Os03g0202500

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Revision as of 12:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0202500| Description = Cyclin-like F-box domain containing protein| Version = NM_001055838.1 GI:115451404 GeneID:4331980| Length = 6405 bp|...")
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Gene Name

Os03g0202500

Description

Cyclin-like F-box domain containing protein

Version

NM_001055838.1 GI:115451404 GeneID:4331980

Length

6405 bp

Definition

Oryza sativa Japonica Group Os03g0202500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5400349..5406753

Sequence Coding Region

5400394..5400481,5402865..5402971,5405111..5405929,5406029..5406178,5406269..5406637

Expression

GEO Profiles:Os03g0202500

Genome Context

<gbrowseImage1> name=NC_008396:5400349..5406753 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:5400349..5406753 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaagctgctggacctgaagcggctcatgtccgtgccgaaggagcggaatcgtcgtcggcggcagcggcaaatccgagcccgcaatggttcaattgattcagtggctaaaagaaagggatcactctgccaacaagttgcaaattctgatggcgagagaagaacaagatattcagggcctaaccttccagaggacatctggtgccatatacactccctgatgccattcaaagatgctgcccgtgctgcatgtgtgtctcatgcttttcgtcgttcctggcaacaccgccccaatcttatattttgtattggaacactggggttggatttcatcaacaaaattgatcgtattataaaaaaccactcaggcattggcatcaaatcgctacagttagaatatgatactttttgcaatgctagaaggagcgctagcatcagctatcatctcaataattggcttcagattgctgttacaccatggattgaagaactaatccttacactgtcgctatcttcatacaatgtggattacaatttcccgtgctcacttttatctgatgggagaggaagttcattgcgacatctttatcttggcagttgtttctttcatcctacagttaatcttgaattgagaaacctgacgaggttgcatctggttactgtacatattacaggagatgagtttgggtgccttctttcgaattcttatgctttggagcgattggaacttaaatattgttatggaataatttgtctgaagataccttgcctgttgcaacgccttagccacctggaagtgtttgaatgcagaatgctgcaagccatagagaataaggctccaaatctttgcagttttgaccttggagctaggcaggtacggctcttgcttggtgaatcattgcaaatgaaaacactatccttggactatcctagtgccgtctattatgctcgtgcagagcttccatccaatgtgccaaatcttgaaattctcaccatttgctcggatcacgagatggttgatacaccaatgttgcctagcaaatttttctatctcaagtgcttgactattgatcttgcttggagactttccccagcctatgattatttctctctgatttcttttcttgacgcttctccttccttggagactttttgtctagaggaccgaatggagaatgaattgattattggagatatgtcacatatgaggcaaatgctagaacaccgtcatgacaacctccagagcgtggagattattggcttttgctatacaaagagcttgatcgagctaacatgtcatattcttgacaatacaacgtcgcttaagcaccttaaactggatactactcgtgatgtttttagctgttctacaggcaaacacgacaaatgcttccatatgggtaaggatatgctcaccgaagccaagaaagcagttttggcaattgaaacttacatcgagccaaaagttccctccactgtcatgctaaatgttgtgaaaccttgcaaccgttgccatgttgctgaatcttag</cdnaseq>

Protein Sequence

<aaseq>MGKLLDLKRLMSVPKERNRRRRQRQIRARNGSIDSVAKRKGSLC QQVANSDGERRTRYSGPNLPEDIWCHIHSLMPFKDAARAACVSHAFRRSWQHRPNLIF CIGTLGLDFINKIDRIIKNHSGIGIKSLQLEYDTFCNARRSASISYHLNNWLQIAVTP WIEELILTLSLSSYNVDYNFPCSLLSDGRGSSLRHLYLGSCFFHPTVNLELRNLTRLH LVTVHITGDEFGCLLSNSYALERLELKYCYGIICLKIPCLLQRLSHLEVFECRMLQAI ENKAPNLCSFDLGARQVRLLLGESLQMKTLSLDYPSAVYYARAELPSNVPNLEILTIC SDHEMVDTPMLPSKFFYLKCLTIDLAWRLSPAYDYFSLISFLDASPSLETFCLEDRME NELIIGDMSHMRQMLEHRHDNLQSVEIIGFCYTKSLIELTCHILDNTTSLKHLKLDTT RDVFSCSTGKHDKCFHMGKDMLTEAKKAVLAIETYIEPKVPSTVMLNVVKPCNRCHVA ES</aaseq>

Gene Sequence

<dnaseqindica>46..133#2517..2623#4763..5581#5681..5830#5921..6289#gtcgatttctcgctcgttcgatccgagcggggtatcgtcgtggttatggggaagctgctggacctgaagcggctcatgtccgtgccgaaggagcggaatcgtcgtcggcggcagcggcaaatccgagcccgcagtaaggcctccctcagtcgttctgcctctctagtctggcatctgtaatttgtttagaatatcactgctccttccattgtcttgtgccgttgcacagcactcggcatcgctattttgcaattgggatgcttttcagcaattttttagtgttgtttacagtttatttttcggcatacagattattttggatttaactaaaccaatgagctggatacattaatgttcatttcgattgtcagcatccactaaaaacatagacttcggtatccaaagataacatggaagcccatgcatagtttcggcagtataggggtaaatatcgggtaaacgagtgcaaatgtgcaatgtctcaactgggtagaacatatgaagtgcccatatgtacataccctaaatcttaagaaaatttggtcggccgcttctttggtcagcccagccaaaaagaaaaaaaaaagaaaaagaaggaagaagtagtgcgtgcccataaaactatattgcttccaatataagcaggacccctctaacctatcgtctaaagaggtgtaaaacaaaatatggtagacttgcagtattttcctgttgcaaaaggagatcactccctgctttgaaagcaaataaggttttcggcatagaagcaactactgggaacaccggcttacatagagagctcaaacaacgttctcaccctagccaatggacagcagtccaaaaacaaagaggaaaataactaaaatggtaaactaaaagacaagtgagctgaaaagcaagtttagatcttggttatgaactcatccattttagttatctcctctggtctgaacaacacccaccagaactacacgaagaaaagatttatcaactacgggactgtctggaagcactatctgctgaggcgccgtggccgcgctttgctgcagcaacagcggctgcagaagccaatagaaagcacgctgttcccacaatagattatttttttagggaatacgctagaagcatatctttgtattaagaggaataaaaattatttacaagaaagattgaaggggacggggtactggaatgcaacaaggacttaggctacaatctcacaaccaaattgaacgacctagggaccctagaaactagagaccaagcgccggaatcgccgcctttgccaggcaccacagctctgcctccgcggccatagctcttgcaatttccgcccagggctgccgctggagattgaacaccaggttattcctctctttccagatcatccatgctaccaaggtcgcaatggtgtcgaatccccgacaccgatccttcacgactttcttcctgctaaggcagagccactgatggaaggaggcctcttgcaggggtaggcaatccagttgattgattgccgagagtgcccaccaccagagttgacgggattcagagcagccaaccaagatgtgatctatacaatagattattttatacagcagaaattcaacgttgcagccgaacggctgtgcagttcagctgcagcccaaaccgctgcagtttaggtcttccaacggtcaatatgtcagctgaggaagttattagcaatttctaataagccaagaaagctgtaaacagtacaggatcaaagaatataatgatccacacccccagttcaaccaagaagctaagaattcagaaatatttgtaggaatattcaattttgtgccatggtaacgcctctttcaaacagcaccaagagcaacgagcaatgtgacattgaaagaaaacatggtacacactttctacgcaattgcattggatgcaattaacatcccctttccaattttttttcttcagctgtagatctatcttgataaagaagccaaacggagatttttacttcgagaggaatttcgcatttccacaatctgcacatcctccaactgatgacaccccagagaatgatcctatcatataaagacaaggcttagttattttcagattatttacctgattgttgaaacggattatttgccccacgcttcgaaaaatacattttctcgaaaaactttcttctcttgtattgcttcgaccacttttttaaagttatttgttaagtttatttatcagaatatttaatttatccctataatcaagtagataatcctcatcaataatctgtttcaaaatgaccttagtggtgtagacttgctctttttttttcataataagaaccaatgctcaagggaagtttttttaatggagacaaattggatttaaagtcactagagttttttttttcaaaaaaatcagacaaaaggtaaccaaattgatttgtggtgtgcacttgtgtgcttgatttaattgtttgcttgtatttgtgtctgtacataaccatgcatgatctattgtagatggttcaattgattcagtggctaaaagaaagggatcactctgccaacaagttgcaaattctgatggcgagagaagaacaagatattcagggcctaaccttccagaggtatgacaccaaatgctgataatgaagctcttatattagagtaaggtatctacgagtctatgactgctataagtagcctctaactgcgcactctcgtggtcctatggtacctatatcaaattgtatgaacaggtctttagtgctgcaattttctacagttctgcatgaatagcttttctctattctagctgttacaacttaaccactcccatagaaaattgtctgtgatgggtcttagatccccttgatccttgttgaagcagttgaatttttagagcttccctcccttataatctggttccggtacttgtttttctgtgtattctgtggtctaagatccagtttttcgtcatcatccatcaagtgcatgcctacctggttgagtttaaccaacttccgaagctactagctagtcaaatacgctggtatctatgaaggggccttctattgcttttcaggtcaatatgcattccattattatttgttcactcttgctactcccatattctgagtgctcatgtctactgataatgtggttactgtttccgtttcatccaactccttctcatcttcaaagaaaattatatagtaaatatagttaatcttaacctgttaaccgtaatctaaactgtttgtaccatcaattcataaaccacggagatatgtgaatgtgatgttgaataacctttgcagatagagtagaccaatacagtagcagctccatcatagtttcactccaatcagtaactgtattttttttctcaagcataagaattctgagatcatctttggctccaatgcatgataagctttactttaaccactattaggtcacttgcaagcacttgccttcatactggcccttgcttcctatgaaggtacaatctaataatattagttggtttgtaggttagctataatccaaacctggcaaggcaccaaacaagttctattttcctttattttcgaacaacgcaggagagctgcatgccattccattaagtagaaggaaagaaatacaaagttaggacaagccaacgtagcaagtcccattaagtccattttcctcaaagtaacagctttactcaacttcttatttcctttagtgcaagaatcaatttttgctggggattcctctggttgtcttttaactgtagtattgcaggattaccaggggtatgtcctctcattagtaaatcacagagttactattggcaacttggaagtgatgaggactgcctatagacttctgaggttggtcactgctggtaacccagagttagatttggcatgaacctttgtcattgtatcgcatcacccttcttcctcttccaccaggcagatttctgagttcataacaacaacaacaacaacaacaacaatatttagcatgccatgttctacatcaataactgcaggtgatgggtgatttcctgccacgtccttggctgaaaccataatactttgctgtctgtgcctctgtggcccatcttgcaatgggtattgagattctggacaacaggtctattagaagatggttgacaacatacatgattatactaggagagcgagaaagctttgaagtaaccatgccaattgcgtttgcttcacagttcatgtagagtggtttcactgtttcaccctaatttcagtataaattgtgggagaagggcatattgttgtaggatgcattcttgtatctggtctgttgagtctattttctcttacagcccagccgtcaaagctatagaaaattgtaccttataaataatatacatgtttatttttatttgttttctactttgactaatctataggatgcttttgtgcaaaaatgaacatattagtttatgcatatgcgcatagacctttattggttgtgtagcttaactcagtaagaataggtctcatatttaggtaatcattactagtcactgactgcagtccagtaccccttttaggacagccactaataaaactttgaaagggaaaaggataaaaatgaaaatgtgctgttcagtttccctaccacaaacccgaagggttatggcaaagctactagtactgttttcccttccaattgatcaagctgtcaccttgacggtattttctaacctatatccttgcttctgcatgcaggacatctggtgccatatacactccctgatgccattcaaagatgctgcccgtgctgcatgtgtgtctcatgcttttcgtcgttcctggcaacaccgccccaatcttatattttgtattggaacactggggttggatttcatcaacaaaattgatcgtattataaaaaaccactcaggcattggcatcaaatcgctacagttagaatatgatactttttgcaatgctagaaggagcgctagcatcagctatcatctcaataattggcttcagattgctgttacaccatggattgaagaactaatccttacactgtcgctatcttcatacaatgtggattacaatttcccgtgctcacttttatctgatgggagaggaagttcattgcgacatctttatcttggcagttgtttctttcatcctacagttaatcttgaattgagaaacctgacgaggttgcatctggttactgtacatattacaggagatgagtttgggtgccttctttcgaattcttatgctttggagcgattggaacttaaatattgttatggaataatttgtctgaagataccttgcctgttgcaacgccttagccacctggaagtgtttgaatgcagaatgctgcaagccatagagaataaggctccaaatctttgcagttttgaccttggagctaggcaggtacggctcttgcttggtgaatcattgcaaatgaaaacactatccttggactatcctagtgccgtctattatgctcgtgcagagcttccatccaatgtgccaaatcttgaaattctcaccatttgctcggatcacgaggtatatccacaaacatgaaatgattatggacgtgcttatgtttatataacaatacttgcaccttcgaaaaatgtcatcagtctgattttctttatgcagatggttgatacaccaatgttgcctagcaaatttttctatctcaagtgcttgactattgatcttgcttggagactttccccagcctatgattatttctctctgatttcttttcttgacgcttctccttccttggagactttttgtctagaggtaagctaattttcactctgcaaacttatcagtgactggtgacaaccatcaatttcaagtatattggcttttcatctctagatatcacaggaccgaatggagaatgaattgattattggagatatgtcacatatgaggcaaatgctagaacaccgtcatgacaacctccagagcgtggagattattggcttttgctatacaaagagcttgatcgagctaacatgtcatattcttgacaatacaacgtcgcttaagcaccttaaactggatactactcgtgatgtttttagctgttctacaggcaaacacgacaaatgcttccatatgggtaaggatatgctcaccgaagccaagaaagcagttttggcaattgaaacttacatcgagccaaaagttccctccactgtcatgctaaatgttgtgaaaccttgcaaccgttgccatgttgctgaatcttagttctatttttttcctaacataattcctatgtagatgattatggagttttttaactgatcatgttttctgtcttcacacaactgaattacgagtcacatccaattgaattatgagtc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0202500, RefSeq:Os03g0202500