Os03g0193400

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Revision as of 12:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0193400| Description = Similar to Polyamine oxidase precursor (EC 1.5.3.11)| Version = NM_001055782.2 GI:297600469 GeneID:4331922| Length =...")
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Gene Name

Os03g0193400

Description

Similar to Polyamine oxidase precursor (EC 1.5.3.11)

Version

NM_001055782.2 GI:297600469 GeneID:4331922

Length

2495 bp

Definition

Oryza sativa Japonica Group Os03g0193400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4904985..4907479

Sequence Coding Region

4904985..4905248,4905398..4905769,4906849..4907106,4907233..4907314,4907400..4907479

Expression

GEO Profiles:Os03g0193400

Genome Context

<gbrowseImage1> name=NC_008396:4904985..4907479 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:4904985..4907479 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacagtttgccaaatggcccgtcgtcgccggtagacatggtggtagactactacctgtatgactacgagtacgccgagccgccgcgcgtgaccagcctgcagaacgccgttccccagaggaccttcagcgacttcggagatgacgtctacttcgtcgccgacaaacggggctacgagtccgtcgtccactacctcgccggccagtacctcaacaccgacgactccggcaacgtcgccgacccccgcctgcagctcaacaaggtggtgcgagagatctcctactcctcgagcggagtcaccgtcaagacggaggacggctcagtgtaccaggcagactatcgtcatggtctctgccagcttgggagtcctgcagagcgatcttatacagttcaagccacagctgcctgtaagtttcgagttctctgtcctgcgcgcttctcccgaatagcatctgatcgatgtgttctgcatgtatttgatcagaaatggaagattcttgcaatctacgaattcgacatggctgtgtacaccaagatattcgtcaagttcccaaagagattctggcccgaaggggaagggagggagttcttcctctacgcgagcaccaggagaggttactatggaatatggcaggagttcgagaaacaatacccagattccaatgttcttcttgtcacggtcaccgacaaggagtcgaggcggatcgagcagcagtcggacaaccagaccaaggcagagatcatggaggtgctgaggaacatgttccctgaccaggacgtccctgacgccactgacatcctcgtcccaagatggtggtcaaacaggttctacaagggcaccttctccaactggcccattggcgtcaaccgctacgaatatgaccagctcagggccccgattgagagggtttacttcaccggtgagcacacaagcgagtactacaatggctatgtccatggaggttatcttgcaggtattgactctgcggaaattctgatcgactgcgcgcagaaccagatgtgcaagtatcacgttcagggcaagtacgactag</cdnaseq>

Protein Sequence

<aaseq>MDSLPNGPSSPVDMVVDYYLYDYEYAEPPRVTSLQNAVPQRTFS DFGDDVYFVADKRGYESVVHYLAGQYLNTDDSGNVADPRLQLNKVVREISYSSSGVTV KTEDGSVYQADYRHGLCQLGSPAERSYTVQATAACKFRVLCPARFSRIASDRCVLHVF DQKWKILAIYEFDMAVYTKIFVKFPKRFWPEGEGREFFLYASTRRGYYGIWQEFEKQY PDSNVLLVTVTDKESRRIEQQSDNQTKAEIMEVLRNMFPDQDVPDATDILVPRWWSNR FYKGTFSNWPIGVNRYEYDQLRAPIERVYFTGEHTSEYYNGYVHGGYLAGIDSAEILI DCAQNQMCKYHVQGKYD</aaseq>

Gene Sequence

<dnaseqindica>1..264#414..785#1865..2122#2249..2330#2416..2495#atggacagtttgccaaatggcccgtcgtcgccggtagacatggtggtagactactacctgtatgactacgagtacgccgagccgccgcgcgtgaccagcctgcagaacgccgttccccagaggaccttcagcgacttcggagatgacgtctacttcgtcgccgacaaacggggctacgagtccgtcgtccactacctcgccggccagtacctcaacaccgacgactccggcaacgtcgccgacccccgcctgcagctcaacaaggttgccacttctctgtaacccatacatatcactactgtcagaaaagaaaggaatgcatcatcgatccatggttaatcgtgcggttatagttactcgatcgtgagacacttgtaaatttacaagcacgtcatgggtggtgaattttataggtggtgcgagagatctcctactcctcgagcggagtcaccgtcaagacggaggacggctcagtgtaccaggcagactatcgtcatggtctctgccagcttgggagtcctgcagagcgatcttatacagttcaagccacagctgcctgtaagtttcgagttctctgtcctgcgcgcttctcccgaatagcatctgatcgatgtgttctgcatgtatttgatcagaaatggaagattcttgcaatctacgaattcgacatggctgtgtacaccaagatattcgtcaagttcccaaagagattctggcccgaaggggaagggagggagttcttcctctacgcgagcaccaggagaggttactatggaatatggcaggtacacaagtcagcgatacaaatagctgaatgcatatctcaaaaatttacaagagttacaccgtgtttagttccaaaatatttcttcaaacttccaacttttccatcacatcaaaactttcctatacacataagcttccaactttttcaccacatcgttccaatttcaaccaaacttccaatttactgtagcaaaaccactgaccatgaattgaaatacagttaacagaaccgaaacctttgtattcaatgatcaatgctccttctcggtcgcgcggggggaggggaaaaaaaatcagtcgctccccctctccccatcacgtgcacaccagcagcccctctggcccccaccacatgtcccctatccccacctgccactgatccacacacacaactccattgcaacaaatcacccacatattttgaaaaccctctattaatggaatttggtttattttttgttccaccaaaaatgtttcacctagtgtactcacaatgtttcactatgtatagatctaatgttgctgcagtgaactaaaatattccattgcaaaaaaaacccacatattttggaaactccctattaagggaattcgttttattttttgttctaccaaaaaaatgtttcagctagtgtacttataatgtttcactatgtatgaatcaaatgttgcagtgaactgaaacattttttcgctatttgctgaaacattgtttttatataaggtaaaacaacattcgatttaaacgagtgaaatattttcgatctacttagtgaaacaattccgatatactggtggaacatcgtgcaacatttaaaaataattcaataataagctaaaaaaaattcgtcggaatatatccatgtgtgctcttgttttgaagatttaattgcaacgaatttaatggtgcaatcagatcatgattttggataagtaatttaaaagaaaaatcagtttaaagtagttttgcacgtaaatcggacactgacgtcatactgacatcagcacccgatttttctccaaaccgatcggacatccgacccgtacactctccctaattttgcgtgtgtttattcaggagttcgagaaacaatacccagattccaatgttcttcttgtcacggtcaccgacaaggagtcgaggcggatcgagcagcagtcggacaaccagaccaaggcagagatcatggaggtgctgaggaacatgttccctgaccaggacgtccctgacgccactgacatcctcgtcccaagatggtggtcaaacaggttctacaagggcaccttctccaactggcccattggcgtcaaccgctacgaatatgaccagctcagggtactccacaaaaattgctaatcacatcataatgttaattgcaaatgtgattttatgattatagcaagtgcagttaaatttgagcttaatttggttctgaaattgtctgttttgtgtgtacataaggccccgattgagagggtttacttcaccggtgagcacacaagcgagtactacaatggctatgtccatggaggttatcttgcaggtatacatatctatgcctactcaagagcctgacaagatttctaatgctaaagttttgtgcttaattattcgcttttctgcgtcaggtattgactctgcggaaattctgatcgactgcgcgcagaaccagatgtgcaagtatcacgttcagggcaagtacgactag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0193400, RefSeq:Os03g0193400