Os02g0535400

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Annotated Information

Function

The gene locus Os02g0535400 is a gene called Os RAR1(NCBI Gene ID: 4329567) and this gene codes a protein called Cysteine and histidine-rich domain-containing protein RAR1( NCBI ACCESSION:Q6EPW7). RAR1 is an important component in innate immunity in Rice. RAR1 is required for basal resistance against compatible races of rice blast and bacterial blight and this resistance is mediated by Os Rac1

Expression

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Evolution

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Labs working on this gene

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Structured Information

Gene Name	Os02g0535400
Description	Conserved hypothetical protein
Version	NM_001053574.1 GI:115446518 GeneID:4329567
Length	2767 bp
Definition	Oryza sativa Japonica Group Os02g0535400, complete gene.
Source	Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome	Chromosome 2
Location	Chromosome 2:20584982..20587748
Sequence Coding Region	20586274..20586295,20587512..20587747
Expression	GEO Profiles:Os02g0535400
Genome Context	<gbrowseImage1> name=NC_008395:20584982..20587748 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>
Gene Structure	<gbrowseImage2> name=NC_008395:20584982..20587748 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>
Coding Sequence	<cdnaseq>gtagagactagagaggccacaggcggcggcggcagcagcggaagtctctcgtctcgtccgtggagaaagggggaagacgaagatgtcgacggaggcggagaccaccagcgccgccgcccccgcccccgcccccgcccccgcatcggcgccggcgcggtgccagcggataggctgcgacgccacgttcaccgacgacaacaaccccgacggctcctgccaataccacccctccgtgacctatgtttcatgatggcatga</cdnaseq>
Protein Sequence	<aaseq>VETREATGGGGSSGSLSSRPWRKGEDEDVDGGGDHQRRRPRPRP RPRIGAGAVPADRLRRHVHRRQQPRRLLPIPPLRDLCFMMA</aaseq>
Gene Sequence	<dnaseqindica>1454..1475#2..237#agtagagactagagaggccacaggcggcggcggcagcagcggaagtctctcgtctcgtccgtggagaaagggggaagacgaagatgtcgacggaggcggagaccaccagcgccgccgcccccgcccccgcccccgcccccgcatcggcgccggcgcggtgccagcggataggctgcgacgccacgttcaccgacgacaacaaccccgacggctcctgccaataccacccctccgtgagtcctcctcctccccttcttccccttctaaatctcatggggtctaactaattgccccgcggattacgggagtggaggagtctgttcttctagggggaagttgggcagttcgaatctgtaatggcggggtcaagggcttcgcctgctcttgggaaacttctggggacgaattgggcagcggggaatatttgagttctatatacaataatgaaatttagtgtcatatagagatatgttggactacactcattactcatagtagattagtggattggattgcacgattatactcatagtagattagtagattagtggattggattacacgattcaatcagaagggttattgatgccattggcaaaaggtattgtagttgtcgcaaacacgtgatattaggtggttttttttttgccccttatttgggttaggatattggtaccttgaagctgcctcttgatgaggcatcatgggcaatgtgtctgatgtgtggcgagggatttttttcccctttggatatggctcacatgagtgctgactatttacaaaaagcaaaaggaaaagaggcaaagaactacctttcccttcagagagtaaacaaaattaatttggaataaagatatgacattctctttctctttctctttttcaatccctaccgtgtctaagggtcagatacccatgttgtaccaaaaaaggattaagtacacaaacagctgctgcaaaacttcttcacaacttcttctatttccaattgtgaatatctcttgataacaatggaagaaataatggttaattttttcaagcaattcttttcttttgtctccaaagattcaaatcacattgctaactttgtgatgccatgccaaattccattgtaatatttaaacaccaaattcacactcatgtttactgcatttggtctagaagaaatacacaacagctagtataagagaatacctaaatgtggtcccattcttttttggaaaatgacgaataaagcaacatatttaaacaagactcgtataatatgtttgctaactctctttatggtttcttgtctactgccaaatactatatttatttccaattttccactgtagtgttctgaccactgtctccttttttttttcttgcagggagtaagtgtttcttctttgcatgagagggtacttctagaaggatgcataggttaattttctaagattttttttttcagcctatgtttcatgatggcatgaaacagtggagttgctgtaagcaaaaaagccatgattttagcctatttttggctattcctgggtaaggatccctctctagtatttccttttcacagcatgcacccacaacataagtcaactatgtgctatcaacctgaacattaccatctgggctggcctgttgtgtattttagcaaaaccaagcatgaatgcatgaatcgtatgctgtactgctgtgtaggtgcaaaactggaaagcacacaactgagaaaccaatcacaaaagcagttcctactaaaccatcaaaggcagttccagtccagacttcgaagcagagtgtgggagctgacacttgctcaaggtgccgtcaaggtttcttttgctctgaccatggtgagtttctgtctataagcataatgcttggatacaactgattgatcccctatttgggtgtaacagctgattgtttcgttattattttaacgactgacatccctatgcatttttatgtgttgatagaataaatcgtaacttttaatttaacagattatgcactgctattttttcaggatcacaacccaaggcacaaataccaaccgctaccagtgatactaacatggtacctgttgagaagcctgcagttccaccaccaaagaaaaaaattgatctgaatgagcctagggtttgtaagaacaaaggatgtggtaaaacctacaaggagaaggataatcatgatgaagcatgcgattaccatccaggacctgcagtttttcgcgacaggattagaggggtatgtttttggttcaaacttattgttgttttgctctattccttgatttttgccatcactgactctgacatctttttaaaaatttttgcagtggaaatgttgtgatattcatgtcaaggaatttgatgaatttatggagatccctccgtgcacaaagggttggcacaatgctgatgccgcatgaattttcaccatgccccatcttggaataagaaccctattagcataaggttctcttgtatctcgtagtgcataaggtgcaatttttatggagaattttacttggagttggggagtgtggcaaagataccgagaataggctgttttaccgtgctctgtgtgactgctgcaaaagtgtgcgtggtgtttcattttttgtctgaaacggggacttgaaattgtgtgtggagacttcggtctcgttcgttggctcgttgccaattcttcatagttagaaaatcaaatgctccatctaaatgctatcctgcagacttttggtaacacccatctttctgtttatatg</dnaseqindica>
External Link(s)	NCBI Gene:Os02g0535400, RefSeq:Os02g0535400