Os03g0200700

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Revision as of 12:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0200700| Description = Similar to Surfeit 1 homolog| Version = NM_001055826.1 GI:115451380 GeneID:4331968| Length = 3386 bp| Definition = ...")
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Gene Name

Os03g0200700

Description

Similar to Surfeit 1 homolog

Version

NM_001055826.1 GI:115451380 GeneID:4331968

Length

3386 bp

Definition

Oryza sativa Japonica Group Os03g0200700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5310795..5314180

Sequence Coding Region

5311190..5311259,5312096..5312379,5312676..5312859,5313404..5313654,5313761..5313864
,5313983..5314121

Expression

GEO Profiles:Os03g0200700

Genome Context

<gbrowseImage1> name=NC_008396:5310795..5314180 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:5310795..5314180 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcgctgtccaagctcctccgccgtcggctgcgcggcggcgggcaccgcctgctcccgtcccgtccctccacctccgccgcctcccagccacctccgccgcctccttccgccgccacaccgccaccaccaggggcagggaaggaggcgggcgcgtggtccaagctcttcctcttcgcccccggcgccatcaccttcggcctcggctcatggcagctcttccggaggcaggagaagattgagatgctggactacaggacgcggaggctggagatggagcccattgcgtggaaccagatggccccgtctgatctcagtgccggggtcgatccggccacaccggagttccggaggatcgtgtgcgagggtgatttcgacgaggagaggtcggtgttcgtcgggcctcgctccaggagcatctctggtgtgacggagaatgggtattatgtggtcactccattgataccccggcctagtgagcatggcagttcgtggccacctatacttgtgaatagagggtgggttcctcgtgattggcgtgataagaacgtacaggatcaccagggcgtcagagaagttccagaatataaagaggctgataaaaagacagatggaaaaggttcatggtggaagttttggtctaactctaaggagcctgaacaatcttgtgagattgaaaaacctgtaaaacctcctgtaagagttttgggagttatccgaggaagtgagaagcccagcatatttgttccagctaatgaacccagtgttggccagtggttttatgtggatgttcccatgattgctcgtgcatgtggcctccctgaaaatactatttatatagaagatataaatgaggatgtctctccaacaaatccttatcctgttccaaaagatgtcagtactttgattcatcactcagtgatgccacatgaccatctaaaatacaccgttacatggtacactctttctgctgctgtgactttcatggctgcaaagcggataaaggcaaagaaggttaagttatag</cdnaseq>

Protein Sequence

<aaseq>MAAALSKLLRRRLRGGGHRLLPSRPSTSAASQPPPPPPSAATPP PPGAGKEAGAWSKLFLFAPGAITFGLGSWQLFRRQEKIEMLDYRTRRLEMEPIAWNQM APSDLSAGVDPATPEFRRIVCEGDFDEERSVFVGPRSRSISGVTENGYYVVTPLIPRP SEHGSSWPPILVNRGWVPRDWRDKNVQDHQGVREVPEYKEADKKTDGKGSWWKFWSNS KEPEQSCEIEKPVKPPVRVLGVIRGSEKPSIFVPANEPSVGQWFYVDVPMIARACGLP ENTIYIEDINEDVSPTNPYPVPKDVSTLIHHSVMPHDHLKYTVTWYTLSAAVTFMAAK RIKAKKVKL</aaseq>

Gene Sequence

<dnaseqindica>2922..2991#1802..2085#1322..1505#527..777#317..420#60..198#agtcgccgctgtcttgcggcctcctccggtccaagccccctgatcccctgacctcaaagatggcggcggcgctgtccaagctcctccgccgtcggctgcgcggcggcgggcaccgcctgctcccgtcccgtccctccacctccgccgcctcccagccacctccgccgcctccttccgccgccacaccgccaccaccaggtgaggtctcaaccctccaccgcccccgcgaaatgccacacgagtacatctgcggagcgagaccaccggtgcgatccccccccccctcgctctaactaggttcgttttcccttcgcaggggcagggaaggaggcgggcgcgtggtccaagctcttcctcttcgcccccggcgccatcaccttcggcctcggctcatggcagctcttccggaggcaggagaaggttcaaagttcacaccacgcatgcgcgccttggttcgttctctatgtctagggaaatgaaggggggaagaggcctcacgccgtggttttttcttgccctgtcgcagattgagatgctggactacaggacgcggaggctggagatggagcccattgcgtggaaccagatggccccgtctgatctcagtgccggggtcgatccggccacaccggagttccggaggatcgtgtgcgagggtgatttcgacgaggagaggtcggtgttcgtcgggcctcgctccaggagcatctctggtgtgacggagaatgggtattatgtggtcactccattgataccccggcctagtgagcatggcaggtaaaaggttgttggaaacagcattgcgctcttgcgatgaaactgttagttccggtgaacgtgatgccatcaatttggtttaagttattctcaagattaggatagagaaacgaatcaacgatgaacataagatctacctgactaaaatggaactaacgtatcattatttgtctcagtagagaagctctgcacaagccataatctcaaattggggtgtatagcttctaataaatgtttctgcattacattacatttctgataagctgaacttccacttgaggttgtgttgtgcgatatgccatctatccatgcttggaccggtattagcaaagtttttcttcttttttttttccccgtgaagatgttgcgatcttacaattagttctgaattaagtttctcctcacgttactaacacagagaacacataaaaagaaacatagttgcctgatgctgtattgcttgcttgaaccatagaaacaaactacattgtcttatttcttccatgtttcttaaaatatttgtatttctgaaaaatattgtcagttcgtggccacctatacttgtgaatagagggtgggttcctcgtgattggcgtgataagaacgtacaggatcaccagggcgtcagagaagttccagaatataaagaggctgataaaaagacagatggaaaaggttcatggtggaagttttggtctaactctaaggagcctgaacaatcttgtgaggtgattttgcattcctttatttgcgtcgtttccaacctattgcttaaaaatgttaatgctttctgctttgctcatcagatcaagtttatgcattgatatcttatcagcaacatggtacataaacttattgtgcatgataacaatgtgacagcacattatcaaatatctttttatgaataaccaaccaggcgtgctttaaatcattggttgtagttgttgatggtttgtgtgtggaaaccactgtgattattgtccgtgcataaatttgatgcaaattgcttttccaccttttgcagattgaaaaacctgtaaaacctcctgtaagagttttgggagttatccgaggaagtgagaagcccagcatatttgttccagctaatgaacccagtgttggccagtggttttatgtggatgttcccatgattgctcgtgcatgtggcctccctgaaaatactatttatatagaagatataaatgaggatgtctctccaacaaatccttatcctgttccaaaagatgtcagtactttgattcatcactcagtgatgccacatgaccatctaaaatacaccgttacatggtaagtgcctattaacttcaataccttgcacattcctcattgttggtggggtgtgtgaaatctataataactgctacatttttatatgatgatctataataattgctacagctttacttgacaagttttatgagtgctatctagttgattacttgattatgactattccattcattcttggattgttattactagaaatgttaagactcccaatagatagttagatactattgctcatattagaaaggttcagagcaatttcctaccgtatcgggtactcactatcgcatttaagccttttgtctttacagaactgccaggtgtaatctgttgataccatttgcttccttagatagttatgtggtattctttcactaaataatgttccaactaagtggtaggatatcatatatgcacatgaaatgcaatactgtagtgaaaattgagttgcagaaactggagaatgtacattacaagaatgtgactctggactggagtaggaacacatagtatggggtttgtattccaaactctctgggctggttatgtactgtgttgttctgtttcagctgagactggaaagctgttgtgtctcctttatagaaaaaaaaaattatcccaaactcttcttaaggtctgcccatattacatcagattagcttgcatatggcacatatatatgcaggcaaattttctcgctgtaatcatgcactaaaattttgcaatcgtcagctagatacataattgtttctttgactgctatggttacagttggtatcattcttgctggtgtatttgtgtgtttatgaccacctactatctttcgttgttattaggtacactctttctgctgctgtgactttcatggctgcaaagcggataaaggcaaagaaggttaagttatagcggaacataaacctgtctcctgcatcttgtacttatttatgaagctcaagttcccgctgcttcagaaagagatgttcgataacctgagtactgcatcttcatctctcaggcaatgatcaaagtagtcttgccacatttgatatgatgtgcatccatatgggcatctcgtagttgaactcagaggatagaaaagttttgttagcagcttctgatatccttgattcttttgttacggaacttacattgaggaaacaacgtagacattgttatttgtttctattctttgtagtttttttgttcaatgagctagtcgtccacgaggttgatggtgcttgcagaagcaattttacagtacttgctgattttatctgaaaaataaaaacatcgaatctgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0200700, RefSeq:Os03g0200700