Os03g0192500

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Revision as of 12:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0192500| Description = Protein phosphatase 2C-like domain containing protein| Version = NM_001055775.1 GI:115451278 GeneID:4331915| Length ...")
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Gene Name

Os03g0192500

Description

Protein phosphatase 2C-like domain containing protein

Version

NM_001055775.1 GI:115451278 GeneID:4331915

Length

4895 bp

Definition

Oryza sativa Japonica Group Os03g0192500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4793800..4798694

Sequence Coding Region

4794065..4794173,4794265..4795034,4795537..4795598,4795816..4795885,4796520..4796607
,4797607..4797776,4797865..4798008,4798110..4798238,4798346..4798513

Expression

GEO Profiles:Os03g0192500

Genome Context

<gbrowseImage1> name=NC_008396:4793800..4798694 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:4793800..4798694 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgaagaggcgcgcgccgccggatgctccccagcgccgccccgcgcgccggctgcttcctgtggcgctgccgccgagctctgcctctgctcccctacaggtgtggagggtatcgagcaggtgcctggatgtccgtgttttgaggacgccggcgctgtcgtggtgagtggagaggcgccggaaggaccgggggttttgtgctctgaggatggcgctgagctcaaattggctgagcagggtgccctggatgtgagattaggttctccggcagtcggaatccatgagcagcagctgttgcatcgtggtacttcaggttccgatgaagctggtgcaatcaatgagatttcacccgttgaggtgtcgccgtcagaggctagttcaaatttggatactgctggggctattggtggctcccctctcatgttggagtccctgccagagaccagtgatacccgaggatgtgaacaagaggttatgcccggtgttgttgtagggtcatctaatagggatgcaagttctgaggtcggtgtcgagtcggagcgtggctcggatgcggacggtcgaaatggccttggtgaaggggaattggtgtcgagcgttgatggaggcggcgccgagaagagctcaaaggtgactggcgtcttgtctgaagaaggtgtggacgggatggaaacagccctggagccgtgtgtggcgtctgttggctccatcacgcaggttgaggaaggtgtggacaggatggagacgagtttggatgactctgaggcttcagacggctcaaccacgcaggattttgatactgacgtggagacggagtcgagcggttcaagtatagaagaacaagacatgggatacggagtgcacatcccacacacggaacaagcgatctgtgaagtggccaggggaaacaagagttcagaggtgaagagctctgacaggatgtcttcagtaaccctaccaacacttatattggcttcaggtgcagcaatgctacctcatccttcaaaggtgctgacaggtggtgaagatgcttattttatagcttgtgacggttggtttggtgtagcagatggagtaggtcaatggtcatttgaaggaatcaatgcagggctgtatgccagagaattaatggatggttgtaagaaagctgttatggagagtcaaggagctccagagatgagaactgaggaagttcttgctaaggctgcagatgaagcacgatcccctggttcttccactgttttggttgctcactttgatggtcaagtacttcatgcatgtaatataggtgattctggattcttggtgataagaaacggagaaatatatcaaaaatcaaagccaatgacttacggcttcaattttcccttgcaaattgagaagggggatgatcctttcaaacttgtacagaaatacacaattgatctacaagaaggagatgccattgtgacagcaacagatggcctttttgacaatgtctatgaggaagaaatagcagctgtcatctccaaatcattggaagccggcctcaagccttcggagattgcggagttcctggttgctagggcgaaggaagtgggcagatcggcaacctgtagaagccccttctctgacgcggctcttgcagttgggtatctgggttactctgggggcaagctggatgatgtaacagttgttgtatccgttgttcggaaatctgaagtttaa</cdnaseq>

Protein Sequence

<aaseq>MDEEARAAGCSPAPPRAPAASCGAAAELCLCSPTGVEGIEQVPG CPCFEDAGAVVVSGEAPEGPGVLCSEDGAELKLAEQGALDVRLGSPAVGIHEQQLLHR GTSGSDEAGAINEISPVEVSPSEASSNLDTAGAIGGSPLMLESLPETSDTRGCEQEVM PGVVVGSSNRDASSEVGVESERGSDADGRNGLGEGELVSSVDGGGAEKSSKVTGVLSE EGVDGMETALEPCVASVGSITQVEEGVDRMETSLDDSEASDGSTTQDFDTDVETESSG SSIEEQDMGYGVHIPHTEQAICEVARGNKSSEVKSSDRMSSVTLPTLILASGAAMLPH PSKVLTGGEDAYFIACDGWFGVADGVGQWSFEGINAGLYARELMDGCKKAVMESQGAP EMRTEEVLAKAADEARSPGSSTVLVAHFDGQVLHACNIGDSGFLVIRNGEIYQKSKPM TYGFNFPLQIEKGDDPFKLVQKYTIDLQEGDAIVTATDGLFDNVYEEEIAAVISKSLE AGLKPSEIAEFLVARAKEVGRSATCRSPFSDAALAVGYLGYSGGKLDDVTVVVSVVRK SEV</aaseq>

Gene Sequence

<dnaseqindica>266..374#466..1235#1738..1799#2017..2086#2721..2808#3808..3977#4066..4209#4311..4439#4547..4714#taaaaaaaaaaccgcgcggaaaacccccaccccaccgcgcaccgccagggcgagagaaaacgtcgccgccgccgagccgcggaagcccgcggcgctgccccccaacacctcaaaacctcccacacaagcctcctcccctcccccattaacctctcctcccgtcctcccccacctccatctcgcgatccctagctcgctcgctcgctctctcgctgggtgctgatccaaagccctcgatcccctcgactcaggctctagcttagccatggatgaagaggcgcgcgccgccggatgctccccagcgccgccccgcgcgccggctgcttcctgtggcgctgccgccgagctctgcctctgctcccctacaggtgtgggtaaggggcattcatgcttgcttaatctccttcggttttggttctcgatttgatttggtgttggtttggtttggtgttggtttggatgcagagggtatcgagcaggtgcctggatgtccgtgttttgaggacgccggcgctgtcgtggtgagtggagaggcgccggaaggaccgggggttttgtgctctgaggatggcgctgagctcaaattggctgagcagggtgccctggatgtgagattaggttctccggcagtcggaatccatgagcagcagctgttgcatcgtggtacttcaggttccgatgaagctggtgcaatcaatgagatttcacccgttgaggtgtcgccgtcagaggctagttcaaatttggatactgctggggctattggtggctcccctctcatgttggagtccctgccagagaccagtgatacccgaggatgtgaacaagaggttatgcccggtgttgttgtagggtcatctaatagggatgcaagttctgaggtcggtgtcgagtcggagcgtggctcggatgcggacggtcgaaatggccttggtgaaggggaattggtgtcgagcgttgatggaggcggcgccgagaagagctcaaaggtgactggcgtcttgtctgaagaaggtgtggacgggatggaaacagccctggagccgtgtgtggcgtctgttggctccatcacgcaggttgaggaaggtgtggacaggatggagacgagtttggatgactctgaggcttcagacggctcaaccacgcaggattttgatactgacgtggagacggagtcgagcggttcaagtatagaagaacaagacatgggatacggagtgcacatcccacacacggtatttctttttctgcaaactcatgacctagatagttgtgaacgtggctatgcttaatatcagtaagttgatgctgtatgtttgtaactcaggtttgcagtttatatgaatcagtttagttttaatacaaagatacagcgtctgaaaattagatacctcatcctagtgagtcatttttttcttgcaattatatgcttttattgagtgctctacatttattttcacacttcatatcagtattcagtaccttgttagttatttggttatcctttcatgatacggtcatatatcactttttctgaaaggcgtgtttgttcaactaactcaagagactcagattttgtgtgatatcaatgcacaatttggaagtgaccctgttcatagaaatttataggccgcaggctgcagtaactttcggggagcttttgctgtcatatgaataagaatataccatggtaatgttattttcttctgctcagatgtttgttcttcccctttgtaggaacaagcgatctgtgaagtggccaggggaaacaagagttcagaggtgaagagctctgacaggtactacttagctctattgcttttagcattttagagtttaaggttttgactcagcttgatccttttgaatgaatataaagttattgaactgaagcctctggtgtaatttgtttgcttttaaagttggatgttccacatggttttatcattttccttttgaacctgcagagattcaaagagatcgcatattcattttttatgcttaattcttatgtaggatgtcttcagtaaccctaccaacacttatattggcttcaggtgcagcaatgctacctcatccttcaaaggtattatggtttttctctgacccttgtctgtaaaatatatttactatgtccttcaaataaaaaatgcacttcagaatgatggtaccactatcttgatttttcacttgaatgggtttgtgtattttttgtatagagatgaaataagctttactttcatgctgataaagttcattccactccacgctatttccaaatattttacaagaataataaacactattatctcgcttctggtttatttcttgctcctttcccagtctatatgtgatctatagttttcatattccttaaaccttagaagtaaagatagaaacatcaacataagcttttgaagcaaacacacaattatagcgttctatctgcttgtccgaaacccctttacgtgaaagtacaaaggtatagcctctatccaaacaagtgttgaaactaatataattcatcaacatttagcccaagtatcccatgtattttgatcggttgaattctttgtgcaactttttgatatctggttttatacctgaagtaaccgtccacgtgtatttgatttgttgaatatgttaagttgtattaccatcgagataacctcgcatttttcttcagtcattttgacaatgttatctgcataatattccaggtgctgacaggtggtgaagatgcttattttatagcttgtgacggttggtttggtgtagcagatggagtaggtcaatggtcatttgaaggtaaaccaattcttctttctcaactactatttgttgtgtaacctcgtcgttgcagatgtgttgaactcctgagtttttttggtgaccaatactaatggcataattaatctccatgggatgcagaatatttgtacaccaaattaacttagaaattgggaaattttgtgattaggttcatagtggcataactataaaggacgtgcctattttcgattactactgtaaggctccaaaattcagacaagttataagaattccaggtaaagtgggaagcgagatcacatttaatagagactgacagtgactatcaacctaaaaaatgatggctgcattccttttgtttttttttcttttctgatgtttaaggcaaagacaaatgataaatagaactactatagttttcaatatcgcactctacatcatttttattcatcattttattatggtatttgctttgttgtgatttttaaattgtcactctatctgttgctagctcaattgagtgtaaatgaacaacatcttaacatgtaaaaccaaacaaaattgtggaataataggtaatacacatggaaataggactaaatcatgttgctaaaatatgccatagtccagttattagtcccaaatgtcataaaacttaccctcgagcagaaaggggaataggaaaattatgtaggggagactgagaaactatggaatctaagtaaatgaggcactgaactgaatttcaggggggcacaaggcactgctaaagaatcattgtgtacagcaaaatattattttctgctctagtacagctcgtatatcacatagtatatagggtgctccagtctgtaagccagtttgttagtatgtactattggaggatttgaagagaattatggataatatttctatcttcacctaatttcacattaagtgtggattccatttctcaccattcttgctatcctttggaatatggccacttacatttgttgatttgacttccgtcctcaggaatcaatgcagggctgtatgccagagaattaatggatggttgtaagaaagctgttatggagagtcaaggagctccagagatgagaactgaggaagttcttgctaaggctgcagatgaagcacgatcccctggttcttccactgttttggttgctcactttgatggtcaagtatgttcgtagatgtcttggatgcccatttctcttttctttcactgttggcgaatggtgattaattgtgaactcattggtttcacaggtacttcatgcatgtaatataggtgattctggattcttggtgataagaaacggagaaatatatcaaaaatcaaagccaatgacttacggcttcaattttcccttgcaaattgagaagggggatgatcctttcaaacttgtacaggtgccacagcacttaccctgtcatccttgccctgctatcattggttcctcgtataaagttcatatgaacttaaaacttattttgtccctctttgctggcagaaatacacaattgatctacaagaaggagatgccattgtgacagcaacagatggcctttttgacaatgtctatgaggaagaaatagcagctgtcatctccaaatcattggaagccggcctcaagccttcggttagatcctaacacttttcttctgaaaatactagagaagactcacccatctcatatagaactgtccgtgaagtgtccttacatgatcattttgcataaaatcacaggagattgcggagttcctggttgctagggcgaaggaagtgggcagatcggcaacctgtagaagccccttctctgacgcggctcttgcagttgggtatctgggttactctgggggcaagctggatgatgtaacagttgttgtatccgttgttcggaaatctgaagtttaaactataagcctctttttggcttaagtgaatgcagctcctagattttgccagagctgcgtttgctggcgaatgtccatgagcattccatgtgaggtacccccaacctcacgtgtacatatgataagctgtatgttcctcgtggccatgatcgcagctactaagtaagttgcgattgcgcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0192500, RefSeq:Os03g0192500