Os03g0178400

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Revision as of 12:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0178400| Description = Epoxide hydrolase family protein| Version = NM_001055687.1 GI:115451102 GeneID:4331817| Length = 3033 bp| Definitio...")
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Gene Name

Os03g0178400

Description

Epoxide hydrolase family protein

Version

NM_001055687.1 GI:115451102 GeneID:4331817

Length

3033 bp

Definition

Oryza sativa Japonica Group Os03g0178400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4111794..4114826

Sequence Coding Region

4111941..4112091,4112185..4112252,4112343..4112435,4114113..4114787

Expression

GEO Profiles:Os03g0178400

Genome Context

<gbrowseImage1> name=NC_008396:4111794..4114826 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:4111794..4114826 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgccagcctgagcctcgtgccgctcctcgactacttcgcgcgccgggagttcgccgccgccggcctcagccccggcgccgtcacgctgccgtacccgggcgacggcggcgaggcgacctgcaccgtccactactgggcctccacgggggagccgctgctgccgccgctgctgctcgtgcatgggttcggcccacgggccacctggcagtggcgctgccaggtgggcccactgtcccggcatttccacctcatcgtgcccgacctcatcggcttcggcggcagctcgttcggcggcgactccgccgcctcgccgccgtcggaggctacgcaggcggcggcgctggcggcgctgctggacgcgctgccggggatgaaggggaggcgggtggcggtggcggggaccagctacggcgggttcgtggcgtactggctggcgcgcacggcgggggccgggagggttggccccgtggtgatcgcgagctccgacctgctcaagacggcggcggacgaccgggggttcctgaagagggccggcgacgggtggagcggcgtggaggaggtgctcctgccggccgagcccgccgcgatgcggaagctgctggagatggcctcgtgccggccgccgccgccggtgctgatgccggacttcatcctccgcgacttcatccagaaacttttcacggagaacagagagcaacttattcaactcttcaaggggatcacagttggcacagacaagttcccagtaactccaatatctcaggaagtgttgattgtctggggagagcaagatcagttgttcccggttgagaaggcttatgcagttcagagttctttggatgggaaagctagagtggaaatcataagcaaaacaggccatgctccacagctggaggatccaacccggttcaacaagatcctgctagacttcttgctggctactcacaagcctgatccttcgtcaaatggcgcatcgcaataa</cdnaseq>

Protein Sequence

<aaseq>MGASLSLVPLLDYFARREFAAAGLSPGAVTLPYPGDGGEATCTV HYWASTGEPLLPPLLLVHGFGPRATWQWRCQVGPLSRHFHLIVPDLIGFGGSSFGGDS AASPPSEATQAAALAALLDALPGMKGRRVAVAGTSYGGFVAYWLARTAGAGRVGPVVI ASSDLLKTAADDRGFLKRAGDGWSGVEEVLLPAEPAAMRKLLEMASCRPPPPVLMPDF ILRDFIQKLFTENREQLIQLFKGITVGTDKFPVTPISQEVLIVWGEQDQLFPVEKAYA VQSSLDGKARVEIISKTGHAPQLEDPTRFNKILLDFLLATHKPDPSSNGASQ</aaseq>

Gene Sequence

<dnaseqindica>2736..2886#2575..2642#2392..2484#40..714#actgcgagagctcagtggagggagaagaccatcaccaccatgggcgccagcctgagcctcgtgccgctcctcgactacttcgcgcgccgggagttcgccgccgccggcctcagccccggcgccgtcacgctgccgtacccgggcgacggcggcgaggcgacctgcaccgtccactactgggcctccacgggggagccgctgctgccgccgctgctgctcgtgcatgggttcggcccacgggccacctggcagtggcgctgccaggtgggcccactgtcccggcatttccacctcatcgtgcccgacctcatcggcttcggcggcagctcgttcggcggcgactccgccgcctcgccgccgtcggaggctacgcaggcggcggcgctggcggcgctgctggacgcgctgccggggatgaaggggaggcgggtggcggtggcggggaccagctacggcgggttcgtggcgtactggctggcgcgcacggcgggggccgggagggttggccccgtggtgatcgcgagctccgacctgctcaagacggcggcggacgaccgggggttcctgaagagggccggcgacgggtggagcggcgtggaggaggtgctcctgccggccgagcccgccgcgatgcggaagctgctggagatggcctcgtgccggccgccgccgccggtgctgatgccggacttcatcctccgcgacttcatccaggtcaaaactgaaaccactcccactacttctcgcgctgacaattcaaaaactaggccgtctcgaatcgctcgtacgtagcataaagttggatttcttttaaaaaaaaagtataagaagggcatcatgttcctgttcgatccgtggaactgctgctcgcatttttatatacgctctgaactgtgaagactgacagtggagagcaaacatgttttttttttaatttaattaaacgccggatgaacaagaacgcataacattacacgcacaaaatcacactcgtccaacacatattcaaagagacataaaccaacaatatatctataatcttactaaaatcatgttgaaaacaaccatgtaaattactcctaccatttagagcaggtacaatagcaggctataagccagctataataatattttaaagagataaagtaagagagagaagaacagtgggctacaaatctgtagccagctgcagcacggactccaagacgtaatgtgtgtatgacaggtgggaccaggtattaatagtatagtaagcaactattgtatgaattggctattacattagttataaatgatatggagctagtagtgggctatactattaaacttgctcttagagcaggtacaatagcaggctataagccagctataaccatatatcgagaagaaaagtgaagagagagaagaaagcgggctacagatttgtagccggctgcaacacagactccaaaatgttatgtgtgtatgagagatgggaccagatattaatggtgtagtatatttttatatttaactattgtatgaatgatctattagattggctatagatgttttggagctaatagttggctatactattgaccttgctcttagtagtactccctccgtcccaaaatataataacttttacaccaacattctcttcttaaccaatcacaaccctccaccatttacttttcccacctacctccactactcatccaatcacaaccctccaccacttacttctatctactttcttaatataaccacgctcaactctaaaacttattatattatgagatggagggagtaccaaataagcatagtagaagattatatatcctgtcatttccatctgacggttgaaatgcatgaatcaaaatatgcaactgttgatcgaaatacgcagttgctttttttttctgttctcagtagtaagccaaaaatgtaatttccagttgttttctctctttttcggttaatttctgtcctcgggaatgtaacaaggtgccgcatgaattggcagccatgggatgcaatctccaaaacatttccagctgggccgatattccgcctgggcctggaacgtctggtgaccagcgatttggctggatcgtcacagtaatatattcggttctcgtaaaaaaaatgttggttttgaacttgcactggcatctaaacaaatgacgacaactcacagctaagtaatgaatctagcatccatttgcaagaggcaaagccatgcacactgcaataatacccaactacttttagcgggtgctacagtttacacagctcatgtttgttgagattggtagtatatcattcagaacttcagattactcacagaagtagccaaacgccactgtcctctgaaatagatggttttgttatcttctactatatcagaaacttttcacggagaacagagagcaacttattcaactcttcaaggggatcacagttggcacagacaagttcccagtaactccaatatctcaggtaagtgacagacttattacagtatttcaaccagtgaattcactgacacttaccgtagctgaaacctttcatgtttcattggcattgtaggaagtgttgattgtctggggagagcaagatcagttgttcccggttgagaaggcttatgcagttcagaggtaatggatagtaacatactagtacgaagcttccatttcagtatttaactgaacacggattgacgtttcctgcacaaaattcgctctgtccagttctttggatgggaaagctagagtggaaatcataagcaaaacaggccatgctccacagctggaggatccaacccggttcaacaagatcctgctagacttcttgctggctactcacaagcctgatccttcgtcaaatggcgcatcgcaataagtcggatgcccactcgaatatttgattgattgaaataagatggttagccaccttcgtccattcatagctaaaatttgtactacgaattatttgagaacgcacattgagaaataattaaagaaaatgggtggattgttgatttgtttt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0178400, RefSeq:Os03g0178400