Os03g0185200

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Revision as of 12:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0185200| Description = TPR-like domain containing protein| Version = NM_001055730.1 GI:115451188 GeneID:4331862| Length = 5562 bp| Definit...")
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Gene Name

Os03g0185200

Description

TPR-like domain containing protein

Version

NM_001055730.1 GI:115451188 GeneID:4331862

Length

5562 bp

Definition

Oryza sativa Japonica Group Os03g0185200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4448903..4454464

Sequence Coding Region

4453024..4454445

Expression

GEO Profiles:Os03g0185200

Genome Context

<gbrowseImage1> name=NC_008396:4448903..4454464 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:4448903..4454464 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttcggacgcgccaggtgctcgacctcggcccccgccgccggcgagcggcgcgctcttcccgtcgaccctctctccctccctcgcctactcgtctccgccgccaccacccccggcgccgccgccccggccgtctccaccctacacgccgccgctctcaagctgggggtcctcccctcctcgctcccggcctccaacgccctcgtctccgcctactccctctccggcctcctcccctgcgcgctccgcgccttctccctcatcccccacccttccaccggatcctacaccgccatcctctccgcgctctcccgccacggccgcccccgggaggccctctccctcttctccgccgccgcggtcgcccgccccgacgccgagctcctctcctgcgtcgtctcctgctgccgccgcgcatccgcctccctccccgctcgcgccgcgcacgcctacggggtaaagaccgcgccactgctggccttctacgcctcggccggcccggcgctcgtcgcgctgtatgcgatgtgtgggagggtgagcgcggccaagaggatctttgatcgtatggacggcgaggacgtggtgtcctggaacgcgatgattggggggttcgctggtgccgggatgaatggcgaggcgtgggattgcttccgggagatgcgcgcaagaggtgttcgagggaatgcccgtaccgcggttgctgtgctgggggcttgtgatttggagtctggaagacaggtccatgggcacatggtgagaaaccatggtgatagtggttcaaacgcaattctgtggaatgcgttgatgaacatgtattcacgtgttggatgtgtcgacaatgcagaacatgtgttcttcgagattgaacggaaggatgttgtgtcatggaatgtgatgataggtgctttcgcaaagaatgggcatggagagagggcacttgaacttgtggatgcaatgttgcgttgtgggatgcagccagattcagtgacattcacaactctgctcatggcatgctgccactgtggcttggttgatgaaggtcttgcgctttttgagcggtttgtggaaaattctgccctcatccctactatggagcagtgtgcttgtattgtggatttgctttcacgagctgggaggttcagagaggctgctggatttattgatcagatgccaatcagaccaaatgcagttgtatggggtgctttgttatctggaagtaggatgcaccatgatgtggatcatgcacagatcgcttttgagaaactggttcaattggagccagataaccctggaaattttgtgactatgtcaaatatatatgcaaaggccggaatggttgaggatgcaaagagagttaggatgatgattgacagggaggagttagtgaagccttctggacaaagtcgtgttcaagctatgtaa</cdnaseq>

Protein Sequence

<aaseq>MFGRARCSTSAPAAGERRALPVDPLSLPRLLVSAATTPGAAAPA VSTLHAAALKLGVLPSSLPASNALVSAYSLSGLLPCALRAFSLIPHPSTGSYTAILSA LSRHGRPREALSLFSAAAVARPDAELLSCVVSCCRRASASLPARAAHAYGVKTAPLLA FYASAGPALVALYAMCGRVSAAKRIFDRMDGEDVVSWNAMIGGFAGAGMNGEAWDCFR EMRARGVRGNARTAVAVLGACDLESGRQVHGHMVRNHGDSGSNAILWNALMNMYSRVG CVDNAEHVFFEIERKDVVSWNVMIGAFAKNGHGERALELVDAMLRCGMQPDSVTFTTL LMACCHCGLVDEGLALFERFVENSALIPTMEQCACIVDLLSRAGRFREAAGFIDQMPI RPNAVVWGALLSGSRMHHDVDHAQIAFEKLVQLEPDNPGNFVTMSNIYAKAGMVEDAK RVRMMIDREELVKPSGQSRVQAM</aaseq>

Gene Sequence

<dnaseqindica>20..1441#gggatttacagagcgcgcaatgttcggacgcgccaggtgctcgacctcggcccccgccgccggcgagcggcgcgctcttcccgtcgaccctctctccctccctcgcctactcgtctccgccgccaccacccccggcgccgccgccccggccgtctccaccctacacgccgccgctctcaagctgggggtcctcccctcctcgctcccggcctccaacgccctcgtctccgcctactccctctccggcctcctcccctgcgcgctccgcgccttctccctcatcccccacccttccaccggatcctacaccgccatcctctccgcgctctcccgccacggccgcccccgggaggccctctccctcttctccgccgccgcggtcgcccgccccgacgccgagctcctctcctgcgtcgtctcctgctgccgccgcgcatccgcctccctccccgctcgcgccgcgcacgcctacggggtaaagaccgcgccactgctggccttctacgcctcggccggcccggcgctcgtcgcgctgtatgcgatgtgtgggagggtgagcgcggccaagaggatctttgatcgtatggacggcgaggacgtggtgtcctggaacgcgatgattggggggttcgctggtgccgggatgaatggcgaggcgtgggattgcttccgggagatgcgcgcaagaggtgttcgagggaatgcccgtaccgcggttgctgtgctgggggcttgtgatttggagtctggaagacaggtccatgggcacatggtgagaaaccatggtgatagtggttcaaacgcaattctgtggaatgcgttgatgaacatgtattcacgtgttggatgtgtcgacaatgcagaacatgtgttcttcgagattgaacggaaggatgttgtgtcatggaatgtgatgataggtgctttcgcaaagaatgggcatggagagagggcacttgaacttgtggatgcaatgttgcgttgtgggatgcagccagattcagtgacattcacaactctgctcatggcatgctgccactgtggcttggttgatgaaggtcttgcgctttttgagcggtttgtggaaaattctgccctcatccctactatggagcagtgtgcttgtattgtggatttgctttcacgagctgggaggttcagagaggctgctggatttattgatcagatgccaatcagaccaaatgcagttgtatggggtgctttgttatctggaagtaggatgcaccatgatgtggatcatgcacagatcgcttttgagaaactggttcaattggagccagataaccctggaaattttgtgactatgtcaaatatatatgcaaaggccggaatggttgaggatgcaaagagagttaggatgatgattgacagggaggagttagtgaagccttctggacaaagtcgtgttcaagctatgtaagaaggtatatattttggctattcttgcctgcattataactcatcatcaatgatagcttattgtttgtgctgggcagtgtaatatttcttatttctaacccatcatcaatttggacatgctcgttagtagagaatagttattactttacaccatgaacaatctatacagagcgtcagttttagactgtcacagaaaaaaaaaatccatttcaccccctgaacagccgggttgcctactttatcaattgcactacaaatccacctaatacttcccctgtaccgtgtgagaatttctaattacctcccaggttttgccaccatggatgtatagacctttcccccttttatgtttaaatgtttttatcccctgtttcagtaattatgcctaattatgctctatttgctatgtccatatattgtacagtgacagcaagtaaatacctggctgctagactgttaggcctaagtaagacctacccttttctgtaagcttgatttcttgttgcaccatccttcaagtaattgtatagctacaaaagatgcaccacctctgtggcctctgttgtttttgttcttcacaataatgtaccttttgttcgtactggtatttcttcctacgaagatggcagagactatgaccaataacctaccttctgttttgtaactgcacagaatgggttatgaatgcccagcattctttagttactgtgatttttttctctacgcttcattttaaaaagataacaacgcaatctttctatttgcatctcttctaactgggtaataaacaaattgcatgctaataaaactttcaatgtgcgcagttgcttttagtcatcatgatttgtctaccgtgcttcagagtgcagcaacactcatgcatccactaccaacagttcatttggtgtctaccattggatatggtattatcccaatttctccgttgcccccttgtgtttcagtgtttatgtgtttccggtgctgcccatgttgtctatgttgttgtaatcacgaactttttctagttttagattttgttcctttccatgtcatgcaaaggaagttcattcctaacctattcttacgctgtgttcggcagctggagaaagagagatagtttgttttgttttccgcgcgcacgcttcccaaactactaaacggtgcgttttttgcaaaaattttctataggaaagttgctttaaaaaatcagattaatccattttttaaatttaaaatagttaatactcaattaatcatacggtaatggctcacctcgttttgcgtatcttcccaatcttctcaatccccttctcctcaaactcacctagtatggctgtaagaatttgtaataaatctagaatgtgtagataatagcacatcttgtgaggaatctttggttccttcatctgaattttgatatttatgtcaatgaagatgctattaatcttgttaagtaccagacatgtgaattagttaaggccatttgtagcaactagttattttcctcgtgtaaaatctttatgttctgtactggattctttattcaggacaaggtttgttcactaagaggggatttaagggcttgttcagcacccagggtcctctgccaaggttaactattgataatgtgaattcagttcttctgtacatgaaaatcatccagacaccttgctcataacataaatttatcggatcaaagttttgcagttctctctggcgtccattgtctagttgtgtgcctgttgagaaggctgcgtggcaaagatgacagtatgtgcattgttttagttccctattttctgttaacatcgtgctagttttttagatgtaacatcttggtagttgaatatatagcactaattatgaattcttcatttgcagttgttaatgctggaatagctggttgttgcactagccttgctttgagctttccaggtatgttctcattgaatgcacatggtattttttgggggggtatgatgttctatgggggaatatagtgcttcatgatacattgatatttttgtctcaattcatttcagcagtgaactgcaatacatgtctacattagagtgaatctccatgattgttgtggtgaggatagctgtttgtagttggcaaactgtgtgtctgatccaatgatcactagttttatttctggtgtgcttccggtcttgaaatgatttttgacataaagtttgtctagaaatacaagactgcaactaattgctgtagatttccttcaaataggccctagtatacgtgtataaaattttagaatcttgatggcccttgtgaccttgtccttgatcgtgatatttaatatgatagagttagagacagcggttaaatttaaacctgccctggattggcgcctccatagcgttttgcataggcgtggccgtttcccgtgctatccacgtcggccccgaaactccaggcagccgaatttcacgagcgagcgggaggcccgcgttgactctggtcgttttacaaaaaaagcccttgctattattgataatctgtgataagtcccttgtcttcgtttatgtgttctgtattcttactttaaggccctccaagacctgaaatatcttatgctaagaagagaaaaaaaacgaaaaataggccgcactttaaataacaacaagtgagtggccttttttgtaaaaacgaacaaccctaccacctggcggccggcgcccacccctcaccccaccctcccaaaccctagccgcctctcttccgctcttgcagccggcctgcacatccccttctgtcaggagatcgatcgccggcgaggagtcggagatggagtgccggcgtggtcccccaggttgacggcggtggaggtgacgacgatggcaccggtccgaagccgcgaggtcgaggaagagcagatcgggaggagacatggtgtccagatctagaaaagacgttccacagcgaggccgatggtggagggggtcgtcaaagatggctagggctagagatgttcgcaccggcgctgtcgcccgtgacgaagaggcccgcctctaactcgagcggctcaccaatgtctggctgagcgccgcccgctggtggagggaaggttgacgggtccaaggagcgtgaccacggtgccgagcaccacgctcagctccgtcaccaccagcaagccccgcgccgacattacgtcccctcgagcggtcggccgcttcgccggatcagtggaccatcgctggcgtctgtccccctgtcggctgcctcctcaccgttgctgatgcctcctgagcagctgagctctatctcctccgccgattagggatggcaggtgtagaagcacaaatactaggttcgatgagatcttggatggaccacggaaatggcacagtcgctgccatattcacctgcaactcctccgttgcaattcgagatgaacagagaaattgcaatccccgatatggttccttcttgtcggtaagagatggccctctctgtcttagtgtcatggtttccattgattggtgtcaggcgcaatgcaaggtagccagatcagaatacattagatggcaaggcaaggcagccacatcagaatgcatactctgttttttctcctttttctgtgacagcaattcatgttgaatgtggacccaagttcaagaatgttatgtatcatgcttttagttcaataaatatcaataatccatctatgattttgcataatttccagtgaacaaagtactaatgatttaaactacatattaatagtagtgtcctgctgtaggtttaggattcaatgaataattggattgtgcttctgcaaggtaagcagagttagatgggagttgtcatttctctctgaatttattatttttgttcttaactgctacttaaattagtgggggtctattgttactctctaacagataacaagattgatcttcagaaaaattaggcgaacacaactgcttctaacattgttgattgaattcagatgcagctcatgttgattggcttttgcttgacgaggtcttaccagggagaagaagttaattatggcaaccctgaatctgcatagcattttaatgtctcactgcaacacgttgtctggatattcgtaaaataacatagcagtttcca</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0185200, RefSeq:Os03g0185200