Os03g0191700

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Revision as of 12:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0191700| Description = Armadillo-like helical domain containing protein| Version = NM_001055769.1 GI:115451266 GeneID:4331909| Length = 450...")
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Gene Name

Os03g0191700

Description

Armadillo-like helical domain containing protein

Version

NM_001055769.1 GI:115451266 GeneID:4331909

Length

4507 bp

Definition

Oryza sativa Japonica Group Os03g0191700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4746904..4751410

Sequence Coding Region

4747306..4747410,4747482..4747740,4748602..4748765,4749377..4749539,4749730..4751165

Expression

GEO Profiles:Os03g0191700

Genome Context

<gbrowseImage1> name=NC_008396:4746904..4751410 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:4746904..4751410 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgtgtgcgaaggtggtggcggcggcggcggcggaggagagggagatggagttgctgctcagcgagatccctcaggtcaccgcgccgcatgggcagcgcggtggccgtggcggcggcggcggtggtggtggtggtgctgcccagtgctacggcttgcatggacctacgcgttaccatgcgcacgcgggggcgcccgcgcgctacggcggggatccgtgcttccccctggtcttgaaccgtcgcgacgatggtggtggccagcagggcggcgctcgcggcgccatccacgtgccgctatcggggggcttcgcgtcgtcgccggcgtcgagcacgtccgccggtagcgcgccgtcgccggggtcggaccggttcgtcggccgctcgccgtcgccgatggtgcaggcgacgaccgacgaggacacggagaggctggcgagccagctcgacggcttgcttgtcggggacgcgcccgccgcggacgcgctcgccgcagcgctcatgccgccgcagggctcgccggcgtccgccgccaagaacgtgtacctgccagatgtctccgcggtgcacggtgcgtataacaatggctacaactttggggagccgggttactcgcttcaccatgagcccggcgtattagctgatcaggccatggcgtccggttatgtcgccccatctcagtgctttccagtggacgtcggcttggatggctacggcggcttccctccaagcttgggtaccagtgttggcagcttcatgtacactaggactaggaacagctccggcattggttgggaacaagggctagtgcaccctgatcatgctcgaccggtcttgcttcctggacagtctggtgcagaacacaactgggggtacgctggtacgggtcagatttccctggactcccgtggcagaagtttgccaaaatcgccctacgaatacagtgttgcagcagcgagagacattgggtacatgaaaggtggtttcaatcaaatggagccattttgtgatgggaggaagaatgtgccttttctgaaccgtgcaaaggagaggagatttcagcagcatgtcaacaataggtcagttgagctggggagtcctggtatgctgatgtatgagaacatagttgagctggagagtcctaggatgctgaggtatgagaacatggttggagccaagggctatatctacttcatggccaaggaccagaatgggtgccggttcttgcaacaaaagtttgaggaagggaaagatcaagccgatctgatatttgaaggtatcatcgaccacattcctgaacttatggccaactcgtttgcaaattatcttgtacagaaactactagatgtgtgtgatgaggagcagaggctgagaattattgctgtactgactgaggaccctgtgaagctgctgagagtctctctaaactcgcacgggacaaggtcgatacagaaattgattgagactgttaaaaccaggaagcagatcatgctcattatttcggctctacaaccaggctttattcatcttgtcaatgatcctaatggtaatcatgttatacaaaaatgcctgaaaaattttgatgcagaagagaacaagttcatatttgaagctgctgcaacccattgtgttgaaatggctataaatcgccatggctgctgtgtgttacaaagttgcatatcaaatgcatatggtgaatatcaaatcaagttaattatgcaaatatgtgctgatggcttatatcttgctcaagatcaatttgggaattatgtgatccaatatgtcctggatctgaaaattccttttgcaaatgcacagctggcatctctgtttcaaggaaattatgtgtatctttcgaagcaaaaggtgggcagcaatgtggtggagaaatgcttgaaggttttcccagatgatgacaaagctgccataatatgggaattaatctcagcctcccattttgagcaactgctgcaagacccttacgcaaactatgtcattcatacggctcttgtgcagaccaggggccatctccgcagcgctcttgttaacgcaatcctcccccatgaggaagctattcggaccaatccctgttgtaagagaatctctaaagtcctctctaggaggtaa</cdnaseq>

Protein Sequence

<aaseq>MMCAKVVAAAAAEEREMELLLSEIPQVTAPHGQRGGRGGGGGGG GGAAQCYGLHGPTRYHAHAGAPARYGGDPCFPLVLNRRDDGGGQQGGARGAIHVPLSG GFASSPASSTSAGSAPSPGSDRFVGRSPSPMVQATTDEDTERLASQLDGLLVGDAPAA DALAAALMPPQGSPASAAKNVYLPDVSAVHGAYNNGYNFGEPGYSLHHEPGVLADQAM ASGYVAPSQCFPVDVGLDGYGGFPPSLGTSVGSFMYTRTRNSSGIGWEQGLVHPDHAR PVLLPGQSGAEHNWGYAGTGQISLDSRGRSLPKSPYEYSVAAARDIGYMKGGFNQMEP FCDGRKNVPFLNRAKERRFQQHVNNRSVELGSPGMLMYENIVELESPRMLRYENMVGA KGYIYFMAKDQNGCRFLQQKFEEGKDQADLIFEGIIDHIPELMANSFANYLVQKLLDV CDEEQRLRIIAVLTEDPVKLLRVSLNSHGTRSIQKLIETVKTRKQIMLIISALQPGFI HLVNDPNGNHVIQKCLKNFDAEENKFIFEAAATHCVEMAINRHGCCVLQSCISNAYGE YQIKLIMQICADGLYLAQDQFGNYVIQYVLDLKIPFANAQLASLFQGNYVYLSKQKVG SNVVEKCLKVFPDDDKAAIIWELISASHFEQLLQDPYANYVIHTALVQTRGHLRSALV NAILPHEEAIRTNPCCKRISKVLSRR</aaseq>

Gene Sequence

<dnaseqindica>4001..4105#3671..3929#2646..2809#1872..2034#246..1681#gcatctccccttttgcatgcctcaccggcctctccacctccccctcctcctccgcctcccaatgctctagctgcttgctcccgattgatttgatttccccccttctccgagtctacgcgatctgcggattggccgtctccccactcttgattcagtccagggagttttgatctgaccggattttgcggtggggttttcttttttgggttgggttgatcttttgggtggtttgatctgtggtggcgatgatgtgtgcgaaggtggtggcggcggcggcggcggaggagagggagatggagttgctgctcagcgagatccctcaggtcaccgcgccgcatgggcagcgcggtggccgtggcggcggcggcggtggtggtggtggtgctgcccagtgctacggcttgcatggacctacgcgttaccatgcgcacgcgggggcgcccgcgcgctacggcggggatccgtgcttccccctggtcttgaaccgtcgcgacgatggtggtggccagcagggcggcgctcgcggcgccatccacgtgccgctatcggggggcttcgcgtcgtcgccggcgtcgagcacgtccgccggtagcgcgccgtcgccggggtcggaccggttcgtcggccgctcgccgtcgccgatggtgcaggcgacgaccgacgaggacacggagaggctggcgagccagctcgacggcttgcttgtcggggacgcgcccgccgcggacgcgctcgccgcagcgctcatgccgccgcagggctcgccggcgtccgccgccaagaacgtgtacctgccagatgtctccgcggtgcacggtgcgtataacaatggctacaactttggggagccgggttactcgcttcaccatgagcccggcgtattagctgatcaggccatggcgtccggttatgtcgccccatctcagtgctttccagtggacgtcggcttggatggctacggcggcttccctccaagcttgggtaccagtgttggcagcttcatgtacactaggactaggaacagctccggcattggttgggaacaagggctagtgcaccctgatcatgctcgaccggtcttgcttcctggacagtctggtgcagaacacaactgggggtacgctggtacgggtcagatttccctggactcccgtggcagaagtttgccaaaatcgccctacgaatacagtgttgcagcagcgagagacattgggtacatgaaaggtggtttcaatcaaatggagccattttgtgatgggaggaagaatgtgccttttctgaaccgtgcaaaggagaggagatttcagcagcatgtcaacaataggtcagttgagctggggagtcctggtatgctgatgtatgagaacatagttgagctggagagtcctaggatgctgaggtatgagaacatggttggagccaagggctatatctacttcatggccaaggaccagaatgggtgccggttcttgcaacaaaagtttgaggaagggaaagatcaagccgatctgatatttgaaggtatcatcgaccacattcctgaacttatggccaactcgtttgcaaattatcttgtacagaaactactagatgtgtgtgatgaggagcagaggctgagaattattgctgtactgactgaggaccctgtgaagctgctgagagtctctctaaactcgcacgggtaatgatcttttgttaaaaactgatatgtacttcaatatgatctgccattattaacttactaaaagaaagcgccgattgttgattggagaatgttgtaactttaggcaggaccaagtgtactttgatgctaacattgtaatagctactggacacaatgaatggtgatgatttcttttcatttatttcaggacaaggtcgatacagaaattgattgagactgttaaaaccaggaagcagatcatgctcattatttcggctctacaaccaggctttattcatcttgtcaatgatcctaatggtaatcatgttatacaaaaatgcctgaaaaattttgatgcagaagagaacaaggtactttggcaaatatctagtttgcaaactgatttttgttaactcttcttgactactacttgttatgccattgatttgagaattatctgttgtagttttgacagttgcacaccataagttagagcaacattctaaacacatggaatttattggctgtgtcctatcccatacaattttctcagtctgcatacaattttctcaatctggagcaaaacatttctgaaactgtagctatacctagcatcatgttctgaaacttgcatcgatactctatcagattgaagtaaagtaatttggtgttgtagatgtcactatatctttctataaacttggtcaacttaaagaagtttgacttagaaaaattataggaacaaacatattcatactgtttacatagaaacttgctcatggagcaaatacaatctcttaacaattgataaatatctcaatgtcttctgttagagaacagatattgtgttataaagttcactagttcagttccatagttgttggctcttgttgaaaattcagagaagtcactattctgtgtggaatttatgaaattcttctgcaaaaaaatatgtgtgaagatctttactctcttttaacagttcatatttgaagctgctgcaacccattgtgttgaaatggctataaatcgccatggctgctgtgtgttacaaagttgcatatcaaatgcatatggtgaatatcaaatcaagttaattatgcaaatatgtgctgatggcttatatcttgctcaagatcaatttgggtaaaccttttctcattgttaggcatcttataatgtactgctgagttgaaattactactttgtgcttgtttctaaaactgtatttgtctgtctagtactccctctggttcttaatatttgatgacctttaaatctttgatcttcaataatttctcaaatacttagtttaaaaacataacaattggtaagtgtaaacacattaatagattttataaatttgttctaatataaaataaatgatggaagttttaaaattttggccaaattttgttctctaacacctatgtactgagttagtcctacagtatgtatgtagcttcttgaaatgttcctacttcctcaacacttgtatatgaattagaacttcaaaatgtagattatccatataccatgtcagtgctttatttctttttaatgctgtagctcatttctcacattaaaaagctattttttctgtttgacaattatgtataacaattcaaaacttctgaacatcccaaaccactctgatagcagcttagccattcacacgtgttgttgaaaaattactcataactcatgtatatatgcatgttaaattctcagtgcttgacgtaatctgttgcatctcacaaacagatcatttatgacggtgctgacactcactacaagaattctctgaatgttttaacgtgtactctttgctgacttgagttgaaaacatctgcaaccaaatctatcttgtagtcattagtcaaggactccacataaaggatttttatttatgttcgtactttgagattagtttattgatatttttatgatgttcgctgacatgtaaatccacaaactaaaattctttcctgtttccccttattacaggaattatgtgatccaatatgtcctggatctgaaaattccttttgcaaatgcacagctggcatctctgtttcaaggaaattatgtgtatctttcgaagcaaaaggtgggcagcaatgtggtggagaaatgcttgaaggttttcccagatgatgacaaagctgccataatatgggaattaatctcagcctcccattttgagcaactgctgcaagacccttacgcaaactatgtcattcatacggctcttgtgcagaccagggtaagtactagttcttttgaatttgacagcgcattatgttcaacatcttctaatcttactgttcttgatagggccatctccgcagcgctcttgttaacgcaatcctcccccatgaggaagctattcggaccaatccctgttgtaagagaatctctaaagtcctctctaggaggtaagaaagagatgggatgtgtacaatctgtggtaccaagaaggttgcaagtgaatgcctagtgccctctccaggagatgagatgtgtacaatctgtggtacctagaaggctttgttgtttatttatgtgcactagctgttaaactataatgtatctgccatacaagcttcggagttcaggaggtggttttggttataggttataaccaggctgtagaatcgtcatgtagtttttgcagcacgccggcaacgctgtagcgttgtattttctttaaaatttctagttctttctgaactgcctgttctgtatcttctgtaatactctttttggttgtgctaaacggagtgaccattacatttcgtcaaagttgtcatacctgtgttatattacatagttgcatcttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0191700, RefSeq:Os03g0191700