Os03g0197000

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Revision as of 12:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0197000| Description = Conserved hypothetical protein| Version = NM_001055803.1 GI:115451334 GeneID:4331944| Length = 4690 bp| Definition ...")
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Gene Name

Os03g0197000

Description

Conserved hypothetical protein

Version

NM_001055803.1 GI:115451334 GeneID:4331944

Length

4690 bp

Definition

Oryza sativa Japonica Group Os03g0197000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5113000..5117689

Sequence Coding Region

5113266..5113273,5113689..5113771,5114529..5114625,5114737..5114941,5115032..5115099
,5115411..5115699,5117470..5117478

Expression

GEO Profiles:Os03g0197000

Genome Context

<gbrowseImage1> name=NC_008396:5113000..5117689 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:5113000..5117689 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagcagatgtctcgaccatcagtgattatcaagctgattctggggttgctttggttcatcgtccacttagcaatcagcctttgcagtttatggtttgatctgatctacagtatagaatgctatctcatttcattcgggctgattccaaagtatcggaaattccaactggataggctcaaacacttggctgttgtggtagatagcagagaagctaaaaatgttgcaaagatcaatcagctcttatgttggctctcaaatgttggtgtgaagtatgtatgtctttatgacattgatggagtgctgaagaaaacatttgcacctgctatgaatggttcaagatatgggaattcaggaaaatatctggatgtgggtgcaaatacaaaagctttgacctgttgtcataaagagatgacaatagagtgtatttctggttctgatggcaaggatgggattgctaaagcagccagcttactttgctcaacttgtgtgaacggcaataggaatacttgtggaaatggtgaaatagtatttacagaagctgacatgtccggtgcattgaaagcaataggttgtggtggaccagaacctgatcttcttcttgtgtatggccctgctagatgccatttaggttttcctgcatggagattgcggtatactgagataatgcatatgggaccactgaattcaatgaaatatggcgccattgtgaaagcattctataaattctcgaagaaataccaaaattttggtaaatga</cdnaseq>

Protein Sequence

<aaseq>MQQMSRPSVIIKLILGLLWFIVHLAISLCSLWFDLIYSIECYLI SFGLIPKYRKFQLDRLKHLAVVVDSREAKNVAKINQLLCWLSNVGVKYVCLYDIDGVL KKTFAPAMNGSRYGNSGKYLDVGANTKALTCCHKEMTIECISGSDGKDGIAKAASLLC STCVNGNRNTCGNGEIVFTEADMSGALKAIGCGGPEPDLLLVYGPARCHLGFPAWRLR YTEIMHMGPLNSMKYGAIVKAFYKFSKKYQNFGK</aaseq>

Gene Sequence

<dnaseqindica>4417..4424#3919..4001#3065..3161#2749..2953#2591..2658#1991..2279#212..220#atcggcctgattatttttcgtatttttctactccacctttcgtcttcgaagtcctcctccagatcgtgagtgaattggggaaaacaaacctctctccatcaccggccgcagcagccgcctccgcctccgcctccgcccgcaccagatgcgacgctgaccggctcaccggcggaagcgcggcagcggcgcggccttcggttcgagcggtagcatgcagcaggtctcaacccccttccctccctgctttaccgtggaaaaaccttatttggcgcgtgcgtttcgtggttcgcatgctaggtgtttgtggcaatgcgtgagaagaacaaccagccgaccagttcctcggcattactgagcagcatgaagccgtgcccgtgcgagagagatatggttggatgcgagcaaagtaaattattgagctcgactttgaatcgataccacgcgtttggtgcattggcttttagtttattcaactggtgcttgatgtttacatgtgcatatgtaagctagtacctgcaacgatgccgtggaaatcgctcactggctaaagcctctaaaaaaaggaagttaataaaccttttagaaaacgaaaaaggggagaaattctccgaagactctagtagtctagtctctagcataggaacacgatgcgtcaacagcacagctgatacgccagacgctatgatataacaacccataagagttctgtgattgtagctcttgccagctccagccacaaattcgatttctctgttttttgatagatcgtagctggtcttggtgcatcctttggtttcttctcatctatctcagctcagctgtgacgcaattgattccaaggccatgtcagatttgtttgcttgccttcgctttcgtctcataatcccatttccttgctgtactctcttcttttctctccctttctcctctgttatttgttagtctcttttttattaagaaggatggtactgtaatccctggttcagacaataagttcagatcaacttctcaaaattttgacgctcacacaatttgctagatgtatgatatccactttgtcctttctcaagaaataattatcttgtggttcttgtgcagggcggcatttgtggccaatgagattcccctattcatgaatcagtctcctccacatgtatggatgctggtgaatttagctcttcttcttgccgtcctgtagagacttatttccctcctatttatagaatgagattgaattaatatagactaaaaacttgcgtgtgtattctttctgtgaataagggtaggtaggctgggttgctattgtcctgcagaaacgtactatttttaatcttacagacgggttttttgcagtgacagtctgtactggtgagtggaagggataagtatagcagagacaatgcattaacttcttttggagtagtttcctatttgtttctatttgcaattgcttgataaagaagatttctgtgatttgtctcttttgacatatcatgaccttagctgaaagttttcttgttgacctcgtccattattttgatgatcctagctgaaagttcaatactgacttagtccaataaaaaaatttcaattatgtcaagctatcatatttgttgtcttggctttccttggaaagatctcctggtattgcaaccctattttaaattgattcaagttcttcaagttattgccttgttggggacaatgtaaatgtcaacctttttgtttcatgctgatccattctcagttttcatgtattgtttgaattgagtatcagattctcaagagtaatgttgtgacacataagcaatatgcatggtataacaatccagttgtcagatgctattaccattaaatcatttgaactcattaagggttagattccaaagccaattgttgcaaatggatatacttctctgtttcctgaaatatatgtctattgttggggaagaaagaacattgaaagttgtgcctctgtctcgatgtgcagatgtctcgaccatcagtgattatcaagctgattctggggttgctttggttcatcgtccacttagcaatcagcctttgcagtttatggtttgatctgatctacagtatagaatgctatctcatttcattcgggctgattccaaagtatcggaaattccaactggataggctcaaacacttggctgttgtggtagatagcagagaagctaaaaatgttgcaaagatcaatcagctcttatgttggctctcaaatgttggtgtgaagtatgtatgtctttatgacattgatggtaagacaatgagtttgctatttgcatttgtagaatgctattgtttcctttgcagaatatctccagtggcctagtacatacatataacattttccctttcatcaaaatgaacatgagtataagaaattaaatggctttgagaaacagtggtctttgttatttggagaacagtggatgaataattcaaattatagccatgtttccttttaatccttttacactttagtttctgatatttaagcaacactgtgtcactgtctagtgacctagtgcacaagggatgcacattaacactttatgttgcaccataggagtgctgaagaaaacatttgcacctgctatgaatggttcaagatatgggaattcaggaaaatatctggtaagtcacataatcgagctttttgttgctttgttttcttattccatgacattgatctcgatattccctcatgtccatgacaacatgtaggatgtgggtgcaaatacaaaagctttgacctgttgtcataaagagatgacaatagagtgtatttctggttctgatggcaaggatgggattgctaaagcagccagcttactttgctcaacttgtgtgaacggcaataggaatacttgtggaaatggtgaaatagtatttacagaagctgacatgtccggtgcattgaaagcaataggtatgcttggaaaaccttccatttttaatgcatgttgtaatttataatactcatttatcagttatatcattataaatctatatgaccaattgttcctgctgcgttcattaggttgtggtggaccagaacctgatcttcttcttgtgtatggccctgctagatgccatttaggttttcctgcatggagattgcggtatactgagataatgtatgtgtttttttttggtcattttagtttttctgttcacattttgcattgatcctgtgataatgaactcaaactacatgcgcaccactcttgtccctcttattccaaatgtaggtccttatagagttatgcttagaaattaagaaagtgttaagtgaccttgttgccctgtagtaattacacactagaaatggtacctcatacatgggagttgtagcattcaatgagcaaaggcataggaggaacaaatggaggacatgccttgaagtcagataacaacatacttttagagaagagtagagaactcttcattttaaatcagagggagtaaaaaagaaagaatatgatacacagaataactcctgctcatgcctatagtaatatcattatagaataagattattcaaattttagcgtgatcatatggcattacaacaaacagactcaatttcgcttttaggtgcgtaagcccatgtatggtgtaattaaataaccattcagtacccaatctagtcactattttcttgttcccaagtaatagttcttttatactttgagctatttaattatcctccaaagagatatttatataccagtcctaacaggtttgcatgtaaatgttaggagaggtatctttatcttcataaaaggactgcatgcttcaatcatattctgaaatcatgcacctcggcaattcgatctcattatctatttgactatttccaccattgaaatatctcttccatgtctcatccaggcatatgggaccactgaattcaatgaaatatggcgccattgtgaaagcattctataaattctcgaagaaataccaaaattttggtaagtttgttttctcattcctagaaaatagaaatatactgcagtgaaattaatctgtctgtttatctatgttttacaagcacagcaacattttgtttgacatttaccttgggccctatgaaaataaggttcctacggatgaactcacaatgtcatcttcttttcccttaaaaagctatgttttcatattttggatggcctcgttttcacctaggaattaacacaaaaattatttgcgcatggtaactttgaatgttgtcctgggatgttttcactctcaagcattacctacgcttaccaaccattcatatggaaagaatgtgccaatagctctgaatgcactaacacggctttacccttcgattataatgcatagttacttgtttatagctgacactaacgttttacatctcaggtaaatgagagctgatactgagatagagaagacaacatgtcatgtgtagaaagccactcctggagctggaagcttaacaatagttttgcctttctttttctttttatcccatgttgctgatcactatactaaacgttacgagcaataattcacagatacaccttgtacttgcttttgcaatattgtaagtgttgctgatagaacatacgggaaattatatcccattgtataacttgctcccattctaatgtgtgatgaggcagttcttgaccac</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0197000, RefSeq:Os03g0197000