Os03g0195300

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Revision as of 12:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0195300| Description = Similar to Low affinity sulphate transporter 3| Version = NM_001055792.1 GI:115451312 GeneID:4331932| Length = 4582 ...")
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Gene Name

Os03g0195300

Description

Similar to Low affinity sulphate transporter 3

Version

NM_001055792.1 GI:115451312 GeneID:4331932

Length

4582 bp

Definition

Oryza sativa Japonica Group Os03g0195300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4973696..4978277

Sequence Coding Region

4974061..4974216,4974349..4974425,4974509..4974570,4974663..4974856,4974991..4975277
,4975358..4975484,4976054..4976284,4976388..4976453,4977048..4977222
,4977299..4977506,4977583..4977631,4977854..4978192

Expression

GEO Profiles:Os03g0195300

Genome Context

<gbrowseImage1> name=NC_008396:4973696..4978277 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:4973696..4978277 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaatttcagccatttcctcagggagttcacccaaacacttcagaaccagccatggagcccatggcaagtgagtcatctgtgcccatagggacagcttttgcagacttgctgctgcaagggccagagcacccaagcctgtggaatgatctcaccggcatgttcaggaaggcattccgttggcaaggtgcagacaagcgcttcacactgtctgtgtatgtgatgtctgttctacagggtctgtttccaatacttgactggtggaaaacctacaatctgaaattctttcgaagtgacctcatggctggcctaactcttgcaagccttagcattccacagagcattggatatgcaactctggcaaaactggatcctcagtatggtctttatacaagtgttgtgccacctcttgtatatgctgtgacggggtcctctagggagatagccattggaccagttgccattgtgtcattattgctttcatcaatgattcagaagatagttgacccatctgttgatccagcgttctaccgaaaaatggtctttaccgtgacattccttactggtgtctttcagtttgcatttggtctgttcagactgggatttcttgtggattttctatcacatgctgctatcgtcgggttcatgggaggagctgctattgtgattggattacagcagctgaaggggctgcttggacttagtcattttacaaatagaactgatgtcgtctctgtcaccaaggcagtctgggtttcagttcacgaaacatggcatccggagaacgtcttcattggatgttcctttttcatgttcattcttgccatgagattcattggaaggaagtacaagaaactcttttgggtctctgccattgcacctgtactatcagttgcactatctactctgtttgtctatgcgacaagagcggataagcacggcgtgaagattatacaaaaagtgaattcaggtattaatgcaagttctgtcgagcagatagatctcaaaggaggctatgctgccgaatgtgcaaagattgctcttgtttgtgctgtgattgctctgacggaagctgttgctgttggccgctctttttcagcgatcaatggatatcggttggacggaaataaggaaatggtagcaatgggcttcatgaatatagcaggatccttatcatcatgctatgtagcaacaggttcattctcgcgcacagctgtgaacttcgctgctggttgcaagacaaccgtttcaaacattatcatggctgccactgtgatggttgccttggagcttctcacaaagctcctgtactacacacctgtgtccatccttgcatcaatcattctgtcagctcttccaggattgatcaatgtgcaggaagtctgcttcctgtggaaagtcgacaagatggacttcctcacatgcatgggatcattccttggtgttctattcggatcagtggagattggtctttcagttgcacttcttgtttcctttgcaaagatcattatacagtcgatttggcctcaagtagagattcttgggaggcttcagggcacagaaatcttctgtaacgtcaagcagtatccagtggttcacgaaacaccgactgtactgaccgtacgcattgaaacatcattcctttgcttcgtcaactccagttccatcaaagaaaagatcatgggatgggtaaccgatgagcgcgaggcattttgctcggtcgttcttgacatgtcaaatgtggtaaacatggatacttcaggtcttgtggcgctggaagaactgcacaaggagctggcgtgtctcggcatccagatggctatagccaagcctggatggcaggtgatccacaagatgaaactggcacggctcgtcgacggaatcggagaaggatggttcttcctcacggtgggcgaagccgtggaagcttgcctggcaaacaaggcgggaaacgccctggaatgctgctga</cdnaseq>

Protein Sequence

<aaseq>MEFQPFPQGVHPNTSEPAMEPMASESSVPIGTAFADLLLQGPEH PSLWNDLTGMFRKAFRWQGADKRFTLSVYVMSVLQGLFPILDWWKTYNLKFFRSDLMA GLTLASLSIPQSIGYATLAKLDPQYGLYTSVVPPLVYAVTGSSREIAIGPVAIVSLLL SSMIQKIVDPSVDPAFYRKMVFTVTFLTGVFQFAFGLFRLGFLVDFLSHAAIVGFMGG AAIVIGLQQLKGLLGLSHFTNRTDVVSVTKAVWVSVHETWHPENVFIGCSFFMFILAM RFIGRKYKKLFWVSAIAPVLSVALSTLFVYATRADKHGVKIIQKVNSGINASSVEQID LKGGYAAECAKIALVCAVIALTEAVAVGRSFSAINGYRLDGNKEMVAMGFMNIAGSLS SCYVATGSFSRTAVNFAAGCKTTVSNIIMAATVMVALELLTKLLYYTPVSILASIILS ALPGLINVQEVCFLWKVDKMDFLTCMGSFLGVLFGSVEIGLSVALLVSFAKIIIQSIW PQVEILGRLQGTEIFCNVKQYPVVHETPTVLTVRIETSFLCFVNSSSIKEKIMGWVTD EREAFCSVVLDMSNVVNMDTSGLVALEELHKELACLGIQMAIAKPGWQVIHKMKLARL VDGIGEGWFFLTVGEAVEACLANKAGNALECC</aaseq>

Gene Sequence

<dnaseqindica>4062..4217#3853..3929#3708..3769#3422..3615#3001..3287#2794..2920#1994..2224#1825..1890#1056..1230#772..979#647..695#86..424#aatcaaattcacctgaagcacctaaggttcacatggacttgccatcctcacagctcaccaatcttggaggcaccgatacattgtgatggaatttcagccatttcctcagggagttcacccaaacacttcagaaccagccatggagcccatggcaagtgagtcatctgtgcccatagggacagcttttgcagacttgctgctgcaagggccagagcacccaagcctgtggaatgatctcaccggcatgttcaggaaggcattccgttggcaaggtgcagacaagcgcttcacactgtctgtgtatgtgatgtctgttctacagggtctgtttccaatacttgactggtggaaaacctacaatctgaaattctttcgaagtgacctcatggctggcctaactcttgcaagccttagcattccacaggtaattgtttgttttttgagatgactggaactattgttatcatatatgcacaaattgtgtatgaatcttgtctgaatcgagcaaactcctgggatttctctatcaattccttgatgcatttcctcaagtcgtcagtagtgactgacttctttacttagaaggttggaattcgcctagattattcagatatttctgacttgttttattgtcctgttattatagagcattggatatgcaactctggcaaaactggatcctcagtatggtctttgtaagtcattgcagatttaacttggttttatgtgttctaaatgttcttttgacatatggttttattttgtggtaagatacaagtgttgtgccacctcttgtatatgctgtgacggggtcctctagggagatagccattggaccagttgccattgtgtcattattgctttcatcaatgattcagaagatagttgacccatctgttgatccagcgttctaccgaaaaatggtctttaccgtgacattccttactggtgtctttcagtttgcatttggtctgttcaggtagtgtctctgccgtcttttgatcaaaatgcgcttacttacattccctaactgacttttgcattgattcttgtagactgggatttcttgtggattttctatcacatgctgctatcgtcgggttcatgggaggagctgctattgtgattggattacagcagctgaaggggctgcttggacttagtcattttacaaatagaactgatgtcgtctctgtcaccaaggcagtctgggtttcagttcacgaaacagtaagtatttgcccttatattcaatctgaacctgtgcatgcgcaggcatatgcctggaagttatgataacacataatatgatcactaaaacaaaatattaaaattataagctttaacacatatgaaattaactagtccaaagtatcaagccaaaaaataggtacaagttcccttcgacacaaaaagagataaagctgtatgaatgaaattagctactcaattcagcatgcatgacaacagcaaaaaaactgctagctcatcagtatagttcttagtatttcttactacttaatagtatgagctaattgcttcttcagttgctgaggttttcagtaatcatgaggagagaagtgctgatgcatgcataaaactacaattctttagacatatacttagccagtacacttactatagccttgcaaatttattctctacagattttgtaacaaagcaatcatgagtatatactatatataagtaattgtaactttagttctcacttgtcaggatgttacctaagcgtgcttttgccccattaatccttatatttgagctgcctttgtatgcaattttatatctggcatgtaacgacagtggcatccggagaacgtcttcattggatgttcctttttcatgttcattcttgccatgagattcattgtaagatctctctctctctctctctctctctctctctctctctctctctctctctctctctctctcgatcttgatcttgatcttggagaacgaatactttcagggaaggaagtacaagaaactcttttgggtctctgccattgcacctgtactatcagttgcactatctactctgtttgtctatgcgacaagagcggataagcacggcgtgaagattatacaaaaagtgaattcaggtattaatgcaagttctgtcgagcagatagatctcaaaggaggctatgctgccgaatgtgcaaagattgctcttgtttgtgctgtgattgctctgacggtacgtgtttacccttcaaagatagtcctgcactcctgctcctctccctgtaaaacgagaagaagaagaagataatcctgttgtttcttcattcttataatttattaggccttttgtacaaattagactcaggttgttgtatcaaaactttgcttccttgctaaaaataatgcacttcaaaagaaataatgtgacttactcctatactcctagtgctgcagcgtatttgtcaagagagtagtgcgtatatacttttacaaacagaaacgtgtgcggcctaaaatctcatcaggcattaattagagaaaattgactcctccactatttttattttatataaagctatgaagtgaactactcattttaaacaaaaaaaagtgagtaggcataagcttaaatgaacttctgcagaaattattaaaagtataaataagtctagcctaaaggagtattcagagttcagacagctattagtagaaactcactaagcatttcagaatcactcaataggaggtccatatgaaaactgagtttcagaaaactattctggtctgtgttgtttatgacaggaagctgttgctgttggccgctctttttcagcgatcaatggatatcggttggacggaaataaggaaatggtagcaatgggcttcatgaatatagcaggatccttatcatcatgctatgtagcaacaggtgaataaaaaatctgcagatcgtatgtacattcctagattcgttcaaccatcaaactttactttggtaattatctgcaggttcattctcgcgcacagctgtgaacttcgctgctggttgcaagacaaccgtttcaaacattatcatggctgccactgtgatggttgccttggagcttctcacaaagctcctgtactacacacctgtgtccatccttgcatcaatcattctgtcagctcttccaggattgatcaatgtgcaggaagtctgcttcctgtggaaagtcgacaagatggacttcctcacatgcatgggatcattccttggtgttctattcggatcagtggagattggtctttcagttgcagtactgatccctcatttgatctgaagtttactactgtattttttttttcattttgattcatcagaagtatgttgaagtttcatttcttgcatgcatgcttatgcaattctgatttggtggagctcttcttgcagcttcttgtttcctttgcaaagatcattatacagtcgatttggcctcaagtagagattcttgggaggcttcagggcacagaaatcttctgtaacgtcaagcagtatccagtggttcacgaaacaccgactgtactgaccgtacgcattgaaacatcattcctttgcttcgtcaactccagttccatcaaagaaaagtacagacactaatcacaagcaattgggatcacaaaagggaatacctgaatgctggatgactcggtattaattcacttttccctgtttccaggatcatgggatgggtaaccgatgagcgcgaggcattttgctcggtcgttcttgacatgtcaagtatatgaaatttacacaagttggctattgtcagagtgatctctacctagcattatcctgacatgtgagttcctatcttgcagatgtggtaaacatggatacttcaggtcttgtggcgctggaagaactgcacaaggagctggcgtgtctcggcatccaggtgagcgttaccaacatgctcaggtttccaacatatgtatagagtttgcactgcatattttcctccgaaaagctggccgatgctgtggtgaaatgctctcgcccttgtcctgaaaaacaaccccacttgcagatggctatagccaagcctggatggcaggtgatccacaagatgaaactggcacggctcgtcgacggaatcggagaaggatggttcttcctcacggtgggcgaagccgtggaagcttgcctggcaaacaaggcgggaaacgccctggaatgctgctgaatcgaatccaccgtgtgcatggtctctccggtggttgaataaagagagacactagtgcttcgtggtacgctacaaaaggattgtgttgtgtgctagtgctgcacgatgatgcagcttcagctgtagtgtggtgcttcatggattgtgcgacgtgcaactgttgggggaagacgaactgtgtctgtctgaacttagtatgccgagttcgtctaaattccccactatagctgtaggtttgtgatgtatcggatgcatttgtgaagagcaaatgccaggttttaagtgttggaactgatgattgtgtaatattattatattaatcgagtttgtataattaatttgtactcgagtttgtgcgttttggc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0195300, RefSeq:Os03g0195300