Os03g0202300

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Revision as of 12:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0202300| Description = Conserved hypothetical protein 48 family protein| Version = NM_001055837.1 GI:115451402 GeneID:4331979| Length = 434...")
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Gene Name

Os03g0202300

Description

Conserved hypothetical protein 48 family protein

Version

NM_001055837.1 GI:115451402 GeneID:4331979

Length

4340 bp

Definition

Oryza sativa Japonica Group Os03g0202300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5380280..5384619

Sequence Coding Region

5380562..5380804,5381156..5381255,5381348..5381517,5382174..5382278,5382908..5383042
,5383239..5383349,5384113..5384278,5384410..5384546

Expression

GEO Profiles:Os03g0202300

Genome Context

<gbrowseImage1> name=NC_008396:5380280..5384619 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:5380280..5384619 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgtcgtcgtcgtcttcttcgtcgtcgccgccgccgcctccgccgcgccgctccgtgttcgacgccgcctacatccgcgcggagttcgcggcggccggcatctcccctcacttcatccctctcatctggaagtatgtgttgcagaaccccaggtgcggcgacctggacgccgtcccgtcgctcccggcggccgcgtacgcgctccttcggcagaagttccagccgaccacgtcgacgctcaccaccgccgcggagtccaaggaccgcaccactaccaagctccttatccgactcaagaatggggaatctgtagaagcagtgatcatgcggtatgacacgcgattggggaagtatgacgggaagcctcggcctggtggcgtgcgctcaaccctctgtgtctcctcacaggtaggatgcaagatgggctgtagattctgtgctacaggaacgatgggcttcaaaagcaatctgtcttcaggagaaattgtggagcagttggttcatgcatcccgttattctcagattcggaatgttgttttcatgggaatgggggagccattaaacaactatactgctttggttgaagctatccaagtcttgataggctctccattccagctttcacctaagagaattactgtatctactgttgggattatccattccatcaataagttcaataatgatcttcccaatataaatctagctgtgtccttgcacgctcctgaccaagacatacgctgtcatataatgcctgctgcccgggcctttcctttagtaaagctaatgaatgcactgcaatcatatcaaaatgagagcaagcagaccatctttattgagtacatcatgcttgatggagttaacgatcaggagcagcatgcccaccagcttggtaaattacttgaaatgtttaaagcggttgttaatctgataccattcaatcccattggctcatcaaacaatttcaagactagcagcgaacataatgtgaagaagttccagaagatcctaagaggaatttacaacatcagaaccactattcgccagcaaatgggtcaagacatagctggcgcctgtggccagctagtggttagcctccccgatgaaagatcagcgggtggtgccacccttctctcagacattgaagacatcaggatctga</cdnaseq>

Protein Sequence

<aaseq>MASSSSSSSSSPPPPPPRRSVFDAAYIRAEFAAAGISPHFIPLI WKYVLQNPRCGDLDAVPSLPAAAYALLRQKFQPTTSTLTTAAESKDRTTTKLLIRLKN GESVEAVIMRYDTRLGKYDGKPRPGGVRSTLCVSSQVGCKMGCRFCATGTMGFKSNLS SGEIVEQLVHASRYSQIRNVVFMGMGEPLNNYTALVEAIQVLIGSPFQLSPKRITVST VGIIHSINKFNNDLPNINLAVSLHAPDQDIRCHIMPAARAFPLVKLMNALQSYQNESK QTIFIEYIMLDGVNDQEQHAHQLGKLLEMFKAVVNLIPFNPIGSSNNFKTSSEHNVKK FQKILRGIYNIRTTIRQQMGQDIAGACGQLVVSLPDERSAGGATLLSDIEDIRI</aaseq>

Gene Sequence

<dnaseqindica>3816..4058#3365..3464#3103..3272#2342..2446#1578..1712#1271..1381#342..507#74..210#gtccgccccagccttccaagttccaacccccccgccgcatcccctccccccactccactcctcccgaatcccaatggcgtcgtcgtcgtcgtcttcttcgtcgtcgccgccgccgcctccgccgcgccgctccgtgttcgacgccgcctacatccgcgcggagttcgcggcggccggcatctcccctcacttcatccctctcatctggaagtacgcgcccttccgccgcccccctcgaaccctacgcgctcgccgtctctgtgcctctcgatttttttttgtcatccgagagatagaaacctcgtcttggtctgaaggggtgatttcctcttcgcgtgcaggtatgtgttgcagaaccccaggtgcggcgacctggacgccgtcccgtcgctcccggcggccgcgtacgcgctccttcggcagaagttccagccgaccacgtcgacgctcaccaccgccgcggagtccaaggaccgcaccactaccaagctccttatccgactcaaggtgaattgaattagattgtgccactttcgtgctgtatgctcaaacttgggggattttgtagattgcacatttcggtggtttgaacatgcagtactaatggtgattatgggatcaggagaagtctgcaagatgttttagggtttgtaatttttttaccgctgttaacctgctagcacttatcacctaatagcatcgatgtatgtgggcagtttgctctgggtatttccgaaacgtccgctctattgattttaaatccatttgaatgcatgtggatatgaacagaaggcctcacgcatacttgcacaattggcacgccactcttttagggactgaatttaaatgagtatctcaagtaagctgtacattagaaacgaaggatttggtctagcatgtgttttcacttttatctctcccttgggaagccatttatagtttcctaggttatcattgcgctctcgatgcaaagcttggaagattcaatgtaagggttatgacctaatgagttcgtgtcctgtattaggtaggttattttcaaattttaatccaaccataaattaaactctgagtatattttgcagctccagtttgacttgaacttggttactcttttgtctgataacaaacatgtaaatgcatgtcaagttgtcaactgtcagttgcccttccgtttggttgttgtcttgttactgctgttgtctgatttttttttcgttgatccttttctgctaatatcaacttattcctcttcaatttcatgacctagaatggggaatctgtagaagcagtgatcatgcggtatgacacgcgattggggaagtatgacgggaagcctcggcctggtggcgtgcgctcaaccctctgtgtctcctcacaggtagatatatctgccttgcacattgggtggcaagttgttttgtgaaaatcattctttaatgtcttcatgtattgccaatatttcttctgatgacctgtcgtcctgtgggcaactatatttgtgacaacgtaagttatccttgggaagctggtggcttacttgatagacactgaccttgcatctaaaattaacacaggtaggatgcaagatgggctgtagattctgtgctacaggaacgatgggcttcaaaagcaatctgtcttcaggagaaattgtggagcagttggttcatgcatcccgttattctcagattcggaatgttgttttcatggtaatataaaatttcaagctgttggaatttgcctgaattttcttttcaaaaggaaatcgtgcacagtccactggatgtgcaaaaaggcaacaatgagtgccatcatgttttcatcatccagacctagtggcctcacactgttcattcagttgtttgcttggttttatttgtactgcccactggatttcatacaggccatggcaaggcaagccatgctatgcttatgaagtattgcctatgtatatatatatttattctgtactgtttttgctagattttatgtcttccataggaaaaacgggcttgctgtgtgagttttcccactttacttcattaaggtagaaaggatatgtattgtattccattacatgggttagatgcttagatggcttcccatctgagaaattagaaaaccaccacactgcatgaatgcatggtacatcagcttgttttggtgcatatttgtgagtttaaattgttcttattaatgaactgttctcccagttctatagtcatgccattccatttgacagaaattagcagataacaattttgaatttgtgtttttaagaattgcttattggtaccttgcagaggagttttaccttatagttctgctttatatgcagggaatgggggagccattaaacaactatactgctttggttgaagctatccaagtcttgataggctctccattccagctttcacctaagagaattactgtatctactgtgagtataactgcacaagtacctcattttgcatgtggaataattgttcttgagatggctgttggaaggctatcttgtgtttgcatttaaccttttaaaagttcaatttaaccttctgaacaacctagtacttgctcctgtgccatgctaaacacattttggaaaatacggaaaagagtttcaccaactttgcaagtattgcagttggcttttggatattctaaggatatcctgttttaatattgtacaatgcctttctaaatgaataatgaatttcagatgttctatcaggtttctattatcatacatttcttaggaatcaaaaatatatttccacccacctattattgagtcctttctagtatttactcctcagatttacttttcagtatagcatggttcttatcattctgtctggtgaaagctttgctgctgatttacttgatcttttacagttttatgctcgtgttttgacattagtaaatcgttgtgattatgatgcatgtccctatatgatccattaagttgtaaatcctgctaatatttagtttagcaattgaattttccttgggattgatgcagctgaaagattgaacttttgttaggactgaaacagcagtaattgtgactttgaatcttaatattgtgtactgcaggttgggattatccattccatcaataagttcaataatgatcttcccaatataaatctagctgtgtccttgcacgctcctgaccaagacatacgctgtcatataatgcctgctgcccgggcctttcctttagtaaagctaatgaatgcactgcaatcatatcaaaatgagaggtaagaataagattactaaatatcaccatcagtgccaaatataagaaccgatagctttgagtttcaataaacacctgaatgttcgatcacagcaagcagaccatctttattgagtacatcatgcttgatggagttaacgatcaggagcagcatgcccaccagcttggtaaattacttgaaatgtttaaagcggtaagaaactttctgttctttctgcttcatttcatcctgattatcttattaatgattcttttaaatggttggaaaaccttcctgatcatctttgcggtatacttaccctggatgttcaattgtttgatattctaatttctgcccacttgtattatgatttatgacccatggtctttctgttgggtcacggtgtatttgtttggagaatttccttttagtggtttgacttttcatatattaacatcttcagttggtttgcctgttattgtcttcataatatgtgttatatcctcatattggaacctttgaatcaattctctcttgattgcttcctctcttgatcactaacaggttgttaatctgataccattcaatcccattggctcatcaaacaatttcaagactagcagcgaacataatgtgaagaagttccagaagatcctaagaggaatttacaacatcagaaccactattcgccagcaaatgggtcaagacatagctggcgcctgtggccagctagtggttagcctccccgatgaaagatcagcgggtggtgccacccttctctcagacattgaagacatcaggatctgacctcatcaaagatgaaatcctcacaagatacctgtaactagcattatagtttcaatgcaggtttaaaatatggaaagttgattttggccggtgtggtgtgtttcccttcatatttgggaggcacaattttgtttgctacacattggcaaaaggccccagcttttgtgtataggcaactatctacgcgaaagtctgcgcaacaaaccctgttattgtagatggggtaatgttatctcagcaacccatccttgcaatgaactgtgaaaaatcgctttgccttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0202300, RefSeq:Os03g0202300