Os03g0185400

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Revision as of 12:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0185400| Description = Protein of unknown function DUF1677, Oryza sativa family protein| Version = NM_001186362.1 GI:297721854 GeneID:927105...")
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Gene Name

Os03g0185400

Description

Protein of unknown function DUF1677, Oryza sativa family protein

Version

NM_001186362.1 GI:297721854 GeneID:9271051

Length

1572 bp

Definition

Oryza sativa Japonica Group Os03g0185400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4458012..4459583

Sequence Coding Region

4458195..4459226,4459299..4459547

Expression

GEO Profiles:Os03g0185400

Genome Context

<gbrowseImage1> name=NC_008396:4458012..4459583 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:4458012..4459583 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttcggacgcgccaggtgctcgacctcggcccccgccgccggcgagcggcgcgctctccccgtcgaccctctctccctccctcgcctactcgtctccgccgccaccacccccggcgccgccgccccggccgtctccaccctacacgccgccgccctcaagctgggggtcctccctcctcgctcccggcctccaacgccctcgtctccgcctactccctctccggcctcctcttgggccgtcaccaagattagatccgggggatcggatctctcggcggcggtggcggcggcggcggcgagaatgaacagcccccggcgatttgtgaatctggtgctcgacggcatcgcccggcggcagccgtcctacggcctgcaccgcgtcgacgtctcgacgctgttccgtccgctcgccgccgatgaggatgaagaagggcggcgcggcggcgctatggaagtcgaggacgctcagctgcctcgcgccgccatgatcttccacccttgcccatcatacgggcttccgagttggccctcctccgtggatttcatgcctctcggcagcggcagcggcagcggcagaggcggcgaaaagaacgacgtggtcgccgtcgactacagcggcagcggggtgctgtacggcgccgcctcgcgcgccgtcaccatccttcccccgatgaacacacccaaggccttcccggtgtcgctcaccatcggaggcaacatctacgtcatggaaaggtacccggcctcctcccaatccccctcctcttgcttcgaggttctcgtccacgatcgccacccaaaccaccccttcgccacgccgcactggcactggcgcctcctcccttcgccgcccttcgccttcaccgccgatgatgcccttgatagcatccgcaactttttccaagatgatgatgacttcctcaccgcctacacggccgtcggcggctcatgcatctggatgacagtgcagagcaccgtcgccgccgccgcggggacttactcctttgacacgtccaccgccacatggaccaagctcggcgactggttgcttccgttcagaggccgcgccgagtatgcgcccgagcacaagctctggttcgcgctctcctccgacggcaacgagctgtgcgcgtccgacctcgccgccgcggcgcaatgtgtggaaggtgagccccgtgtcgcccagcggctcaccggtgacgccgcacctcgtccctctcggcgccggcaggttctgcattgtcagattcatgtacaaagggtggaggtccaactttga</cdnaseq>

Protein Sequence

<aaseq>MFGRARCSTSAPAAGERRALPVDPLSLPRLLVSAATTPGAAAPA VSTLHAAALKLGVLPPRSRPPTPSSPPTPSPASSWAVTKIRSGGSDLSAAVAAAAARM NSPRRFVNLVLDGIARRQPSYGLHRVDVSTLFRPLAADEDEEGRRGGAMEVEDAQLPR AAMIFHPCPSYGLPSWPSSVDFMPLGSGSGSGRGGEKNDVVAVDYSGSGVLYGAASRA VTILPPMNTPKAFPVSLTIGGNIYVMERYPASSQSPSSCFEVLVHDRHPNHPFATPHW HWRLLPSPPFAFTADDALDSIRNFFQDDDDFLTAYTAVGGSCIWMTVQSTVAAAAGTY SFDTSTATWTKLGDWLLPFRGRAEYAPEHKLWFALSSDGNELCASDLAAAAQCVEGEP RVAQRLTGDAAPRPSRRRQVLHCQIHVQRVEVQL</aaseq>

Gene Sequence

<dnaseqindica>358..1389#37..285#atggaatggtaatctacgggatttacagagcgcgcaatgttcggacgcgccaggtgctcgacctcggcccccgccgccggcgagcggcgcgctctccccgtcgaccctctctccctccctcgcctactcgtctccgccgccaccacccccggcgccgccgccccggccgtctccaccctacacgccgccgccctcaagctgggggtcctccctcctcgctcccggcctccaacgccctcgtctccgcctactccctctccggcctcctcttgggccgtcaccaaggcaaggggagtagtactactttcccttcgtccttttacgatttcatccaggctctttctcgtcccgttttagattagatccgggggatcggatctctcggcggcggtggcggcggcggcggcgagaatgaacagcccccggcgatttgtgaatctggtgctcgacggcatcgcccggcggcagccgtcctacggcctgcaccgcgtcgacgtctcgacgctgttccgtccgctcgccgccgatgaggatgaagaagggcggcgcggcggcgctatggaagtcgaggacgctcagctgcctcgcgccgccatgatcttccacccttgcccatcatacgggcttccgagttggccctcctccgtggatttcatgcctctcggcagcggcagcggcagcggcagaggcggcgaaaagaacgacgtggtcgccgtcgactacagcggcagcggggtgctgtacggcgccgcctcgcgcgccgtcaccatccttcccccgatgaacacacccaaggccttcccggtgtcgctcaccatcggaggcaacatctacgtcatggaaaggtacccggcctcctcccaatccccctcctcttgcttcgaggttctcgtccacgatcgccacccaaaccaccccttcgccacgccgcactggcactggcgcctcctcccttcgccgcccttcgccttcaccgccgatgatgcccttgatagcatccgcaactttttccaagatgatgatgacttcctcaccgcctacacggccgtcggcggctcatgcatctggatgacagtgcagagcaccgtcgccgccgccgcggggacttactcctttgacacgtccaccgccacatggaccaagctcggcgactggttgcttccgttcagaggccgcgccgagtatgcgcccgagcacaagctctggttcgcgctctcctccgacggcaacgagctgtgcgcgtccgacctcgccgccgcggcgcaatgtgtggaaggtgagccccgtgtcgcccagcggctcaccggtgacgccgcacctcgtccctctcggcgccggcaggttctgcattgtcagattcatgtacaaagggtggaggtccaactttgatttcgacgagaaattcgcggtgttcaccggcgtcgaggttcggcgtggttgtaataagaacagcagcacaacgctccagatggttaatcataggtccagacggtacagccttctcgatagggtatgtgactctcgtgtgttttaaatagaaatttatgaataaaaacacttctcattttgtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0185400, RefSeq:Os03g0185400