Os03g0201400

From RiceWiki
Revision as of 12:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0201400| Description = Glycoside hydrolase, family 10 protein| Version = NM_001186374.1 GI:297721878 GeneID:9271490| Length = 3867 bp| Def...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0201400

Description

Glycoside hydrolase, family 10 protein

Version

NM_001186374.1 GI:297721878 GeneID:9271490

Length

3867 bp

Definition

Oryza sativa Japonica Group Os03g0201400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5344551..5348417

Sequence Coding Region

5346965..5347984

Expression

GEO Profiles:Os03g0201400

Genome Context

<gbrowseImage1> name=NC_008396:5344551..5348417 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:5344551..5348417 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcggcgagatcctgcgcaacccgtcgtaccagcggtggttcgcgtcgcggttcacggtgaccacgttcgagaacgagatgaagtggtacagcacggagccggcgccggggagggaggactactcggtgccggacgcgatgctggagttcgccaggagccacggcatcgcggtgcgcgggcacaacgtgttctgggacgacccgaaccagcagccgcggtgggtgcaggggctcccctacccgcagctgctggcggcggcgtcgcggcggatccggtcggtggtggcgaggtacgccgggaagctcatcgcgtgggacgtggtgaacgagaacctgcacttctccttcttcgagcgccgcttcgggtgggacgcttccacggcgttctacgcggcggcgcggatgctggacaccgggtcgacgctcatgttcatgaacgagtacaacacgctggagcagccgggcgacatggcggcgctgccggcgaggtacgtgcagcggctgaagcagatcatcggcgggtacccgcagaacggcgccggcatggccatcggcctcgagggccacttcaccgcgccggtcaacatcccctacatgcgcgccgccctggacaccctcgcgcaggccggcgtccccgtgtggctcaccgaggtcgacgtcggcggcggcgcgtcgcaggcgtactacctggaggagatcctccgggaggcgtacgcgcacccggcggtgcagggcgtcatcctgtgggcggcgtggcggccgcagggctgctacgtcatgtgcctcaccgacaacgacttcaacaacctgccgcagggcgacgtcgtcgaccgcctcatcaccgagtggagcacggcgccgcgcgccggcacgacggacgccgagggcttcttccaggccgagctcgcgcacggcgagtacaaggtcaccgtcacccacccgtcgctcaacacctccgtgtcgcagagcgtcaaggttgaaatgggatcagggagccactacttcatccaggtctaa</cdnaseq>

Protein Sequence

<aaseq>MSGEILRNPSYQRWFASRFTVTTFENEMKWYSTEPAPGREDYSV PDAMLEFARSHGIAVRGHNVFWDDPNQQPRWVQGLPYPQLLAAASRRIRSVVARYAGK LIAWDVVNENLHFSFFERRFGWDASTAFYAAARMLDTGSTLMFMNEYNTLEQPGDMAA LPARYVQRLKQIIGGYPQNGAGMAIGLEGHFTAPVNIPYMRAALDTLAQAGVPVWLTE VDVGGGASQAYYLEEILREAYAHPAVQGVILWAAWRPQGCYVMCLTDNDFNNLPQGDV VDRLITEWSTAPRAGTTDAEGFFQAELAHGEYKVTVTHPSLNTSVSQSVKVEMGSGSH YFIQV</aaseq>

Gene Sequence

<dnaseqindica>2415..3434#agtccaacgtaggaagagcagatgcatatatggtctcttcatctcctcgacctagctagctgcttctgttaactactgagaggagttagcaagctatagctaatcaagagtgtgctggttttgttcgattctgcagggtaatgtgctgctaatgtaatcagtttaagatgctcacatgatgcaccaagacatgacctaagctagctacctttgttgctttgcattctgccgttattttcggcaacttattgacgtggattattaattgcatagaattgtttaagaagttgtgttgttgatgcttaccctgcagtgtcctgggagagacgatagatatgaaggttgatccgatggggaaactgttgttcttgcttgcatggattactctcttgcaaggtaataataccagttcttttaactattcctttgccctgtttaattagcttgcaagtgcagtatcatgtcacaccaattgtagaggttttcatatatgctttggaactttactgagcgtcacggtcatgtacttaaattattatatatcactatactctgttgtaaatcgttactgagatatataaattaagctacttctgaatttgtctgcaggttgctgcatggtgaaatccttttcttacgactactcatcaagcattgaggcaagtcgttctctaatatgatctgtaactgttagtcgtagtacacactgtacactagctagtacttcatctgctacatgttatcgacgaatgtatcgttggccggcctaaggcatcgacagaaattaattatattcctgcttagattagcgagcaattaatctcgcgattaacaattaaaagctagctcgattgggatgacaatagctatatcacgggcgggagtggcggcgcgatatgttaattattacgattatcggcctcacgcaatgcgtttccggtgcgagttagcatggaatttctttcttaatttgcccgtacgtacactatatgcttttcagtaccatgcacgatagcggcggcggcggccggcgcagcgtgtcatgtaagctagctccaaacaaaatgcacacatcattaatcatttatcattatttggtttttttgactataatatatactctctcattccctaaatgtttgacgctgttgacttttttaaacatgtttgaccattcgtcttatttaaaaacttttataaaaatatgtaaaactatatgtatacataaaattatatttaacaatgaattaaatgataggaaaaaaataataattacttaaattttttgaataagacgaacggtcaaacatgtttaaaaaaatcaacggcgtcaaacatttaggaatggaggaagtatatatcaatatatgtagttatatgcaccttttctctttggtccattcttgtgctcttcatcattttattttcttattgtcattagtttgatgatcacgtttaggtatgcttcagatgtgtctgcagagcaagcaaagcatctctatgttgccgagattagagcagcatgcacttttatgcatgcttagacaaattaataaagttaattaattaattatggcgtctgagtgtgtgggcttgttcggtacagtgcttgcctgagccgccggagccccagtacggcggcggcgtcgtccggaacgccgacttcagcgctggcctccatggctggtcggccttcgggtacggcagcctcgccgagggctcgtcgccggcggggaacaggtacgccgtggcgacgaaccggacgcggccgtaccagagcgtcagccagaaggtcctcctccagaacgacacgcactacaccctctcaggtctggtggtcaagaaatcgaacgtgtgaaattaatgtgtagccgtcacgtctcactttgtggttttccatgtgcatgcaatttgggactgagacgtcgcgtactacgtgcgtgtgcggtgcagcgtggttgcaggtgagcgacggtgtcgccgacgtgcgggtggtcgtcaaggccgccggcgacttcatccacgccggcggcgtcgccgccaagtccggctgctggtccatgctcaagggcggcctcaccaccgtctccggcggccgcgccgagatctacttcgaggtaactaattaatcactttcactccgagttgatttaattctttgcaaatactacggagtacatgcgaacgtgacgcgtgcttgcgtgcagagcaacgcgacggcggacatatgggtggacagcgtgtcgctgaagccgttcaccaaggaggagtggagcaaccaccgcgacgcgtcggcgagcacggcgaggaggaagacggtgaggctccaggcgacggactccgccgggaacccgctgccgggcgccgccgtgtcgctggagaacgtccgcaacggcttccccctcggcgccgccatgagcggcgagatcctgcgcaacccgtcgtaccagcggtggttcgcgtcgcggttcacggtgaccacgttcgagaacgagatgaagtggtacagcacggagccggcgccggggagggaggactactcggtgccggacgcgatgctggagttcgccaggagccacggcatcgcggtgcgcgggcacaacgtgttctgggacgacccgaaccagcagccgcggtgggtgcaggggctcccctacccgcagctgctggcggcggcgtcgcggcggatccggtcggtggtggcgaggtacgccgggaagctcatcgcgtgggacgtggtgaacgagaacctgcacttctccttcttcgagcgccgcttcgggtgggacgcttccacggcgttctacgcggcggcgcggatgctggacaccgggtcgacgctcatgttcatgaacgagtacaacacgctggagcagccgggcgacatggcggcgctgccggcgaggtacgtgcagcggctgaagcagatcatcggcgggtacccgcagaacggcgccggcatggccatcggcctcgagggccacttcaccgcgccggtcaacatcccctacatgcgcgccgccctggacaccctcgcgcaggccggcgtccccgtgtggctcaccgaggtcgacgtcggcggcggcgcgtcgcaggcgtactacctggaggagatcctccgggaggcgtacgcgcacccggcggtgcagggcgtcatcctgtgggcggcgtggcggccgcagggctgctacgtcatgtgcctcaccgacaacgacttcaacaacctgccgcagggcgacgtcgtcgaccgcctcatcaccgagtggagcacggcgccgcgcgccggcacgacggacgccgagggcttcttccaggccgagctcgcgcacggcgagtacaaggtcaccgtcacccacccgtcgctcaacacctccgtgtcgcagagcgtcaaggttgaaatgggatcagggagccactacttcatccaggtctaagctctagctcatcactcatcagctagacagctacccgatgatttcattcagggctttggaaatgatcatactggtcattcatgcccgttagctgtatctcttcatagtatcaagatgcatgtgtagtcgaaattctgcagcttaaatagcctaatagtacccatattagccattcatgattcatgtaccaattttactctgaaaaattgcagctgaattgaaatggagctacacaaaagggaaaaatatagcctaatagtacccatattagccattatgctaaacttttggagtctcttgtactcatttccagttattctttctttctcgctgaaggatttcagcaggtttgctgtagcttggacggccgatccttttcccatggccattagcgtatgattgtttttctatcgagatgacatcatctccggtc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0201400, RefSeq:Os03g0201400