Os03g0200500

From RiceWiki
Revision as of 12:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0200500| Description = 40S ribosomal protein S3a (CYC07 protein)| Version = NM_001055824.1 GI:115451376 GeneID:4331966| Length = 2269 bp| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0200500

Description

40S ribosomal protein S3a (CYC07 protein)

Version

NM_001055824.1 GI:115451376 GeneID:4331966

Length

2269 bp

Definition

Oryza sativa Japonica Group Os03g0200500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5302268..5304536

Sequence Coding Region

5302336..5302394,5302513..5302618,5303426..5303563,5303634..5303819,5303915..5304115
,5304202..5304300

Expression

GEO Profiles:Os03g0200500

Genome Context

<gbrowseImage1> name=NC_008396:5302268..5304536 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:5302268..5304536 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgtaggtaagaacaagcgcatctccaaggggaagaagggatccaagaagaagaccgtcgatccctttgctaagaaggactggtatgatatcaaggccccgtcggtgttcaatgtgcggaacatcggcaagaccctcgtgtccaggacacagggtacaaagattgcttctgagggcctaaagcatagagtgtttgaggtctccttagctgatctccagaacgatgaggatcaggcgtacaggaagatcagacttcgtgctgaggatgtgcaagggaagaacgtgctcaccaacttttggggcatgtcgtttactaccgataagctcagatcacttgttaagaagtggcagacactgattgaggctcatgtggatgtcaaaaccacagacggctacatgctgcgtctgttctgtatcggcttcaccaagcggcggcctaaccaggtgaagaggacttgctatgctcaagcgagtcagatcagacagattcgtcgcaagatggttgaaatcatggccaaccaggcttcaagctgtgatttgaaagagctagtttcaaagttcattcctgaagttattgggaaggaaattgagaaggcgacatccagtattttcccccttcagaatgtgtttgtccgcaaagtgaagattctaaaggccccgaaatttgacctggggaagctcatggaggtgcatggtgactatgccaaggaggacatcggtacgaagcttgataggcctgcagaagatgaggccatggccgggcaggaggtcgctgctgccgagtag</cdnaseq>

Protein Sequence

<aaseq>MAVGKNKRISKGKKGSKKKTVDPFAKKDWYDIKAPSVFNVRNIG KTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIRLRAEDVQGKNVLTNFWG MSFTTDKLRSLVKKWQTLIEAHVDVKTTDGYMLRLFCIGFTKRRPNQVKRTCYAQASQ IRQIRRKMVEIMANQASSCDLKELVSKFIPEVIGKEIEKATSSIFPLQNVFVRKVKIL KAPKFDLGKLMEVHGDYAKEDIGTKLDRPAEDEAMAGQEVAAAE</aaseq>

Gene Sequence

<dnaseqindica>69..127#246..351#1159..1296#1367..1552#1648..1848#1935..2033#gtttctcctcgccgcttccacctctctcgcgccgccgccgccgccgagcgcctggagcagcgtcagccatggccgtaggtaagaacaagcgcatctccaaggggaagaagggatccaagaagaagacgtgagtgccctcctgcccaccgttctctcctcctcctcctgcttagagatccaaaccccttcatttttactcgctagtcgctacatgggttgttgatgcagctttgcatttcttgcagcgtcgatccctttgctaagaaggactggtatgatatcaaggccccgtcggtgttcaatgtgcggaacatcggcaagaccctcgtgtccaggacacagggtacaaaggtatgagcaccgcttccttgttcttggccgttgtataattctctgttgtgtttgcgctaagtgtttgctgcctaacccttcctgtgaacgaagggatctatacgaccttgacattgtcaactcgccatgtgatggattttgcaaattttgtaactttgctatgtgtgtgtgtgcactgcgtatggtaggattgatctatatgctgtactaagggctaagatagcatgggaaatatatgatgtattattagcatgttagttccatttttgttcctgatgagaggttacagatgctggtttggatgagcttagttattccgaatagatttgtcttctggtttagcttgtctagttgtacctcccaattgtttatttcatcaaacgtcaaacagcgtggttcaattgttgagagcttcctttagtgtgggattgagtttgtcttctagtttcactaatttgtgtgtttacctgcctttgtttttctggttatgcactatgcagtattagtatgcataataaaacataatgccatattgttgttacttgttagggattcttgtgctgttttaagacgtctgtataactgtactgcaatgggtacaaacattcttcactgtagagttttggggttgccatatgtaggatatatgagtaattttgttcatatatttgatggttacagtgcttcaattgtaggtattattttaatttgtctgttcatcatgctttaggtctgtcaacctctaaacctgtagctgtcataatttatgatgtcatctgctgattctcaatatttctttcgttttagattgcttctgagggcctaaagcatagagtgtttgaggtctccttagctgatctccagaacgatgaggatcaggcgtacaggaagatcagacttcgtgctgaggatgtgcaagggaagaacgtgctcaccaacttttgggtaattattccttcataggagaaaattacttctattagatttattttgttgctaaccagttctattgtagggcatgtcgtttactaccgataagctcagatcacttgttaagaagtggcagacactgattgaggctcatgtggatgtcaaaaccacagacggctacatgctgcgtctgttctgtatcggcttcaccaagcggcggcctaaccaggtgaagaggacttgctatgctcaagcgagtcagatcagacaggtaatttcatttccaaggtctcttactgattgatgtatattggtccactgttgagcagctgctatatttactgtctttgattgcaatctgcccagattcgtcgcaagatggttgaaatcatggccaaccaggcttcaagctgtgatttgaaagagctagtttcaaagttcattcctgaagttattgggaaggaaattgagaaggcgacatccagtattttcccccttcagaatgtgtttgtccgcaaagtgaagattctaaaggccccgaaatttgacctggggaagctcatggaggtgactgttgcattcagtaccgtttcatttcaggcttgtatgttgtgtcaatcaacaaacttgacatgacttgtctcttgttccaggtgcatggtgactatgccaaggaggacatcggtacgaagcttgataggcctgcagaagatgaggccatggccgggcaggaggtcgctgctgccgagtagagattatcacttattttgctgcccgtttatttagacaacaagtaaacagctatctagttgtggatcgtgaacatcctagcctgtgtcaatggcagatattctgaatagtttgttgggattacttgccagctgcatatttgctttctgatgagaaatgaatgtttttgagtctatgcgtttgctttgtttggtcttgatgatgaagttaagaattttgaagtaattgtttggtctgg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0200500, RefSeq:Os03g0200500