Os03g0183100

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Revision as of 12:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0183100| Description = SAP-like protein BP-73 (OsBP-73) (Riaa1)| Version = NM_001055713.1 GI:115451154 GeneID:4331846| Length = 6579 bp| D...")
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Gene Name

Os03g0183100

Description

SAP-like protein BP-73 (OsBP-73) (Riaa1)

Version

NM_001055713.1 GI:115451154 GeneID:4331846

Length

6579 bp

Definition

Oryza sativa Japonica Group Os03g0183100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4334965..4341543

Sequence Coding Region

4337864..4338969,4341438..4341459

Expression

GEO Profiles:Os03g0183100

Genome Context

<gbrowseImage1> name=NC_008396:4334965..4341543 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:4334965..4341543 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgcttccgccgcatccaggcagaacattaccagcctatcatggagacaacagatttcttcttggagcttgtttcctgagtaaactgcctatgctgcgcccaatgaagttgtctttggtatgcagtgctaatcccaacaaccataggtcaagaagttcggatatcacacgccatcagaagggtggatcagctcggaggaaaagtaagccttaccaggagaaagatgactctgagaatattgatgaattcgatactgatattatgtcctccaaaaatggaccacccatctctttgacaagcaattcccgtcctcaagcaacatcagtcccaggggaaagagagaaggagatagtagagttgtttaaaagggttcaagcacaattgcgagcaaggggaaaagggaaggaggagaagaagcctgaacaagcaaaagcacagggtgagaggggcagtgttgactcccttctaaatctgcttaggaagcactcagtggaccaacgaaggaagagcggtgatgagaaagaacagagtgttgaccaaacaaagagaagcaatgaatctggaaataaacaaaattcaagcatcttcataaagaatgacactcaggaagaacagaaaaagccacatcctgcagccttcaaaaggccagcttcaaattttaggcgaagatcccctgttcctaatgtaaagttccagcctgttaccaatgttgatgccgaacgagtcatcaataacatcaatgatgccgtacaagaggctaagccaactttggaaaataaggctgctacagatgaaccagactcggtttctacattcgaacctaattctgtaatagaaccagaaaacctatctttggatgaccttgatcatatttcagatgatgaacctgatgcttctgatactgatgaacccagtggagaatatgatgagccatctttgcaaatcccaagtgttccaattattgatgaatctcatgatacgactctgaaatcttccttaggaggtcctgatttaagcactttgaaggtcacagaactaagagaacttgcgaaatctcgaggaatcaaaggatattccaagatgaagaagaatgacctggttgaactgctgagcaacatggcttga</cdnaseq>

Protein Sequence

<aaseq>MLLPPHPGRTLPAYHGDNRFLLGACFLSKLPMLRPMKLSLVCSA NPNNHRSRSSDITRHQKGGSARRKSKPYQEKDDSENIDEFDTDIMSSKNGPPISLTSN SRPQATSVPGEREKEIVELFKRVQAQLRARGKGKEEKKPEQAKAQGERGSVDSLLNLL RKHSVDQRRKSGDEKEQSVDQTKRSNESGNKQNSSIFIKNDTQEEQKKPHPAAFKRPA SNFRRRSPVPNVKFQPVTNVDAERVINNINDAVQEAKPTLENKAATDEPDSVSTFEPN SVIEPENLSLDDLDHISDDEPDASDTDEPSGEYDEPSLQIPSVPIIDESHDTTLKSSL GGPDLSTLKVTELRELAKSRGIKGYSKMKKNDLVELLSNMA</aaseq>

Gene Sequence

<dnaseqindica>2575..3680#85..106#agttcgcccgccgccgccgccgccgatccccatccatcccgcgaggcgcgagcgagcagggcgccgtcggcgccgtcgttcgtcatgctgcttccgccgcatccaggtgagcacatcctccgccaccgccgcctgcgccgattcccatccatccatcgctcgagcgagcgagcggggtcgccgtcgcttgtcctgctgcttccgccgcatcccttacgacgcacatcctcttgtctcatctccctctctccacccacgcaattttttttctcgaatttgcgttaaccctagcttcgttgtagtagaaatttgccttaaccttaatactaacaaatgtttgttccgaaaaaagtttggggttgggggggggggggtggggttcaacttaacccctatgtcccatgtcagatccgccactgctttattgtgtgtggcgcattgtctcttagctcttttaaggaaaactaactatcgttctctatgaaatctggctcgcattttctttcaaaaaatctggctcgcacgcactgctggtgtaaatatgatgatacattgtaagaatgaaatatagagttattaagtttagtttctttagcaagttattaatgattcatacactgtttatgagtgtgccattttacccaggtttccaaaggctgcttgctggcacagcttggagaacgtatatggttagaacagtgaaaaaggctttaaaaccaaatgaattattctgtttcctgtcatttcctttaaatatcacgcgatccaaacttctagccctaagtgtggtaagaaatcactgtaggatgatgcatcctcacaagccgtagagcagcttgggaaaaactggaaatttaaaactgtcttagctaaaggaattcttgctgtccgcatattactttcatggttaatttggtgtcaaattacatgcttatcagcatttttagtgctatatgtctggaagcactatatacacaatgataaatgaggtaggtagtataggctactagacctcttgttgatgtctagttccattttgtcatgaataggaaatgctagtgcatcaggatagtgaatattcctccgggagagatcagacggtgacatcttgaggtagaagaatgataagtgaaatctattgaataacacatgaatagaatttcactctattagggtccactaagccaaggctagatatgttcttttccatagcagcttgaaaacaccagccgttggttatctgttatgtactataatatatactgcctctgtaatgttggtacctccatttgtaaacatgatggtttggagatgggtggggtccccaataataaaagactatgtgaataactcaccttttatgtgaaactaatggtatcaatttcacatcaccatcttaatagaactttatatatcagtggttagagttaaagaagtatatctgtggagattctaaatcatcaatcattaactctttgtactttgaaaacagacatatggatgtgtttttgtgcattgaaaacctgtttgaacttaattagatgatcggttggtactgttcttgcaagtttccttagccccattcttcttgatcaaggttttcatctacctctatcttccaggatgcattgtattgaaaaaatgtttcaaatctacttctagttaggtaggtagacttccagcctttattttcctctctttttgctatcatgtttaagaactcaaagcacaatggaacttgtggctaaaactcacagcctcactggcagcgtgatagaaggctaactgctagtgcaagtaatgctgagagcaaacattatatgagtgggcatggtatgttttaccagagtaatgcgcttgattaatgggctgaaattgtaatgaaccttcacatggacatgaaacagaccagctgaaattgaatggcttcttcttccctaaattgctttcttgatttccctattacagcttcctctgccctgcattcatccagataggattaaattgttaaggcacatagcaggtctacattaaatggcccatacattttatccaaatcttacccatatgggtcagatgtgtatgattgtatgctctgatctgtagcggcttatatttttccttttagttaattgtaaccgacaagctgggctccacatgatatttatatgttttggtaatgcaaccttttcgtaaaagagaactattcgttattttaacatacaaacacatcctttttcatttcattttttagaagttaattacgtgtgaatgatcatagcaggtcatgtatgtgaacactgctgactcaacatgaaactgccactgataaacaaatatagaaagaaggaactgcttatggcactatgatttttttaaaaattttatgcactttatgtacacttgttttcgcattatgggaatggggtgaagtggaaaaagaaagttgtgccatggccatctgtatgtccaacttctatgtatctatatatcttgtgtactgcgaacccttcaatctgaaacatttagttttcgtccttattcattactatgctattgtttcttgggtttcaggcagaacattaccagcctatcatggagacaacagatttcttcttggagcttgtttcctgagtaaactgcctatgctgcgcccaatgaagttgtctttggtatgcagtgctaatcccaacaaccataggtcaagaagttcggatatcacacgccatcagaagggtggatcagctcggaggaaaagtaagccttaccaggagaaagatgactctgagaatattgatgaattcgatactgatattatgtcctccaaaaatggaccacccatctctttgacaagcaattcccgtcctcaagcaacatcagtcccaggggaaagagagaaggagatagtagagttgtttaaaagggttcaagcacaattgcgagcaaggggaaaagggaaggaggagaagaagcctgaacaagcaaaagcacagggtgagaggggcagtgttgactcccttctaaatctgcttaggaagcactcagtggaccaacgaaggaagagcggtgatgagaaagaacagagtgttgaccaaacaaagagaagcaatgaatctggaaataaacaaaattcaagcatcttcataaagaatgacactcaggaagaacagaaaaagccacatcctgcagccttcaaaaggccagcttcaaattttaggcgaagatcccctgttcctaatgtaaagttccagcctgttaccaatgttgatgccgaacgagtcatcaataacatcaatgatgccgtacaagaggctaagccaactttggaaaataaggctgctacagatgaaccagactcggtttctacattcgaacctaattctgtaatagaaccagaaaacctatctttggatgaccttgatcatatttcagatgatgaacctgatgcttctgatactgatgaacccagtggagaatatgatgagccatctttgcaaatcccaagtgttccaattattgatgaatctcatgatacgactctgaaatcttccttaggaggtcctgatttaagcactttgaaggtcacagaactaagagaacttgcgaaatctcgaggaatcaaaggatattccaagatgaagaagaatgacctggttgaactgctgagcaacatggcttgatccatcagcagccctgtcaacttggctctgttttgtcccttgttagtcacattgtcttgggcatatgcactatcttgccattcctatcttatctagatgaagttcttttaggtagaaaactgtaaatgagcaaggtaaacaatgttctgttctggttttatcgttgccctttctgttacctagcctctagttaccattgtttttgcgtaaatccttcatcagaattgaaccctggattggccataagactggcaacgattcgacgtcatgctgattatgttctgatgtgtagtgttctattcttatctctgttgtttctcctttctcatggcagctcttgtctgctgttgcatggtttctctcgtttacatccatggttgttactgaacgtttgatgcacaagtcttttgtgtgttcatgaaaagaataagcagaagcaacctataatggatttctttggtgttcaatcgtttactgtctttgttcagagccaaggtactgattgggaggatttcctgggaattgtctgcctcccgattatcaattcaacaatcagcttcattaaggaaaacaatgcaggcgatgcagctgctgcactcatgtcccggttggcgctaaaaacaaaggtttttttttctgaacagaaatttaaaaattgcaagtgaatccattgtgctagtctgatcttgttgtatacatggatttgctaccaggttcttagagatgagcagtggcaagagcttgatgcttccacattggtacctggggatataatcagcatcaggtttggtgacattgtccctgcagatgcgtgcctacttgagggagatcctctgaaaatgaattgccacacgccgttcatgcgaaagatgtcgatcactggaatgtcagactagttgctccgtgtaaataatttgatcacatttttgtttgtccttcatcttgtagtcagctctcactggtgaatcccttcctgtcaccaaaagaaccggggaccatagtgttcactggctcaacatgcaagcatggtgagattgaagctgttgtcattgcaactgggatacactctttctttggcaaggcagctcatctagtggactccactgaggttgttgggcattttcagaaggtgattcatcaatctttagactgtaataagattataagaacctcacaagtggatgtgctgtaagctgtttctaaccactgaattttctgattcttacctccataggcaacttctgtatctactcaatcgccattggtgtgattgttgaggttataatcatgttcccaatccagcaccggtcataccgagatgggattacgacttccctctgtttatggttctgatcatagccatactaaatgatggtgacgatcatttctctctgaattttactgtttctgaagcataaatatataggttcggcatctgctttgatcaggaactatcatgacaatatcaaaggatcgcgtgaagccatcaccaagcccagatacttgcagctggagttgtcatcgtagcctaccttgcattggtcaccatgctgttctatttgtaactcctcaataggcttcatgtctgcacattaccagaagcaaattttcagatgattgcataaaatagataacaaaacaaagtatgatgatcagcaaggctgatatcaggtaagcatacgtttaacttcgtttgaagggaatgaggtgaatggttgctgctgttcaaagtgttcttccattgcagctttgcgttttcttctccttatcacaaagaatgcaaggactgccccagagcttccaccaaaacatgaaccaccattgtcttgacctgggctgtttggacggtttggtggaggggggagctgtatatgatggaggtggtggatttccgtcaattctgtacacaaggatcataataggtcagtgtacaactctcatttttgcatgttcataagccaggagaactcactgtagattgtttaacttcttaatttgactaggaatccagccagtgaaatgattttttgcaacattcctatataggaaagcaaagatatgagatgtggtactgcacgtgcaaataaaatattaattacttataggttgatttcttacagatcatcaagggagagattagcaaggacattgatataaccagtaaatttattgttctgcagatatctgagaagaacgagtatgggatcacaggcatatcactctaaaaagacatatctatgagataaaaataatccaaaaataatcctttttcttacaatgcctgtaatcccatgctcgtagatatgcctgtaaacccatattcgtagaaatatctatttttatctcatagaaatacacacacacatacatatgtacagcattcattataagaaacgtgataacaaaaaaaaaagaaagtcactttttcgagttgccgaaaaaagaactcatacttattttttctgtagagatcagcgagtttcagctactagttccatggagctcgtactgctcgtgcgtgtgtacttcctttaggtggtataacttgcgacagaggttcttttgctcctcaagtacaggcccaagttgggccacaagttgcgtgcccacaagcaaaaaaaaaaaaatcacctgtgaaaaggtaatgccaagtgctaacgacttggattggtcgctgtaaactcacgaaatgcatagtaatatgcatttgtgctttcacgtcagtaagatgtgatgggtgcctaacctaggccgtgctaatcctatctgttagtttatctgttgactactgtgcatcattttgtccaactttttttagaattacactattttgtccattttgtgtgtgcgtgcattggtctatgacgtatggatgaccataatgaagttagtactgttg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0183100, RefSeq:Os03g0183100