Os03g0201600

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Revision as of 12:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0201600| Description = RNA-binding protein, YrdC family protein| Version = NM_001055833.1 GI:115451394 GeneID:4331975| Length = 3185 bp| D...")
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Gene Name

Os03g0201600

Description

RNA-binding protein, YrdC family protein

Version

NM_001055833.1 GI:115451394 GeneID:4331975

Length

3185 bp

Definition

Oryza sativa Japonica Group Os03g0201600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5348121..5351305

Sequence Coding Region

5348959..5349016,5349142..5349433,5349529..5349730

Expression

GEO Profiles:Os03g0201600

Genome Context

<gbrowseImage1> name=NC_008396:5348121..5351305 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:5348121..5351305 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aatgggtctctcaatcttcatgacagctctgcagaagcagttaatcgtatatatgagatcaaaggacgcgtacagacacggcctcttgcaatctgtgttgctgatgtcccagacatatcacggtttgctgttgtggatcacctacctcatggcctgcttgatagtctacttcctgggcctgtcacagttgttttaaaacgaggtaacaacagtatattggagagatctcttaatcctggtttggaaagcattggagttcgtgtgccagattttgatttcattcgagccatttcccgtggtgctggaagtgcgcttgcacttacaagcgccaacttaagcgggcatcctagtagtgtcaacgtcaaagattttgaggatctgtggccacattgttcatatgtctttgatggtggaatcctcccttctgggcgtgctggttcaacaattgtggacctaataacaccaggagtctacaagatattgagagatggaagttcaaggcaggaaacgacagcggtgctcggcaagtttggctttgttgaagcttggtga</cdnaseq>

Protein Sequence

<aaseq>NGSLNLHDSSAEAVNRIYEIKGRVQTRPLAICVADVPDISRFAV VDHLPHGLLDSLLPGPVTVVLKRGNNSILERSLNPGLESIGVRVPDFDFIRAISRGAG SALALTSANLSGHPSSVNVKDFEDLWPHCSYVFDGGILPSGRAGSTIVDLITPGVYKI LRDGSSRQETTAVLGKFGFVEAW</aaseq>

Gene Sequence

<dnaseqindica>2290..2347#1873..2164#1576..1777#agtggtttgactagtcctctctctccgggagaaattttgctccggccgcctcggcgtcgcgctccgcggctcgtaatctttcgcggtggccggcggcgggggagaggaggaggaggaggaggagggagatgaaggcgtgcgcgagggcagcgggggagaggctccccctggtcggtgctcccgccaggcaacccctggctcggaggtatcccctcttcgttactctgggttcttgtttgctcgctccctagaaatatactaagctttcgtttgttcaaacatcttttatttatttgtgaaaaaggctagaatttgcacttctcatgctagtaattctaattctagaatcttgacattgttccacggacgttgaattactggctactacttatttacttcgcccaaacgacttgtgtttgtactcttgtttttcatccaattcattcaaaaggagatagtgtttgtatatttaattgaattatcttgtataataccttttcatgtgggataatccccgcgaattgtcttttaatactaatggtaagaagtgaacatctaggatgttttgatgattgaatttgctataatcagagtaccgacttcacaatgctacttactgtaaattgtatctgcacataagattttttatttttcttcaacaaatttggggctttcttggtttgctaaggactgtggtgcaatagtaatgaggaactttggggtttatacacaaattccatccgtggttctcccaaatttttcatatatatgttaatgcaattgagtgatgctctcaatttgacatggttccttgagacttgatgtatatattatcttgttcagcacacttgttaattgctatgtaaaatttcatactgtatggaaatctcttttggcacatgggagaactgtgtatttctttggttaaaatgtttattcagattactgcactgacacacttgtttttctcagttttgttaaggtcaacagattatcatctcaacatgagacgaagtctgtggtatcctgctcggtaagggtgtcagatgacaagacacaccgaatagaagccacggcagaacacatccttccagcaacaaatgatcatgtcatgaaagcaattgactcaattaacagggggcaagtgattgcggtgcccaccgatacgatttatggctttgcttgtgatgcatggttagttttactaaaagtacattttgtgccaagaattttattcttctcatttgctttgttgtcctattgttctcatgttaactccaatttaacaccttctgcaatgatgtgagtagatgtctaacaaggccaacccctgaaaagaaactctgatcagtaaatccagattctagttatgaggagtttgtgtgctcatatctaaattagtcatgtacaaaaaatattcacaaacagttcagaaactttcattagttactattgaatctcactttcatttagatttggaagcaatgtttcgtgactttgttcattttaagctaggtttacttttttggagattctctgactggttggctgcattcatccattggttatttttaaaatgggtctctcaatcttcatgacagctctgcagaagcagttaatcgtatatatgagatcaaaggacgcgtacagacacggcctcttgcaatctgtgttgctgatgtcccagacatatcacggtttgctgttgtggatcacctacctcatggcctgcttgatagtctacttcctgggcctgtcacagttgttttaaaacgaggtgtggacaccagcctatgcttcaaaacttctatcttgcacctttcttaagcagcataatgtgtctaataaaactcttcattcatttacatttaggtaacaacagtatattggagagatctcttaatcctggtttggaaagcattggagttcgtgtgccagattttgatttcattcgagccatttcccgtggtgctggaagtgcgcttgcacttacaagcgccaacttaagcgggcatcctagtagtgtcaacgtcaaagattttgaggatctgtggccacattgttcatatgtctttgatggtggaatcctcccttctgggcgtgctggttcaacaattgtggacctaataacaccaggagtctacaagatattgagagatggaaggtaagagcaataacagtgatgccaattattcaaaactccgtttgaatcccttggaaaatcgagagatgggtctgtttttttacacaatgtactgatgggatgttttacacattattcaaatgcagttcaaggcaggaaacgacagcggtgctcggcaagtttggctttgttgaagcttggtgacaacttgttgacctcataaaattggtaccatcaaatactagtccctttgttatctatctggcttcttgcttagttaggtgctgtaccagaatataggttgttgtttgtgcttttctttttcatattctgaatcagaaggtgtcagcttcctgtttcaatgtcaatgcccttacagtatcacgtgaacttcgattgctacactacagttcattctatggtagattacactagcatgcctatgcaagctaaaagaaatattgattgtaatggattttaatataaaaatcactagattatctccagtatatattgtgtttacgtcatgtctcccgtagttgtggtgtgtggattgaacgcgacatggcaactcagtttggaagtttgggtgtgctgtgccttttgttttgtccgtgttctgctcgtgacttcgcttgtttgcttccggatgacatcatttttctattttttttataggatcatgattcaatttgaaatagtatactctttgttggtgattaaatgtaacagaagtcagaatcatgaccggagatgatgtcatctcgatagaaaaacaatcatacgctaatggccatgggaaaaggatcggccgtccaagctacagcaaacctgctgaaatccttcagcgagaaagaaagaataactggaaatgagtacaagagactccaaaagtttagcataatggctaatatgggtactattaggctatatttttcccttttgtgtagctccatttcaattcagctgcaatttttcagagtaaaattggtacatgaatcatgaatggctaatatgggtactattaggctatttaagctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0201600, RefSeq:Os03g0201600