Os03g0202200

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Revision as of 12:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0202200| Description = Porin-like protein| Version = NM_001055836.1 GI:115451400 GeneID:4331978| Length = 3639 bp| Definition = Oryza sati...")
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Gene Name

Os03g0202200

Description

Porin-like protein

Version

NM_001055836.1 GI:115451400 GeneID:4331978

Length

3639 bp

Definition

Oryza sativa Japonica Group Os03g0202200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5375649..5379287

Sequence Coding Region

5375952..5376258,5376337..5376545,5376613..5376699,5376785..5376895,5378922..5378989
,5379109..5379160

Expression

GEO Profiles:Os03g0202200

Genome Context

<gbrowseImage1> name=NC_008396:5375649..5379287 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:5375649..5379287 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatgaagggacccggcctcttctccgacattggcaagagggccaaggatctgctcaccaaggactacacctatgaccagaagctgaccgtctccaccgtcagctcctccggagtgggcctcacttccacagctgtgaagaaaggggggctttatactcttgatgtcagctcagtttacaagtacaagagtactctcgtcgatgtcaaagtggacacagaatctaatatctctactactttgactgtgtttgatgtccttccatccacaaagcttgtgacaagtgtcaagctgcctgactacaattctggaaaggtggagatgcaatacttccatgagaatgcaagttttgccactgctgttggcatgaagccatctcctgtggttgaattttctggaacagctggtgctcaaggacttgcctttggtgcagaagctgggtttgacactgctacaggaaaatttaccaagtacagtgctgcgataggtgtaaccaagccagattatcatgctgcaatcgttctggcggacaaaggtgacaccgttaaagtgtcaggtgtatatcaccttgatgataagcagaaatcctctgttgttgctgaattaacccgcaggctctcaacaaatgagaacactctcactgttggtggcctgtacaaggttgaccccgagacagctgtgaaggcaaggctcaacaacactggaaagcttgctgctcttctccagcatgaggttaaacccaagtcggttttgacaatctctggtgaattcgacaccaaggccttggacagaccccccaagtttggtctagcgcttgcactcaggccctga</cdnaseq>

Protein Sequence

<aaseq>MAMKGPGLFSDIGKRAKDLLTKDYTYDQKLTVSTVSSSGVGLTS TAVKKGGLYTLDVSSVYKYKSTLVDVKVDTESNISTTLTVFDVLPSTKLVTSVKLPDY NSGKVEMQYFHENASFATAVGMKPSPVVEFSGTAGAQGLAFGAEAGFDTATGKFTKYS AAIGVTKPDYHAAIVLADKGDTVKVSGVYHLDDKQKSSVVAELTRRLSTNENTLTVGG LYKVDPETAVKARLNNTGKLAALLQHEVKPKSVLTISGEFDTKALDRPPKFGLALALR P</aaseq>

Gene Sequence

<dnaseqindica>3030..3336#2743..2951#2589..2675#2393..2503#299..366#128..179#atttctcgtggcgccccaccattcccttctactagtggcggaacctctctgacctctcctttctctctccctcctcttcggcggccgcctcccccctcccccccttccccaagccgccgccgccgccatggccatgaagggacccggcctcttctccgacattggcaagagggccaagggtaacccgcatcttacccctcctcccatctcatcctctctctcgctcgctcgctcgctttccgttccctaattcgtttgttttcgtttctcgttgttgttggggtttggtgatctgcagatctgctcaccaaggactacacctatgaccagaagctgaccgtctccaccgtcagctcctccggagtggtaagggttccccatccgatccgatcgcgctcgtgtgatctggcgctgagttccgtgttgcgcttgttcgtggttgacccgcgagctttgccatctagtcgtggttgtggttgtgcgtagtcttgatttgttgacgggtaggatgcgtgctgtagtcatgggctcatggcctgtttaattgctgctatttaggtttcgggtttgtcaggtctttccgtggctgcaattcctcggcgtgtttgctgttttttcatgtgaatggatgtagtgctaatgcccgttagctgcgtgatagcctgataggaaatgggaaatcgttcattttgtagagcaattcagtgacttgtatatttgagggaattaattgggggagctagatcgtataaagttcaattctgctacaggaggtagtgtagtcagcaccggtgttcgaggcgctgctgctcccctcctgactcaatgaagattctgcatgtgtctgaagcaatagagatatcattgggggtttgtctatgatgaacagttacgaagtataaatgcttgatctgtaatatgacatcttggtggcagtgtcgttagaacttttagtatttctgtaggagtgtgtaggctgtgattggagtaataggagaaacataagttgtagctacgatttggagaaactagagagttgaagttatggttagccacctgtatcattgccaaccagtactcttggaaacattgaatgtgtaaaatgttatcatgatttgtttccgccacagcaatttttgtttggttattcctcatttccacttaccattgttgccaaactcatctgtatcagtggaccagtacaaacactcttctggtatgatatagacatatagtaaaacataagaagtgtttctacttgctagttgatatattctgatattcaaggttgaatataacagttctgcacaatgcgtttgcttttcttcttttattttagaacttcatttcttatattgccgttttgaaggattctggttgtagttgcaggcttcttctaggatgggttataaattgcaatcactagatgctttcattggatgtatcaatgtaacaaataacaaattatgtaactgcagttgtccttctagtgttcatttgcgctagcatttcttttcaagcatatggctgctatgaggatctggatttattattttaggtcatgttgtgcttaccatgttatactaccaagatccttccgctctcatgagatgtgatattactgagtttccattctttaagcctatccttccactctcatgagatgtgatattactgagtttccattctttaagcctatctaaataaattcctcccccaaaaaataaggtagctatatattcattctgtttatgcaacagttgactagctggattgtgctatcacacatgcatattctgttcagtatgaaatgcttgttgaattgaaaaaggtttacttctccagttcttccttttattttcaagtaattaaggctgttaagaatatatcaatgcaaattggtggtgatagggtaaatattgtaaaaacctgccaaccatagtcccttctctcctgatagaaactatacatcctataattttatctgggtgcattgaaatagacactgttaactggaaaaaatgaatttcatatttgattttggaatatagatgagttacattccatacatacatgcatgtatgatgctattacttgttgtgggcttgaagctacgacaagcattgcatttaactcctttgcatatggtgctgtgtaaattacttctcatataattttttgcccccatgtgcccatccaccattttcatacaatgaatggtcaacatacacaatgaccattgttgcaaaattttgtcacatgtataatgatcttacttgctatgataatactgccctatcttttcagtaatattaacttattatgtatgcttgtttgccctttataaacttgcatgctgtggttctcatgtattttgtcctttatttgtcagggcctcacttccacagctgtgaagaaaggggggctttatactcttgatgtcagctcagtttacaagtacaagagtactctcgtcgatgtcaaagtggacacagaatctaatgttcgtgatatggaatactcagatttatattttttcctctccataacatctgtctagctgtaacacaaatatatgatttctgcagatctctactactttgactgtgtttgatgtccttccatccacaaagcttgtgacaagtgtcaagctgcctgactacaattctggaaaggtaattttatcgtgtcaagttatgtttttaaattgaaaacgatccatagctgagttttcaatgacaggtggagatgcaatacttccatgagaatgcaagttttgccactgctgttggcatgaagccatctcctgtggttgaattttctggaacagctggtgctcaaggacttgcctttggtgcagaagctgggtttgacactgctacaggaaaatttaccaagtacagtgctgcgataggtgtaaccaagccagattatcatgctgcaatcgttctgtaagtacatgcttcattgtaacttgtcatgacctgggttgtaatgttagtactgatacattacacaaacatgtgcagggcggacaaaggtgacaccgttaaagtgtcaggtgtatatcaccttgatgataagcagaaatcctctgttgttgctgaattaacccgcaggctctcaacaaatgagaacactctcactgttggtggcctgtacaaggttgaccccgagacagctgtgaaggcaaggctcaacaacactggaaagcttgctgctcttctccagcatgaggttaaacccaagtcggttttgacaatctctggtgaattcgacaccaaggccttggacagaccccccaagtttggtctagcgcttgcactcaggccctgataacatcgtctgtggttgatggctgttaaatttcgaattctttggttgttttgcaaagcaatggccaataatttgttccgcagacctgttacttcaatcttttaaagttttgctgctctgtgggcaggagccaatgggtgttttacatgattttatccgctacttctgttgatgaaagcatctagtcattgttagatgtatgctgttttcctctctttcttagcttaaagctcactttctatgtactactgaggtgccatgccaccagtagtctatattgatattccttgcacaaggtacgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0202200, RefSeq:Os03g0202200