Os03g0184300

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Revision as of 12:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0184300| Description = Glycosyl transferase, family 8 protein| Version = NM_001055723.1 GI:115451174 GeneID:4331856| Length = 5324 bp| Def...")
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Gene Name

Os03g0184300

Description

Glycosyl transferase, family 8 protein

Version

NM_001055723.1 GI:115451174 GeneID:4331856

Length

5324 bp

Definition

Oryza sativa Japonica Group Os03g0184300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4407174..4412497

Sequence Coding Region

4407736..4408294,4411161..4412104

Expression

GEO Profiles:Os03g0184300

Genome Context

<gbrowseImage1> name=NC_008396:4407174..4412497 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:4407174..4412497 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttcgacgagctccgtgggcggctgcggatgggcctggtgaacatcggccgcgacgagctgctggcgctcggcgtggagggcgacgccgtcggcgtcgacttcgagcgcgtctccgacatgttccggtggtcggacctcttcccggagtggatcgacgaggaggaggacgacgagggcccgtcctgcccggagctccccatgccggacttctcccggtacggcgacgtcgacgtggtggtggcgtcgctgccgtgcaaccgttcggacgccgcgtggaaccgcgacgtgttcaggctgcaggtgcacctcgtgacggcgcacatggcggcgcgcaaggggctgcggcacgacgccggcggcggcggcggcggcgggcgggtgcgcgtggtggtgcgcagcgagtgcgagcccatgatggacttgttccggtgcgacgaggcggtggggagggacggcgagtggtggatgtacatggtcgacgtcgagcggctggaggagaagctccggcttcctgtcggctcatgcaacctcgccctacctctgtggggacccggaggtatccaggaagtgttcaacgtgtcggagctgacggcggcggcggcaacggcggggcggccgcggcgggaggcgtacgcgacggtgctccactcgtcggacacgtacctgtgcggcgcgatcgtgctggcgcagagcatccggcgcgccgggtcgacgcgcgacctcgtcctcctccacgaccacaccgtgtcgaagccggcgctggcggcgctggtcgccgccggctggaccccgcgcaagatcaagcgcatccgcaacccgcgcgcggagcgcggcacctacaacgagtacaactacagcaagttccggctgtggcagctcaccgactacgaccgcgtggtgttcgtcgacgccgacatcctcgtcctccgcgacctcgacgccctcttcggcttcccgcagctgacggcggtgggcaacgacggctcgctcttcaactccggggtgatggtgatcgagccgtcgcagtgcacgttccagtcgctgatccggcagcggcggaccatccggtcctacaacggcggcgatcaggggttcctgaacgaggtgttcgtctggtggcaccggctgccgcggcgggtgaactacctcaagaacttctgggcgaacactacggcggagcgggcgctcaaggagcggctgttccgggcggatcccgcggaggtgtggtcgatccactacctggggctgaagccgtggacgtgctaccgcgactacgactgcaactggaacatcggcgaccagcgggtgtacgccagcgacgccgcgcacgcgcggtggtggcaggtgtacgacgacatgggggaggccatgcgctcgccgtgccgcctgtcggagcggaggaagatcgagatcgcctgggaccgacacctcgccgaggaggccggcttctccgaccaccactggaagatcaacatcaccgacccccgcaagtgggagtag</cdnaseq>

Protein Sequence

<aaseq>MFDELRGRLRMGLVNIGRDELLALGVEGDAVGVDFERVSDMFRW SDLFPEWIDEEEDDEGPSCPELPMPDFSRYGDVDVVVASLPCNRSDAAWNRDVFRLQV HLVTAHMAARKGLRHDAGGGGGGGRVRVVVRSECEPMMDLFRCDEAVGRDGEWWMYMV DVERLEEKLRLPVGSCNLALPLWGPGGIQEVFNVSELTAAAATAGRPRREAYATVLHS SDTYLCGAIVLAQSIRRAGSTRDLVLLHDHTVSKPALAALVAAGWTPRKIKRIRNPRA ERGTYNEYNYSKFRLWQLTDYDRVVFVDADILVLRDLDALFGFPQLTAVGNDGSLFNS GVMVIEPSQCTFQSLIRQRRTIRSYNGGDQGFLNEVFVWWHRLPRRVNYLKNFWANTT AERALKERLFRADPAEVWSIHYLGLKPWTCYRDYDCNWNIGDQRVYASDAAHARWWQV YDDMGEAMRSPCRLSERRKIEIAWDRHLAEEAGFSDHHWKINITDPRKWE</aaseq>

Gene Sequence

<dnaseqindica>563..1121#3988..4931#aggcaaaacagcgcgcacctcagctcgcgacgcgcgccaacctcgccgccgaagcacgacacgaggacaagctagcccggcgcggtgtgccattggcatgggggtgacgggcggcgccggggaggccgtcaagccgtcgtcgtcgtcgtcgttgtcgccggtggcggggctgagggcggcggccatcgtgaagctgaacgcggcgttcctcgccttcttcttcctcgcgtacatggcgctcctcctccaccccaagtactcctacctcctcgaccgcggcgccgcctcctccctcgtccgctgcaccgccttccgcgacgcctgcaccccggcgacgacgaccaccgcccagctctctcggaaggtaaggtgagtccaccattcgtgcgtgcgaccgacgtccgtcaaaaagctaagcttcgatttccgacccaccatgtgttcgagagattgcttacgaggaattggctacacctgtgttttgcagctgggaggcgtggcggcgaacaaggcggtggcggcggcggcggagaggatcgtgaacgccgggagggcgccggcgatgttcgacgagctccgtgggcggctgcggatgggcctggtgaacatcggccgcgacgagctgctggcgctcggcgtggagggcgacgccgtcggcgtcgacttcgagcgcgtctccgacatgttccggtggtcggacctcttcccggagtggatcgacgaggaggaggacgacgagggcccgtcctgcccggagctccccatgccggacttctcccggtacggcgacgtcgacgtggtggtggcgtcgctgccgtgcaaccgttcggacgccgcgtggaaccgcgacgtgttcaggctgcaggtgcacctcgtgacggcgcacatggcggcgcgcaaggggctgcggcacgacgccggcggcggcggcggcggcgggcgggtgcgcgtggtggtgcgcagcgagtgcgagcccatgatggacttgttccggtgcgacgaggcggtggggagggacggcgagtggtggatgtacatggtcgacgtcgagcggctggaggagaagctccggcttcctgtcggctcatgcaacctcgccctacctctgtggggacccggaggtaagctaagcacaatactccatctctttcatattattagtcgtttgattttttttaagtttatttttaatacaaaataaacatattatcaaaatatatttaatgttgaatttagtgagactggtttagtgtcggtgtttctatcttttctataaatttaattaaaactaaagaagtttcactaagaaaaaaagtcaaacaacttataatatgaaacaaagggataataactatttagatgatattgttctttgagggatcaaaatgttttcttgtttttttttttttgctcgcaccctggttaattggttttcttctccgtgagatgcacgcgctcacgccatgcatgcatgttagtcaagcatgaaaacaaagtaggggaaatatgacaggtgataaaggggaaaaaagagaaaaattggtggcacatatgtggttcagcttctagaaactaaaagagagaatatatcatgatcacactgagacaggatacacatgtgagaaattttaaagaaatgcagaatagctaaagaagtttcagagatcaatagcttaggtttattttcagtctgttccgttagtatctgtggagaactggccactgaatgattaattattactccaaccatcaattaatggtttacagtaacctttagccaataggatatgcgaattataaaaaaggtagtaaacacctagtttaaaggggacatttttttccattacaagtttttatgcaaaacaaaaatctattgtggattttactactttttgtgtttgaaaaaaaaatacttcaatatgccaaggccatgcatgcacataagaacaaaaaaaaaacggatgcaggaaaatagaacattagcatcagactaaggaaaatagaacattagcatcagactaagacatgattcaattcagagaagtgttcccaactgctggttagacgcataacatgtcacctaatgaaaaccgatcagcatcaatacagcacacccacacaattaatcaagcaagcacagcataattaaccaatcagcttttgtcccataatcacttgtagggatgtatgcgcttggaatgtgaatatatgcatgatcagtgtgtgaggacgatttaacgagggtgtgtgtgggacaaagccacccaaagagcgtaggaatctggtcgggaaatgttgccaaaggccacgagctgataatggacaaggttctcatcatcaattcatcatcatcactcgactttctctttagcaaaacatacactaggatcgagtagtccccattattcctaccaaacctgaagaatctgatcccttgctagctatagcttgatcgatcgatcgatcgaggtgacgattcgttgattcaggttgaaactgaagcctccaatcaatcaacttgaattgtgtttagtcctgttcgatcgtcgacgctctattatattcataggagtactgacgatcgatccggttggtgcaacagtaaatctgttcctttttcgtaactgcatttgcaaccgttggtcttcagattatacggttcatcaggtgttgattaattgctctaggttgattagagtgtgtaccagcagaaactagctagctagcctatcgttgatcagcacagtggcatcccacctgagtggaagcttctactggtaatcatggatctatcactgtcagtgttatccacaagctagctagcgagagctaattaagctaaaacctgtccttgcaagagcagatagatctagccatctagggcctaggtctactgcctaaaccaatcgatcaacacacattattcacagttgataaaaaaaatatactagcactaaatattaattacttaagggattgatctgatgataagtactcctagcacactactcaattgctcataggatgccacacgcacagtacggtttgtacatgttaatagatcaggatgcacatggagatcgatggatgagcattgacagattaatcaagaaaagattaattaattagaagaggatgacgaccactcatagattaattagaagaagatgataaatgggcagagactggggcctctttcacctaacttgtgataggcatgcagctaagctggttggaagcctttcacctccaaccgtccgatcagtcgaacactatgatggcaacaaatgcatactacatcgatcggtcgacagggctgattaaactagattcggttggtggccagccggccggacagctgcgtgtagctaaatggatactactctagatggatagatagagatagcttgtgcatgaaccaattaatacttgcattgcatgctactacattcgtctccatggcggatgaccagatatctataccaaccgtacgcaatatcgtcgcaaattaagtttattgcttgatcttaccttgtgcaattcgatttgattctttggtggttttgacttgtctgacacttctagtttgttttaagctaagattatacagtatattcatactattcagttggaatagttctttttttttagcttagttggaatagttcaagaagtgcatgaatgatgcatgtgccacgcactacggatcgagtacatatactatatagttaagaaatagatttattgatctgctaaaagattaggaaaaattcttcgtcgtacgcactagtttttgagttcagatcaccttggacttttttctttttttttagaactgatcaccttggacttggagtaaatttgttttcatggataggtaaattgtcagatcaggcacagtgcagtttcgcaagaatctagcacgtgttcttctctggcgtaagctgcagtcaactaatcaagcaattaattaatgaattaacgcaggtatccaggaagtgttcaacgtgtcggagctgacggcggcggcggcaacggcggggcggccgcggcgggaggcgtacgcgacggtgctccactcgtcggacacgtacctgtgcggcgcgatcgtgctggcgcagagcatccggcgcgccgggtcgacgcgcgacctcgtcctcctccacgaccacaccgtgtcgaagccggcgctggcggcgctggtcgccgccggctggaccccgcgcaagatcaagcgcatccgcaacccgcgcgcggagcgcggcacctacaacgagtacaactacagcaagttccggctgtggcagctcaccgactacgaccgcgtggtgttcgtcgacgccgacatcctcgtcctccgcgacctcgacgccctcttcggcttcccgcagctgacggcggtgggcaacgacggctcgctcttcaactccggggtgatggtgatcgagccgtcgcagtgcacgttccagtcgctgatccggcagcggcggaccatccggtcctacaacggcggcgatcaggggttcctgaacgaggtgttcgtctggtggcaccggctgccgcggcgggtgaactacctcaagaacttctgggcgaacactacggcggagcgggcgctcaaggagcggctgttccgggcggatcccgcggaggtgtggtcgatccactacctggggctgaagccgtggacgtgctaccgcgactacgactgcaactggaacatcggcgaccagcgggtgtacgccagcgacgccgcgcacgcgcggtggtggcaggtgtacgacgacatgggggaggccatgcgctcgccgtgccgcctgtcggagcggaggaagatcgagatcgcctgggaccgacacctcgccgaggaggccggcttctccgaccaccactggaagatcaacatcaccgacccccgcaagtgggagtagattgcctcgccggcgatcgccgccgtcccgtccccgtacgacgtggcagcttgctagcttagctgggctgggctgggatgggctggctggccgcatttagaattttgggcctccgttaattctctcttctttaacctctgttcatatatacacgcacagggactatagatttactaagccctcggtgaataattcaatcacaagtaaataattgagtaaaatgaagtcacctttttattgtcaaagttttactttggatcacacttaaaccaatcttttcattttagaccggataactttgcctatagtatttggcttggatcaccccactctctttactattcatgtatagatatgagcagcatataaaaggggaagttcaccattataccg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0184300, RefSeq:Os03g0184300