Os03g0198900

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Revision as of 12:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0198900| Description = DNA glycosylase family protein| Version = NM_001055816.1 GI:115451360 GeneID:4331957| Length = 2635 bp| Definition ...")
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Gene Name

Os03g0198900

Description

DNA glycosylase family protein

Version

NM_001055816.1 GI:115451360 GeneID:4331957

Length

2635 bp

Definition

Oryza sativa Japonica Group Os03g0198900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5227554..5230188

Sequence Coding Region

5227859..5228203,5228525..5228669,5228754..5228895,5229272..5229893

Expression

GEO Profiles:Os03g0198900

Genome Context

<gbrowseImage1> name=NC_008396:5227554..5230188 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:5227554..5230188 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctctacgtgtggcaacgcttgtgcgtaacggcacgaggcgttggacccaaggcaccaaatccccttatccctcgtcgtgccgaggccgttgcacccgccgccgaccgcgacgtccagcccgacgcgaccgaccttgccgacgaggcgacgacgccgtaaatccaaatgacgcatctgcccctgccagagcgttcgggatttgcaggcaggggcagttccgtcctctcacagacgtttcaaaaaatccttattacgagccgatcatccccgcgcctgctccaaatcactgcaattgcagagctcaaaggcttgcttccgagatgccaggcctaaggcccgagtctccggcaatcccatcgccagagctccgccgtgtccggacgtcgttcaccggagcttcttcctgggtagccacgactgccatgggtaaggtggtacgatcagccaatgcgccggtcgagccgaaggcgaaggtagaggatgtggagaagcagaggaggaggggtaagggaggttgcaatgggaccgtctcgtcggcgaggtgtaggagcccaccgccgtctcctgtcagcccggagctggggaagacgaggtgttcatggatcacagtcaactctgaacccctttatgttgctttccatgatgaagaatggggagttccagttcatgatgaccagaagctgtttgagctgcttaccttatcacaagccttagctgaaatcacctggcctatcattctgaacaagagggacgaattcagggagatgtttgatggtttcaactatgcatcagtgtctgagttcacggacaagaagataaaccttttgtcgaaatcaaatggaaacatgctactttcggagcaaaagatacgggctgttgtaacaaatgccaagcaaatgcataaggtaatccaggatttcggatcgttcagcaactactgttggagcttcgtaaaacacaaacccgtcaaaagcaacttccgctatgctcgccaagtacctatcaagacgcccaaatctgaggccataagcaagggcctgatgcgacgaggcttccaatgcgttggccctacgacaatctactccttcatgcaggtttctggcatcgttaacgaccatctgtcatgctgcttcaggtttcaggattgcagagatatcaaaaggaacctgagagctgagccaggattgatagaaagaaggttgaactcaccgccttcctcagaagactctgaaactagcagggaggcgtga</cdnaseq>

Protein Sequence

<aaseq>MPLRVATLVRNGTRRWTQGTKSPYPSSCRGRCTRRRPRRPARRD RPCRRGDDAVNPNDASAPARAFGICRQGQFRPLTDVSKNPYYEPIIPAPAPNHCNCRA QRLASEMPGLRPESPAIPSPELRRVRTSFTGASSWVATTAMGKVVRSANAPVEPKAKV EDVEKQRRRGKGGCNGTVSSARCRSPPPSPVSPELGKTRCSWITVNSEPLYVAFHDEE WGVPVHDDQKLFELLTLSQALAEITWPIILNKRDEFREMFDGFNYASVSEFTDKKINL LSKSNGNMLLSEQKIRAVVTNAKQMHKVIQDFGSFSNYCWSFVKHKPVKSNFRYARQV PIKTPKSEAISKGLMRRGFQCVGPTTIYSFMQVSGIVNDHLSCCFRFQDCRDIKRNLR AEPGLIERRLNSPPSSEDSETSREA</aaseq>

Gene Sequence

<dnaseqindica>1986..2330#1520..1664#1294..1435#296..917#atatacagataacagattggtaatgaccaaaattccatccaccgctgggtttcagctcaaatacctcaccactagttcttgagcccctattctggatttggatccatcctgtaccaaacattcccgtgtcaattggtacaaaatcttgatagaatataatggtgtctatggccaaggctatttctcgtgtcactctcttcttgacgtacacagcctttgccattctcattggaggagtgcatctgcagaatgtgcgtgtcgagcagcagaatggagaagcagcagcatcagctctatgcctctacgtgtggcaacgcttgtgcgtaacggcacgaggcgttggacccaaggcaccaaatccccttatccctcgtcgtgccgaggccgttgcacccgccgccgaccgcgacgtccagcccgacgcgaccgaccttgccgacgaggcgacgacgccgtaaatccaaatgacgcatctgcccctgccagagcgttcgggatttgcaggcaggggcagttccgtcctctcacagacgtttcaaaaaatccttattacgagccgatcatccccgcgcctgctccaaatcactgcaattgcagagctcaaaggcttgcttccgagatgccaggcctaaggcccgagtctccggcaatcccatcgccagagctccgccgtgtccggacgtcgttcaccggagcttcttcctgggtagccacgactgccatgggtaaggtggtacgatcagccaatgcgccggtcgagccgaaggcgaaggtagaggatgtggagaagcagaggaggaggggtaagggaggttgcaatgggaccgtctcgtcggcgaggtgtaggagcccaccgccgtctcctgtcagcccggagctggggaagacgaggtgttcatggatcacagtcaactctggtgagtttttttttttttgttactctgcactcttatcaatttccacccagcgagaaggaattgtgtcttgtatgatttgaacaagatttttgagaaaacgtttcaatgttttattctgttcaagaaaaatgtgttggcaaatatacaatcttctgcattttgcgctggaataataacataactgaactccatgcaattttgattgatttgtggtcaatgtcacaaaaaaggattggtagtggaaggcttttgaactggcgatctgtgatttagccctataatttttatccatgaattacccaaaagcatgacgttcaattttgtgctagtatataactgcagaactaaagctcttcatgacacttcatttcttcagaacccctttatgttgctttccatgatgaagaatggggagttccagttcatgatgaccagaagctgtttgagctgcttaccttatcacaagccttagctgaaatcacctggcctatcattctgaacaagagggacgaattcaggtctgcttttcagagtagatgacacatctaaaagagagtgcttaaatgtgaaatatctactgaaacttaattgtctttcatcagggagatgtttgatggtttcaactatgcatcagtgtctgagttcacggacaagaagataaaccttttgtcgaaatcaaatggaaacatgctactttcggagcaaaagatacgggctgttgtaacaaatgccaagcaaatgcataaggtaagagaaccatgtatgctattatttcagctgtttgatgcaataaatcaaaatactttgttcaattcgttctttaaaagaatagtttgttcggcctttatctgaagatacagtaatgaatatttcccgcttgcagtttccatcagttatgtttcttgaattatttatacttcaaaattaatacatactttgatagtactccctccattctaaattgatctacatatttcatagttacaccaagacaaaaaaaaagctaataactctctcatactacatttactctagtaatatgttactactggcgatacatatctgtaggtaatccaggatttcggatcgttcagcaactactgttggagcttcgtaaaacacaaacccgtcaaaagcaacttccgctatgctcgccaagtacctatcaagacgcccaaatctgaggccataagcaagggcctgatgcgacgaggcttccaatgcgttggccctacgacaatctactccttcatgcaggtttctggcatcgttaacgaccatctgtcatgctgcttcaggtttcaggattgcagagatatcaaaaggaacctgagagctgagccaggattgatagaaagaaggttgaactcaccgccttcctcagaagactctgaaactagcagggaggcgtgactggtgctcactactgaacttattaacctgaattacatcggtattcaagaacgtaactatatgattctttgctggtttgtcctcattgggtgattattttgtgttgtatgttgtagccatgacagtttgagctatgcattttatgttgtcactccttgagcaatgtatattgtataggttgttgtacagatcgtttgacgaaacagtgcggtatagtttgtttggggacttgacttgtaacatacctgtatattatataaactagcattggatggttttgatgtatcactgagtggttttctact</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0198900, RefSeq:Os03g0198900