Os03g0187400

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Revision as of 12:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0187400| Description = Zinc finger, FYVE/PHD-type domain containing protein| Version = NM_001055744.1 GI:115451216 GeneID:4331879| Length =...")
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Gene Name

Os03g0187400

Description

Zinc finger, FYVE/PHD-type domain containing protein

Version

NM_001055744.1 GI:115451216 GeneID:4331879

Length

2403 bp

Definition

Oryza sativa Japonica Group Os03g0187400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4551484..4553886

Sequence Coding Region

4551791..4551942,4553231..4553681

Expression

GEO Profiles:Os03g0187400

Genome Context

<gbrowseImage1> name=NC_008396:4551484..4553886 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:4551484..4553886 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggattgacaagtcagccgccggatcgtcgtcgtcgccgccgcggccggttgccgccgccacggcggccgtgtgctgcatgtgcggcgaccgtggcctcctgccggagctgttccgctgcgccgcctgcgccgtccgctcccagcacacatactgctcggagcgataccccaaggcagagtcgtacggcacgtgcaactggtgcctgagggcggatcaaggaagcgacggcggcggcggcggcgccgccgccgcctcgagctcgatggcgaggccgcccaccggcgccagagcagcggccggcggcgatccagctgccagcagcagatcgacggcggcggcgaaggtcgtcgccgcccgcgggcacttcgctgccgacctgagcaagcccatcaagaagccaccgccggcgccggcgccgctgccgccgccgtcgccggcacagcggcgtatcctgctgcggcggtcggcgtcggacctgggcggccgcgtccgccgcgccgaccacgacgcgccgccgccgctgtcgcccggcgtcgcgaggggcaggccgagggttcggaggtacaagctcttggaagaggtgatcactactagctag</cdnaseq>

Protein Sequence

<aaseq>MGIDKSAAGSSSSPPRPVAAATAAVCCMCGDRGLLPELFRCAAC AVRSQHTYCSERYPKAESYGTCNWCLRADQGSDGGGGGAAAASSSMARPPTGARAAAG GDPAASSRSTAAAKVVAARGHFAADLSKPIKKPPPAPAPLPPPSPAQRRILLRRSASD LGGRVRRADHDAPPPLSPGVARGRPRVRRYKLLEEVITTS</aaseq>

Gene Sequence

<dnaseqindica>308..459#1748..2198#atggcagcagcagcagcaggaggaggacaaaattaaaggagggcagcttccttccttccttctacaagatcttgagatgcgtgaagtcggcaggcgccgcattaccacctccaattcctcctcttcccaaaccacattcgacttcgacttcgccatcagcaaccaatctgctcccttttgaagtttcgatccgatccattcccaatcccatcccatcccatcgatcgatcgatctcatgcggcagctttaccaatcgatgcgcttgagatagccgcccgattcatcgatcgatctgccgagatatatatggggattgacaagtcagccgccggatcgtcgtcgtcgccgccgcggccggttgccgccgccacggcggccgtgtgctgcatgtgcggcgaccgtggcctcctgccggagctgttccgctgcgccgcctgcgccgtccgctcccagcacacgtacgtatgttttgctctctcgtcaaaattcatttgttaatttgttcgtgttcgtccgcaactgcagatttgggtgttttttttccttaacgaaaataatttttgacacctcccccaacccaatatgagagacatgctagattgattcatttggatttctgggcacatactcagatcaggatagaatcagtttaatttggaatcaatatattcttctatataaattaactgtaagatttacatgaactgatactcttaattggatgagttcataggttaatagccatcgtggattgtttatctgagaaactaactattcagatcaatagcaaactggcacacgatgcagattgtttaattttttcgccatcggaataatccactgacgtacatatgcatgtgcaccacacagttcgagcatgcaaccacttcaatagtttcaattgatcatgcatcgatctctgaaccacaactgctcaacactgctacacatgtaacacattcctctcaactaatgactaatccatctacatggattggccccagaccgtagctagtgatcgaattagctgtgattataagattattgactggcatgtagctgatcgatgacaagccacagttcgtgcgcttttgacgtgcgcgcgtgtctccgagtagtaacttttagcgcgccttccagctaattttgtctgacttttcgcgcgatccgcgcgaaattgtcaaacaaattgattcaaagtagggcgttcgtggctgaaatatatagtacataacacggtcactgtctgcaaatagttcgatctttgttaattaattctgctttctttctctttcccctagcgcttgacagtggctgcgcatgtcagctaggccatatgaatattgttgaaacatctgcgtgattaaagaaaaattatgggcataaatgttgatttaaagcattattgtacttgcttgatcgctagctctaactgtatagtatatggataactataaatataatgaacgcatgcatcgatcttatcttgacaaattgatgaagagttcttttctttttctgaaaaagacgcatgaatattgatcgagacataagtataattcaggattcgccagttttgttgtgttggttcgtttatctccgtgcatggatgtacatatatatacttgtgttgcatgtcagtgtctatctgaaacgtacatgcatgcaataacgtagatcacgcaatcattttccacgtatttacagctaaactgatctgtatatacgcatgtatgatactgccagatactgctcggagcgataccccaaggcagagtcgtacggcacgtgcaactggtgcctgagggcggatcaaggaagcgacggcggcggcggcggcgccgccgccgcctcgagctcgatggcgaggccgcccaccggcgccagagcagcggccggcggcgatccagctgccagcagcagatcgacggcggcggcgaaggtcgtcgccgcccgcgggcacttcgctgccgacctgagcaagcccatcaagaagccaccgccggcgccggcgccgctgccgccgccgtcgccggcacagcggcgtatcctgctgcggcggtcggcgtcggacctgggcggccgcgtccgccgcgccgaccacgacgcgccgccgccgctgtcgcccggcgtcgcgaggggcaggccgagggttcggaggtacaagctcttggaagaggtgatcactactagctagccgtatatatatagagagagaggaacagccatgcatatatagatgcatgcacggtattatgtgtagacagctagtagcatattgcagcaagagctacctgcactgtgtttaagctgttaatatgccccttaattactgtacaggagaacatcttcagttcttcacttgatcatgggttaatcaaagtaagagagttcagactttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0187400, RefSeq:Os03g0187400