Os03g0189600

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Revision as of 12:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0189600| Description = Similar to Alcohol dehydrogenase| Version = NM_001055758.1 GI:115451244 GeneID:4331894| Length = 2966 bp| Definitio...")
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Gene Name

Os03g0189600

Description

Similar to Alcohol dehydrogenase

Version

NM_001055758.1 GI:115451244 GeneID:4331894

Length

2966 bp

Definition

Oryza sativa Japonica Group Os03g0189600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4660690..4663655

Sequence Coding Region

4661021..4661137,4661244..4661405,4661515..4661610,4661706..4661769,4661861..4661937
,4662025..4662107,4662638..4662963,4663061..4663104,4663181..4663314
,4663430..4663466

Expression

GEO Profiles:Os03g0189600

Genome Context

<gbrowseImage1> name=NC_008396:4660690..4663655 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:4660690..4663655 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagatcagagcctgaagcccatccgttgcaaagcggcggtctgtagagcggccagtgagccactgatcgtcgaggagatcgtcgtcgatcctccgaaagcctacgagatccgcatcaagatcatctgcacctccctgtgccacaccgatgtcaccctctggcacaaggtagaccctgcctttccaagaatcttgggccacgaggcctacggggtggtggagagcgtgggggagaacgtggaggggctcgcggcgggggacacggtggtgccgacgttcatggggcagtgcgactcgtgcgccagctgcgcggcggagtggacgaaccagtgcaccgccgtgccgttcaccatgggccccgggatgcggcgcgacggcacaaccaggttctgggacggcgaagggaagccgctcagcgacacggtggccgtcaccagcttcagccagtacaccgtcgtcgacgtcaaccaggtcgtcaaggtcgaccccgccgtgccgcccaaaatcgcctgcctcctcggctgctgcggcggcaccggggtaggagcagcatggaggttggccaaagtgcaacccggttcgtcggtggttgtcttcgggctgggatccgtcggattggcggtagtgcaaggggcaaaaatgtgtggagcaacgaagattatcggtgttgatttgaatcctaacaaagaggaagttggaaaagagttcggtgtgactgatttcgtcaatccatcccaactcggcgacaaatccgtcagtgaggtgatcaatgcgatgacagacggtggcgctgactacagcttcgagtgcatcggtatctcgtcggtgatgactgaggcagtcagaagcaccaaatcaggacggggcaagacgatcattctgggggtcgagaaggacagccagccgttgtgcctgccgtccttcgagtttctgttcggcaagtgcgtcatgggatcgctcttcggtggggccaaacccaaaactgacatcccaatcctcgccgagaaatgcatgaacaaggagctggaactggagaagctggtcactcatgaggtaggcctgacggagataaacacagccttcgatttgcttctgcagggaaagagcctgagatgcatcatatggatggacaagtga</cdnaseq>

Protein Sequence

<aaseq>MEDQSLKPIRCKAAVCRAASEPLIVEEIVVDPPKAYEIRIKIIC TSLCHTDVTLWHKVDPAFPRILGHEAYGVVESVGENVEGLAAGDTVVPTFMGQCDSCA SCAAEWTNQCTAVPFTMGPGMRRDGTTRFWDGEGKPLSDTVAVTSFSQYTVVDVNQVV KVDPAVPPKIACLLGCCGGTGVGAAWRLAKVQPGSSVVVFGLGSVGLAVVQGAKMCGA TKIIGVDLNPNKEEVGKEFGVTDFVNPSQLGDKSVSEVINAMTDGGADYSFECIGISS VMTEAVRSTKSGRGKTIILGVEKDSQPLCLPSFEFLFGKCVMGSLFGGAKPKTDIPIL AEKCMNKELELEKLVTHEVGLTEINTAFDLLLQGKSLRCIIWMDK</aaseq>

Gene Sequence

<dnaseqindica>2519..2635#2251..2412#2046..2141#1887..1950#1719..1795#1549..1631#693..1018#552..595#342..475#190..226#attcatgttttgttttctatcgcatgtattgactaaggataggaaatcaaacctaccacatatgggtgaaatcgattattcgttccatcatgattggggtaggttagttagggatctatttatagccacagaacattgccctggagaatacactgctgcagtgctgcttaagctcgccatccagccgcaatggaagatcagagcctgaagcccatccgttgcaaaggtacacaattcacttacagagatcagatctgcatagctccttggtactactactactactactcaattcctcacgcatgatatatgattgatacatatcgacgacgacgatgcagcggcggtctgtagagcggccagtgagccactgatcgtcgaggagatcgtcgtcgatcctccgaaagcctacgagatccgcatcaagatcatctgcacctccctgtgccacaccgatgtcaccctctggcacaaggtatacgtacgttcccccatctgatcaaaccatgtgaaagaatcacgtataatttgcttttataatttcataataggtagaccctgcctttccaagaatcttgggccacgaggcctacgggtatgttcgttcttccctgatgctttaattttcctcttcgccaatccgaaaattcgaattcgagaatctctaactatatctgtttgttttttttaagggtggtggagagcgtgggggagaacgtggaggggctcgcggcgggggacacggtggtgccgacgttcatggggcagtgcgactcgtgcgccagctgcgcggcggagtggacgaaccagtgcaccgccgtgccgttcaccatgggccccgggatgcggcgcgacggcacaaccaggttctgggacggcgaagggaagccgctcagcgacacggtggccgtcaccagcttcagccagtacaccgtcgtcgacgtcaaccaggtcgtcaaggtcgaccccgccgtgccgcccaaaatcgcctgcctcctcggctgctgcggcggcaccggtgagcctgagattcgcagatatattgaacctgcttggtagagccaaatcaatcaaaacagtttcaacttcacctaaaatgggtacggagttggatggaacgtctttcacaaaatgaactagatatacgaagcttggtttaaactatgagatttgctccggtcagtaaaaagtatctcgaggtactagtatctcacggtactaaatcgtttccgatcatttgatctagttggacatgatggccattgctagatccaacgattgaaaacgatttgataccgtgaggtaccagtacttcgagatattttttttttggactgaagcaaatctcttaaactattctacaactccacttcatagttcagactcaactcctgaagctaaatttaggatttgagttttaccaaacagttccatattttagcacgctacaaacgaattgggggagcctgagcctgaaatgccatttgcctgattgccttacctctgaactgtgcactgacattcattgcatcattgaatgtcgatcaggggtaggagcagcatggaggttggccaaagtgcaacccggttcgtcggtggttgtcttcgggctgggatccgtcggattggcggtaagctagaggtgaagcagtgtaatttcttactcggatacatgatgagttgacgaccgctgcaaatattttgacttttttttccaggtagtgcaaggggcaaaaatgtgtggagcaacgaagattatcggtgttgatttgaatcctaacaaagaggaagttggcaagtccaaattatttttcctgtgtataacacgcagtgaagaagaatctttgcattttctcacaactgaagaaacctctactttttgcaggaaaagagttcggtgtgactgatttcgtcaatccatcccaactcggcgacaaatccgtcagtgaggtgaggaaacacgccatttggcaccaccctacagaaatcatctgctaatggatccaaactcgtcagtgcacgttgttaattctgttctatcctaggtgatcaatgcgatgacagacggtggcgctgactacagcttcgagtgcatcggtatctcgtcggtgatgactgaggcagtcagaagcaccaaatcagttctgatctcaccacactgattcagacattcagtgatctaataatcgcgtgttaataattcagaggagaatatttgcagcgggaattaataatcgtgtgttaatgcagggacggggcaagacgatcattctgggggtcgagaaggacagccagccgttgtgcctgccgtccttcgagtttctgttcggcaagtgcgtcatgggatcgctcttcggtggggccaaacccaaaactgacatcccaatcctcgccgagaaatgcatgaacaaggttgcgtttttataaattcagttcgcggtttcagtttcagacgaaactagactcttcctaattgtaatgcatgtgctttgtgtgtgttgtgcaaatgcaaatgcaggagctggaactggagaagctggtcactcatgaggtaggcctgacggagataaacacagccttcgatttgcttctgcagggaaagagcctgagatgcatcatatggatggacaagtgatggccacaacttggggtggggatgcttttcctgttcaggttctgaatttggttgattgatgtgttcaataagtatgctgtttatttcgctggtgttgctgaaacaaggagtaatacactaatacgtccatcagccatcacgaataactgatgtacacttaatttcatgggcggttagcagcatcctcctttctgaatcaatgcagaatattttcattccaaaagaaaaggattatctttcttatggagtatgttcagatttgcgtgtaaagaactggattagtccaatcttgtttcttcttttttttttgatctcagtccaatcttgtttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0189600, RefSeq:Os03g0189600