Os03g0180000

From RiceWiki
Revision as of 12:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0180000| Description = Antihaemostatic protein domain containing protein| Version = NM_001055694.2 GI:297600421 GeneID:4331825| Length = 21...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0180000

Description

Antihaemostatic protein domain containing protein

Version

NM_001055694.2 GI:297600421 GeneID:4331825

Length

2185 bp

Definition

Oryza sativa Japonica Group Os03g0180000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4172619..4174803

Sequence Coding Region

4172726..4174645

Expression

GEO Profiles:Os03g0180000

Genome Context

<gbrowseImage1> name=NC_008396:4172619..4174803 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:4172619..4174803 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatctcgtcggcgggaccgcatcctcgccggattcggcccctcgccgccgcctccctcgtgctgttcctcttcctgctctacagccgctccggcgggagcttggtgcggtctccacgggtattgagcttcgattcgcatacggggcaccgtagattcctctccgatgccgatcctatcagccccgcgtccaacctgtcggagatcggggagctaaacggcgagcagccgccggtggatccctccgtggcgtgcgccggggtagcgcggcacgaggggttcgggtcccagtgcgagttcctccgggcgcacccgcagtgtagctccggcgggttcgtcgactacttgggcttcttctactgccggtgcgagaggttcagggtgctcggctatgcggtgctcggtgtgtgcctagcggctctgttctacatgcttgggaacacggccgcggattacttctgctgcagccttgagaagatgtccgcgctgctacggctcccgccgaccgtggccggagtgacattgctcccctttggaaatggcgcgcctgatgtgtttgcgagtattgccgcgtttatggggaccggcgctggtgatgttgggctgaacagtgtgttgggcggagcggtctttgtgacttgtgttgttgtcggagctgtgtcattgtgcgtggcggagaagaatgtgcagattgatagaagatgctttgtgagggatgttgggttctttctgatgactctagtagcactgtcgattattttgattgttgggaaggtgaccgtttggggagcgattatgtttgtgtcgatttatgtggtttatgcgtttgtggtggctgcaaatgaggtattgaggaagcatgcacggaggcttaagtttgatgtggtcacaccactgctgcctgtgagagggagtatctttgcacaaggaacagaagatgatgagtccgtgtacagttcacttcttgaggaggaatcagatggtgacgtggctcaaataaacacatccttgcctcagtggatgtgggcttctcatgtggccatttactcaaatcatgggatcagaggtggttcacctgacagttccaggccgctatggggttggagtgatgaagaagtggataattccacagttagcttctccaagctgttcttgtttttggagctccccttgacgataccaagaaggttgacaattccaatagttgaggaagaccggtggtcgaaagaatatgctgttgctagtgctggcttggcgcctgttctgctggcatttctttggagcagtcaagatggggtatccactaaggctcacatagcagcatatgtgatagctggtatttctgggatggcacttgcttctctcgctttcatgttcactgaccatgaacgacctccacggagatttttattcccatgggtgttgggagggtttgtgatgagcattatctggttctacatcattgccaatgaactggttgcacttttagttgcttttggagtgatattggggatcaatccttcaattcttgggttaactgtgttagcatggggtaattcgatgggtgacttaatgtcaaatgttgccttggcaatgaatggaggagatggtgtgcagatcgccatgtctggatgctacgcaggacctatgttcaatacacttgctggattgggaatatcgatgctgcttggagcttggtcaacagcaccaaactcttatgttcttcctcaagacagctctctcatttacacaatgagcttcctcgttggtggattgatctgggctcttgttatgctgccacggggtggcatgcagcctaacaagatacttggagttggtctcattgccctttactcagtttttctttttattagggtaagcaatgcaatggggatattgccattgcctggcttgagttag</cdnaseq>

Protein Sequence

<aaseq>MISSAGPHPRRIRPLAAASLVLFLFLLYSRSGGSLVRSPRVLSF DSHTGHRRFLSDADPISPASNLSEIGELNGEQPPVDPSVACAGVARHEGFGSQCEFLR AHPQCSSGGFVDYLGFFYCRCERFRVLGYAVLGVCLAALFYMLGNTAADYFCCSLEKM SALLRLPPTVAGVTLLPFGNGAPDVFASIAAFMGTGAGDVGLNSVLGGAVFVTCVVVG AVSLCVAEKNVQIDRRCFVRDVGFFLMTLVALSIILIVGKVTVWGAIMFVSIYVVYAF VVAANEVLRKHARRLKFDVVTPLLPVRGSIFAQGTEDDESVYSSLLEEESDGDVAQIN TSLPQWMWASHVAIYSNHGIRGGSPDSSRPLWGWSDEEVDNSTVSFSKLFLFLELPLT IPRRLTIPIVEEDRWSKEYAVASAGLAPVLLAFLWSSQDGVSTKAHIAAYVIAGISGM ALASLAFMFTDHERPPRRFLFPWVLGGFVMSIIWFYIIANELVALLVAFGVILGINPS ILGLTVLAWGNSMGDLMSNVALAMNGGDGVQIAMSGCYAGPMFNTLAGLGISMLLGAW STAPNSYVLPQDSSLIYTMSFLVGGLIWALVMLPRGGMQPNKILGVGLIALYSVFLFI RVSNAMGILPLPGLS</aaseq>

Gene Sequence

<dnaseqindica>159..2078#aattcccaaaccgcaccttccaatcctccgagcaggcaaaccctaaccccgacgacccgcgccccacgaaacccctcccctccgcccgaatcactcgctgccacccccaaattcggcatgcccgtccccggaaaccctaggcactgacctcgccggagatgatctcgtcggcgggaccgcatcctcgccggattcggcccctcgccgccgcctccctcgtgctgttcctcttcctgctctacagccgctccggcgggagcttggtgcggtctccacgggtattgagcttcgattcgcatacggggcaccgtagattcctctccgatgccgatcctatcagccccgcgtccaacctgtcggagatcggggagctaaacggcgagcagccgccggtggatccctccgtggcgtgcgccggggtagcgcggcacgaggggttcgggtcccagtgcgagttcctccgggcgcacccgcagtgtagctccggcgggttcgtcgactacttgggcttcttctactgccggtgcgagaggttcagggtgctcggctatgcggtgctcggtgtgtgcctagcggctctgttctacatgcttgggaacacggccgcggattacttctgctgcagccttgagaagatgtccgcgctgctacggctcccgccgaccgtggccggagtgacattgctcccctttggaaatggcgcgcctgatgtgtttgcgagtattgccgcgtttatggggaccggcgctggtgatgttgggctgaacagtgtgttgggcggagcggtctttgtgacttgtgttgttgtcggagctgtgtcattgtgcgtggcggagaagaatgtgcagattgatagaagatgctttgtgagggatgttgggttctttctgatgactctagtagcactgtcgattattttgattgttgggaaggtgaccgtttggggagcgattatgtttgtgtcgatttatgtggtttatgcgtttgtggtggctgcaaatgaggtattgaggaagcatgcacggaggcttaagtttgatgtggtcacaccactgctgcctgtgagagggagtatctttgcacaaggaacagaagatgatgagtccgtgtacagttcacttcttgaggaggaatcagatggtgacgtggctcaaataaacacatccttgcctcagtggatgtgggcttctcatgtggccatttactcaaatcatgggatcagaggtggttcacctgacagttccaggccgctatggggttggagtgatgaagaagtggataattccacagttagcttctccaagctgttcttgtttttggagctccccttgacgataccaagaaggttgacaattccaatagttgaggaagaccggtggtcgaaagaatatgctgttgctagtgctggcttggcgcctgttctgctggcatttctttggagcagtcaagatggggtatccactaaggctcacatagcagcatatgtgatagctggtatttctgggatggcacttgcttctctcgctttcatgttcactgaccatgaacgacctccacggagatttttattcccatgggtgttgggagggtttgtgatgagcattatctggttctacatcattgccaatgaactggttgcacttttagttgcttttggagtgatattggggatcaatccttcaattcttgggttaactgtgttagcatggggtaattcgatgggtgacttaatgtcaaatgttgccttggcaatgaatggaggagatggtgtgcagatcgccatgtctggatgctacgcaggacctatgttcaatacacttgctggattgggaatatcgatgctgcttggagcttggtcaacagcaccaaactcttatgttcttcctcaagacagctctctcatttacacaatgagcttcctcgttggtggattgatctgggctcttgttatgctgccacggggtggcatgcagcctaacaagatacttggagttggtctcattgccctttactcagtttttctttttattagggtaagcaatgcaatggggatattgccattgcctggcttgagttagttgcataatcctgttgtaaaaaaagaagaagagatgttgatatgcataaaattgcctatccatgcctgtctttatacaaatgaaatggaatcacacgtgttcttatc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0180000, RefSeq:Os03g0180000