Os03g0195100

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Revision as of 12:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0195100| Description = Similar to Plastid aminotransferase (Fragment)| Version = NM_001055790.1 GI:115451308 GeneID:4331930| Length = 4566 ...")
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Gene Name

Os03g0195100

Description

Similar to Plastid aminotransferase (Fragment)

Version

NM_001055790.1 GI:115451308 GeneID:4331930

Length

4566 bp

Definition

Oryza sativa Japonica Group Os03g0195100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4963808..4968373

Sequence Coding Region

4963808..4963830,4963955..4964013,4964123..4964193,4964307..4964423,4966893..4966955
,4967141..4967245,4967390..4967440,4967540..4968373

Expression

GEO Profiles:Os03g0195100

Genome Context

<gbrowseImage1> name=NC_008396:4963808..4968373 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:4963808..4968373 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctgtcaatatgatctccaagttacttgagaaggctgttcttccagcactggatgttgcacctcctgtaaaaataggagggcctcggcgtacgagcgtgctgcgcaatccaaacatggagaagcttcagaaggggtacttattcccagagattagcatcaaacgtgaggaacacctgaagaagtacccagatgcgaaggtgataagtttgggtatcggcgacacaactgaacccataccaagcatcgtaacatcagctatggctgagtatgctcttgcattgtcaactcctgaaggataccaaggttatggaccagaacaaggccacaagaatctgaggaaggaaattgctgacaaggtgtaccctgacatggggataaaagagagtgaagttttcatttcagacggagcacagtgtgacattgctcgtcttcagacgctgttcggtccaaacgtcaccattgccgtccaagatcccacatttccggggtacgtggacaatggcgtgatcatggggcagaccggcaaggcggacgacggcggcaggtacgccggcatcgagtacatgcggtgcgcgccggagaacgccttcttcccggacctgtcgcgggtgcggcggaccgacgtgatcttcttctgctcgcccaacaatccgacggggcacgcggcgtcgagggagcagctccggcagctggtggagctcgcgcggcggaacggctccatcatcgtcttcgactccgcctactcgtcctacatctcctcctcctcgtcgtcctccacgccgaggtccatctacgagatccccggcgcgagggaggtggcgatcgaggtgtcgtccttctccaagttcgccgggttcacgggcgtccggctggggtgggctgtggtgcccgacgagctgctctactccgacggggtccccgtggcgcgggacttcgaccgcgtggtgtgcacgtgcttcaacggcgcgtcgggcatcgcgcaggcgggcggggtggcgtgcctgtcgacggaggaaggccgcggcgcagtggcgcgggtggtcggggtgtacagggagaacgcgcgggtgctggtggagacgttcaggtcgctggggaaggaggtgcacggcggcggcgacgcgccgtacgtgtgggtgaggttcccggggcggcggtcgtgggacgtgttcgcggagatcctggagaagacgcacgtcatcaccgtgcctggcagcgggttcggccccggcggcgagggcttcatcagggtcagcgccttcaacagcagggacaaggtcctcgaagcgtgccaacgcctcaaaagcttcctcgcatga</cdnaseq>

Protein Sequence

<aaseq>MPVNMISKLLEKAVLPALDVAPPVKIGGPRRTSVLRNPNMEKLQ KGYLFPEISIKREEHLKKYPDAKVISLGIGDTTEPIPSIVTSAMAEYALALSTPEGYQ GYGPEQGHKNLRKEIADKVYPDMGIKESEVFISDGAQCDIARLQTLFGPNVTIAVQDP TFPGYVDNGVIMGQTGKADDGGRYAGIEYMRCAPENAFFPDLSRVRRTDVIFFCSPNN PTGHAASREQLRQLVELARRNGSIIVFDSAYSSYISSSSSSSTPRSIYEIPGAREVAI EVSSFSKFAGFTGVRLGWAVVPDELLYSDGVPVARDFDRVVCTCFNGASGIAQAGGVA CLSTEEGRGAVARVVGVYRENARVLVETFRSLGKEVHGGGDAPYVWVRFPGRRSWDVF AEILEKTHVITVPGSGFGPGGEGFIRVSAFNSRDKVLEACQRLKSFLA</aaseq>

Gene Sequence

<dnaseqindica>1..23#148..206#316..386#500..616#3086..3148#3334..3438#3583..3633#3733..4566#atgcctgtcaatatgatctccaagtacggcatacatgttgcatatatttgatcgatgcatatgaacagtagcagtatatagcctgtagtgatttcaagtcatttcagttagtctttccctgaatttgtttgattcctgcatctgtaggttacttgagaaggctgttcttccagcactggatgttgcacctcctgtaaaaataggaggtagatttatcatactatggttcttcttaatttgttgtttgtagcattcttgccatctcatggcacgtttaacttacttttgcatgcgtgttactactacaaaattcagggcctcggcgtacgagcgtgctgcgcaatccaaacatggagaagcttcagaaggggtacttattcccagaggtacagaattaatcacgatttcaccaaccttagtttgagcatatgattctccagacacttgatgataaattgataatatacgttaatttgtgctcctcgttttgatggtttagattagcatcaaacgtgaggaacacctgaagaagtacccagatgcgaaggtgataagtttgggtatcggcgacacaactgaacccataccaagcatcgtaacatcagctatggctgaggtatttatttactctacttctgtagttctgttttctctcttgcattggagcatgcatgcatgtttttccttttctgaaaaaggagaagcatgtgtaaaaatgtttaaccaaggaaagctacatgaggaatctcaagcaacaaatagctggtcatctggttcttaatggcgtagctagctagatggcactgtggtctatggaccacctaaaaatttgatcaagattaaaactataatatatgtgctagttattaatataataaaaattgtatagtggaccacccatttaattggcctattacatatagatggatcacctttactttaaatcctagctacgccactcttggttcttgtcatagcacgaattaagaatttaacatttggacacatggttgttctatgttttcccgtggatcatctttactctaaatactagctacgtcattattggttcttgtcatagcacgaattaagaatttgacatttggacacatggttgttctatgttttcccgtccatcaacattaaccttttgttgttgttgttcaccaatgcaaagattctctacaatcgatctgctagctgcaacagcattttgttaaactgagcacgaatactaaagcaaagcataccattttgtggacctctgcttagtacacctttcttttaataagtacaccttattaatataataattattgttttaaacaagagtgaagtccactcttggattatgaatcgtttttaaaatatttatcttttaaatatggtgactacatgtacagattagtcttaaaaaatattttaataaaataatatatttgttaacacttttatacaaattataatgaaaaataatggtcaaaattattttttcagagaccgtgctcttatccaaactgacaagtattatcaacccgtatggagtatacaaatgtagcaaaatggttatacgtagtggggcgaactagggttaaaaaccagcctaatattaactactttgtttaatattatatttttttgtcttaaaataaatgtgcaccgatgagatgggtgcaaatttgcattaacctaaaattaagtgaataaaataaattacttggcccaaccaatattcagtctgttagccttcattttgatttatttttatgacgctacatgcttgctccaccttttatatgagccaacgtactggtctgaaaattcttaagctttttacaaaagagaagcactcaagcaagggctcacttgcgaagaactgcacaagaggtttcgtcctaaatatagaagaggattacgttgtaatatctccgtcccataaaaattgtatttctagctccaaggctttgtcccacaaaaattgtatttctagccatgtggggcccaaccaattgattcatctatataagtttccttccatcccacataatttgggctgctaatgcttgtaattttattaagtatgctaattatatgggttaattctctcaaacttccttttaatcatttgtatatatggaatatgtgcatgcagtgggttcattaaataaggttattgtggtcatttttcaatcctactattttgtcctaaattagctagaaatgcaatttttataggacggaggtagtactaaactactactaatatatattttttttcaaggaagtgtcaagattcttcttctccatcacttggaaatttagctgtacctgtccttttgacttgtcacactcttatctcatgccaaatttgttcactttttctaccaaaaaaacacaaactttgcactctctatcaacccctttttctcttgtcagaaccaagataccctgatgtcactgcagagacatcacctcatccacatcatgcatgccttccagttctccctcttttcctcatatactgccataatctcctgcaattttagtgcaagtgccaaactgctaatgggaagatgacaaggagattaggagaagagcactatcatatctaattattccatgatctgtactacgtccactgcatgtgcatggctgctgctgatttaactaaatatgtagtgagctagctttggagaaagatttgttgtagactagtatcgcatttgtggattgacttgcaattggtggtcaattaatcctaatatacaacctaagtgctttcagatcactggctgtgacaccggcggttttctgctcgtgatgctgttgacatgacaaaatggaaaatacaatccgatgattgcgactaaggaaaattttaagcttacttgacttagggtgggcctatagggtattggtttattcctggagttaaccaatcctagcccaaaagaatttatcagaagaaagcctaaaaagttcagatttttttcagatacaatttacttgaatatatttttctcttaaataggatgttccatttccattttgtagagtaagaaacattttatcctattttttgcagtatgctcttgcattgtcaactcctgaaggataccaaggttatggaccagaacaaggccacaaggtaatacaaaacactgaaaacccccaactctgaagaaatctaggtagaacatggtttatcatccttgttttgaagaacaggttttcatcctgtttgcaaagaaaatactacagagatttcaaagagatataactatgacatttcactaacacaagatatatatgctctttgaaatgcatgtgcagaatctgaggaaggaaattgctgacaaggtgtaccctgacatggggataaaagagagtgaagttttcatttcagacggagcacagtgtgacattgctcgtcttcaggtattgcaagttatttcgcgtgctttcctacttaccaactgatcaaattcacttaatattctgagatgtgaaatgatacaaatctcatctttcatcttccttatctaaaaaaaaaaatctcaccattctttctcctggattcagacgctgttcggtccaaacgtcaccattgccgtccaagatcccacatttccggtataataacaaacctatccattaattacctgtgtctaattgcgaataaataaataaagtagtaggattatatgcgtaataagtaaaccattcgtgcaggggtacgtggacaatggcgtgatcatggggcagaccggcaaggcggacgacggcggcaggtacgccggcatcgagtacatgcggtgcgcgccggagaacgccttcttcccggacctgtcgcgggtgcggcggaccgacgtgatcttcttctgctcgcccaacaatccgacggggcacgcggcgtcgagggagcagctccggcagctggtggagctcgcgcggcggaacggctccatcatcgtcttcgactccgcctactcgtcctacatctcctcctcctcgtcgtcctccacgccgaggtccatctacgagatccccggcgcgagggaggtggcgatcgaggtgtcgtccttctccaagttcgccgggttcacgggcgtccggctggggtgggctgtggtgcccgacgagctgctctactccgacggggtccccgtggcgcgggacttcgaccgcgtggtgtgcacgtgcttcaacggcgcgtcgggcatcgcgcaggcgggcggggtggcgtgcctgtcgacggaggaaggccgcggcgcagtggcgcgggtggtcggggtgtacagggagaacgcgcgggtgctggtggagacgttcaggtcgctggggaaggaggtgcacggcggcggcgacgcgccgtacgtgtgggtgaggttcccggggcggcggtcgtgggacgtgttcgcggagatcctggagaagacgcacgtcatcaccgtgcctggcagcgggttcggccccggcggcgagggcttcatcagggtcagcgccttcaacagcagggacaaggtcctcgaagcgtgccaacgcctcaaaagcttcctcgcatga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0195100, RefSeq:Os03g0195100