Os03g0190300

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Revision as of 12:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0190300| Description = Conserved hypothetical protein| Version = NM_001055762.2 GI:297600458 GeneID:4331899| Length = 3456 bp| Definition ...")
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Gene Name

Os03g0190300

Description

Conserved hypothetical protein

Version

NM_001055762.2 GI:297600458 GeneID:4331899

Length

3456 bp

Definition

Oryza sativa Japonica Group Os03g0190300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4680376..4683831

Sequence Coding Region

4682078..4683241

Expression

GEO Profiles:Os03g0190300

Genome Context

<gbrowseImage1> name=NC_008396:4680376..4683831 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:4680376..4683831 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggggacggacaccgtcgacatcgtgaaaggcggtggtgacattgtcctggcatgtgacacaaaggttgtcgctttcaacgccgctgagttggcttgtgaaggccgcgacaaggacgatgacatggtctcggtgaagagggacacatctgacgtcgacctcgtcgccggcggcgacgcagactcttccggctacaatagcgacgccgccgacaaggatgctagcagcgccgccgcagcaccggacgctagcgagcccggggttggcctcatggtgccggccatggcatcgaggctggaacgctcgtgctccaacatcgagacggcgaggcgtggctcgaaagcgttcgaacttccggcgaagtcgctctcctacggcgacctcatggccttgcctgccggtggctcagccacagccaccccagtcggcgcgcccgacgacagcccagccgcgtccgtgaagacgacgtgcagcgccgaccacgtcatgctgaagaagtgttcgtccagccaggtgctcccgtcccggagccggaagctgtggtggaggctgctcctgcgaagccaccggaacctgcaccggccggcggcgaccgtaccagcagcggtgccgtcggcggagcagcggcacgacgggtacgcgtccgacacgctcgacgcgggcgccgccacggccgacgtcaagaacaaggggatcgccgtaggccacgagcccatcccgaaccaatggatggcgttctcgtcggaggccacgtcgctggaccgggtcagcgcgtgggtgaacagcctcgtggacaacccgttcaaagccaacgaggaatgcatcgtggagcacgacgacgatgacgacgacacggctcgcccgcattgcacggagatcggggagccctcgtcgttcggcggcaagttccccgcccaagcgcggcggcgcatggccggcgaggccatcaaggcgaacagcatcatacaaacgctcaccacgtcctcgtccgtggcgcacatatcggggatggggctcactgtcatcccggtgatctcgccgttctccagcctccgggcagtcaatctgtccggcaacctcatcggtaaattatcacgttcttttctcgttaagatacatattttatatcgattttcgttagcatacttttcaaactactaa</cdnaseq>

Protein Sequence

<aaseq>MEGTDTVDIVKGGGDIVLACDTKVVAFNAAELACEGRDKDDDMV SVKRDTSDVDLVAGGDADSSGYNSDAADKDASSAAAAPDASEPGVGLMVPAMASRLER SCSNIETARRGSKAFELPAKSLSYGDLMALPAGGSATATPVGAPDDSPAASVKTTCSA DHVMLKKCSSSQVLPSRSRKLWWRLLLRSHRNLHRPAATVPAAVPSAEQRHDGYASDT LDAGAATADVKNKGIAVGHEPIPNQWMAFSSEATSLDRVSAWVNSLVDNPFKANEECI VEHDDDDDDTARPHCTEIGEPSSFGGKFPAQARRRMAGEAIKANSIIQTLTTSSSVAH ISGMGLTVIPVISPFSSLRAVNLSGNLIGKLSRSFLVKIHILYRFSLAYFSNY</aaseq>

Gene Sequence

<dnaseqindica>591..1754#gagggctgtgattctcgcgtccgctgcctatttctgcctccgccacgcccacgcccacgcccacgcccacgcgagcgcgtttgcactttcccccgtgttttgtgcacagtacactacccagcctgccgctcgatcgatctggccttctccgccgcaccgccgcgcggcgccccgaccgtcgtgcggccgcaggaggatgcaggcacccttcctttcgccgcttttctcctctggaagaagggctctcccatagacaacggctaagaattacaaggctgcttctttcgggagtagtttttctgttaattttacaagggaaataggtgagatttctgaggtgtaaaaagagaattagtagtgctgtggctggggaagatgaccaagatcagctgcttctctgctcttctcgccggcaagaggaagttatcaaaggttggtggattatattcttaggagacccagttctttgatgaattttggtttaagtttttgtttcttatcagctctgaacatggcaggttacgagcaagattggttacggcaagaagtctggtggcaatgagttccagaaggtgaaaccggtggagttcatggaggggacggacaccgtcgacatcgtgaaaggcggtggtgacattgtcctggcatgtgacacaaaggttgtcgctttcaacgccgctgagttggcttgtgaaggccgcgacaaggacgatgacatggtctcggtgaagagggacacatctgacgtcgacctcgtcgccggcggcgacgcagactcttccggctacaatagcgacgccgccgacaaggatgctagcagcgccgccgcagcaccggacgctagcgagcccggggttggcctcatggtgccggccatggcatcgaggctggaacgctcgtgctccaacatcgagacggcgaggcgtggctcgaaagcgttcgaacttccggcgaagtcgctctcctacggcgacctcatggccttgcctgccggtggctcagccacagccaccccagtcggcgcgcccgacgacagcccagccgcgtccgtgaagacgacgtgcagcgccgaccacgtcatgctgaagaagtgttcgtccagccaggtgctcccgtcccggagccggaagctgtggtggaggctgctcctgcgaagccaccggaacctgcaccggccggcggcgaccgtaccagcagcggtgccgtcggcggagcagcggcacgacgggtacgcgtccgacacgctcgacgcgggcgccgccacggccgacgtcaagaacaaggggatcgccgtaggccacgagcccatcccgaaccaatggatggcgttctcgtcggaggccacgtcgctggaccgggtcagcgcgtgggtgaacagcctcgtggacaacccgttcaaagccaacgaggaatgcatcgtggagcacgacgacgatgacgacgacacggctcgcccgcattgcacggagatcggggagccctcgtcgttcggcggcaagttccccgcccaagcgcggcggcgcatggccggcgaggccatcaaggcgaacagcatcatacaaacgctcaccacgtcctcgtccgtggcgcacatatcggggatggggctcactgtcatcccggtgatctcgccgttctccagcctccgggcagtcaatctgtccggcaacctcatcggtaaattatcacgttcttttctcgttaagatacatattttatatcgattttcgttagcatacttttcaaactactaaacggtacaatccgttcgaaaattttttatgtagaagttgctttaaaatatcaaatatattcatttatcaagtttataataattaaaacttaattaattatgtgctaattttttttttcattttacgtgcggcaatttaatcttcatgtttctcgttcttggctgatcaatccattcgttctgcagttcaaatatcatctggatcattgcctaagggattgcactcactcgatctgtcgaggaacaagatatctgtcatcgaggggctgcgcgaactgacgaggttgcgcgtgctcaacctcagctacaacaagatttcacggattggtcacggtaagcatttcgtcagatatcacagctgtttctttcagtaagtttattgctactggtgaaagccaggctttgcgtggatcttgttcattgtgcaatgctcgtgtgcacttctggatcggtggcagtcgatagacattgggccgggctaagtactaggatggtccatggtacagactttagtagtgcacagtaacgatgcgtcatgtcatgctctgaaactaatgctggcacacacactgtgacactgaagggatcgatacaaggttcatgtgcttcaccttatttaccggcgactccagattgataagcagaaacgagtacatacacagggcgccgcatgctgacacccatcagatatccaatctaggcatatcacattcttacctttcggatagtacaattcgtacattctgatagacgatactcgtgaccgtgtaccatgctcctttcggccaacttcttcagaaccttgggaatcgagtggatgtcccgcaggtttgctcgtccctagaaaagaaaagaaaccgctgtgcgcgagcgtgactggatgccacatcggtccgctctggtccatcctacgcactgcttagcttgtttccatgcaccatgcgagctagtatcacatgagacatgacagtgtaccctgcagttaattatactattcgtgtgaattgaatcaaaagaagtgaacaatttgtggtttcgattcgttcagggctgtcgaactgtggggcgatcagggagctgtacctcgccgggaacaagatcagcgacgtggaggggctgcaccggctgctgaagctggcggtggtggacctgagcttcaacaagatcaccacgacgaaggcgctggggcagctcgtcgccaactacagctcgctgagggctctcaacctcgtcggcaacccggtgcagacaaacatcggcgacgacgcgctccgcaagtcggcgtcgggcctcctgtcgcggctcgagtacctgaacaagcagcccgtgaggccgcagcgcgcgcgggaggcggccaaggacagcgtcgccaaggcggcgctcgggaacggagggtggagctcgcgcaggcggccgacgccgtcgtcgcggcggctgagccagagccccggctcgtcggtgaagaaccgggggagggataatgggagcggcagccataggggcagcaggagcaggtccaagagcaggcctcaccagggcttcagccttgcaaggaagtgaagcaatttgctaggcaattaggcatatgatgctctactgaattggaggaaaatttcaaatgtgatgtgcttaatctttgaaactgccatgcgccatgctgtaggatcaaataatgcacaatcatcctcgtttatttggtgcgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0190300, RefSeq:Os03g0190300