattttttccagccatttaaaagacaactatctgaggtccaaggtaaaagttcccaccaaaacacaatccttgagaaaatagaaaagttctccactatagctgacaaagttgtgctaaacgaaaatgctcttgccgaaatggtgattgcattagcggaaattttggcaggaaattctgctattaaactcacattgccgagagacagcatcactgaaaccgagagcaataatctggactatgttgataaagtgaccttattggaaaacaaagtgcatcatgagccaattaaagatagccttgctgatatttgttcacttgcgcctcattcgtcttctgatcctgactttgagggttctagggatgcatttgttgtcaaaaccacagtgcagatgtgctcaatggaggaatatgaacaactgaaatcggagaagaggaaattggagatggaattagcaaagtgcaatgaaactatcgaatgtagaaagcttgagtttagtctgatggagaaaaacatggaagagcttacgtcaaagttatctgcatgcgagaaatcgaatagcttgactgagacacagctgaagtgtatggctgaatcatacaaatcacttgagttacacaagttgaaattagaaagtgaaatagaagttatgcatagacaaataaatactttgagaactgaacttgctgatgaaagacaaaaccatcaggacgatttggcgaagtacagagatcttaaggagaagattgaaaggtgaaatacctgtctttccattttggtatttccttagtttttctttgttgaaaggacttagatagactattttatcatcttgtttcctttagtttgttgcatgtttaacagattcttcgttgactttgtttatgtcatgaaggtatgagaatgagaagaatacttcatctgtagatgaggatgcaggtgttaaaataaagcaggtaaaaattactaagcctaaacttcatgttcgtaactgattataaacctatgtagtttgtttactccagcttctttcattaaatatagaataagctggtcgagcattgataccacgagaaattcacctatgtagcgagctggctgcttgcagttagggggaccttgtactgctgaaacttccttctcaatacaaagatacgcgagtcttttgcgtattccccaaaaattaaatatggaataaatttcataaatgtacaggcataactattaacgctcatttctctgaactttaatattccttgttaaagttgcaattggttctaatagacctggccactgacagcctcaaatcatgcgtcccagtgcatccaacagcctatagaaaagtgtccatgtgtgtctatggtgttgagtgatgagaggcaacattagaccctttttagctgatctatgtgcccaatacttatgacatgcgtgtgtctgtgtcagcagcctgctatgcacaagccaacatttcaacaaattggtgaaaacttagaaggtgccaaatagtgccaagaccaattgcttgttgcatgggctctaaatctatagttatgcacaaaacattgcacccaaatctatagtttcgtagaattggttcttagaaatctgtgataatctcttatactatatcagctcatatagtgccaaacacatgaattacacatttattcccttgtgctctccgaataaatacttcctggacaataaacgcttcagtgtccttcaaattctttcttttaaacattattttttttctggtcatgttgtgtattccataatatattcttggttaaaataatggcaggacaaagagatcgcagcagcagcagagaagcttgcagaatgccaggagacaatattgcttcttggccgtcagctgcagactcttcgcccccctccagcagaaccactgggttctgtgttaaaccaacaacctgtgggggtgttttctgaagatcaagctagaacaacccaaggcttgcattttaagaagctgtcaggtcaatttgatacagatcacacattctcaagtgcaccgggaacaggaaacgtatctccgctaaatggatatagaacacacaaaagcccctccaatcttgatggaaacacttacttcgcttctccaaacaactccaagcgtccaaagcacagatcaaggtcttcttcctcttcctcatttactaaccagttcacagagaaacagagccgaggtttcagtcggttattttcgaagagcaagagcgaatactaaccgacttttgagcttgttttgcttgtcgtggcaagcactgcaggtgtatatttttgccaacaaaacctaccacctatttgtgtattatgtagatgatgcctgcacttaccagattctagtagtttttgcttgagattttagctgtatccatattcagtgtggttgtcagccgtcagtactaagaaccatcctttgccctggatttttttgggttgctgttactgcttatacctcatggaacctcactgtaaatttgcctagctacctcgatgaagattgagaaggtaatgttgttagcgtgaagagatttctcttgccaaggttcagttaaccgctagcttgtgttgtggttggttagttctctgtacagataacctgaaaaaagtttggagtttgctgtcaagtttttgattgtaaagtatttggatactctgtgtgctaacagtttggaatgtaatgtgttgccccagttc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0162400, RefSeq:Os10g0162400