Os10g0170200

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Revision as of 08:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0170200| Description = Similar to 40S ribosomal protein S20 (S22) (Fragment)| Version = NM_001070767.1 GI:115481277 GeneID:4348185| Length ...")
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Gene Name

Os10g0170200

Description

Similar to 40S ribosomal protein S20 (S22) (Fragment)

Version

NM_001070767.1 GI:115481277 GeneID:4348185

Length

2978 bp

Definition

Oryza sativa Japonica Group Os10g0170200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:4512648..4515625

Sequence Coding Region

4512753..4512888,4513011..4513124,4515272..4515414

Expression

GEO Profiles:Os10g0170200

Genome Context

<gbrowseImage1> name=NC_008403:4512648..4515625 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:4512648..4515625 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggctgcggtgtacggcgccggcggcgcgatgaagggcgggaagctcggcatggaggaggcgcgggagctgcagctcaaccgcatccgcatcaccctctcctccaagaacgtcaagaacctcgagaaggtttgcgctgatctggtgaagggcgccaaggacaagcagctgcgcgtcaagggccccgtcaggatccccaccaaggtgctccacatcaccacccgcaagtcgccgtgcggtgaaggaacaaacacatgggatcgtttcgagttccgcatccacaagcgggtgatcgatctcatcagctccccagatgttgtgaagcagatcacctccatcaccatcgagcctggtgtcgaggtcgaggtgacgatcgctgatgtgtaa</cdnaseq>

Protein Sequence

<aaseq>MAAAAVYGAGGAMKGGKLGMEEARELQLNRIRITLSSKNVKNLE KVCADLVKGAKDKQLRVKGPVRIPTKVLHITTRKSPCGEGTNTWDRFEFRIHKRVIDL ISSPDVVKQITSITIEPGVEVEVTIADV</aaseq>

Gene Sequence

<dnaseqindica>106..241#364..477#2625..2767#gccccctccgaaaccctaacgccacccgcgccgccatccccgagcaccaccaaccccaccccccgagcgagcggagcggagaacgcgaggcgaggcgaagcaaacatggcggcggctgcggtgtacggcgccggcggcgcgatgaagggcgggaagctcggcatggaggaggcgcgggagctgcagctcaaccgcatccgcatcaccctctcctccaagaacgtcaagaacctcgagaagggtaatccattctttctctttttcttctatagtttcagttcgttgtcgttcagagaggattagattagatcggatttttttttgctgagagcgcgaagctgattcgtgtgtttatggttgcagtttgcgctgatctggtgaagggcgccaaggacaagcagctgcgcgtcaagggccccgtcaggatccccaccaaggtgctccacatcaccacccgcaagtcgccgtgcggtgaaggtattgaccagttgcagccacctctaattgcaatgcttgattgggtttgaatccatttgtttttgtggtatgtttcgactcatgggtatagctttggtttaggtggttaggaaatggattggtggagacagatgccactgtatagatgccagtgtatagatgcttggttaagctagatcctggtctaaattagtgctcttggttggtgactagtgtggattgtgtgaccattggaatcatttagtcaaaactatttgatttttcaggcaatctctttgttgaaatttgccttagttagagtacttcactaagtgttattgttgtatggccatgttcttatagtgactttcggctatctaaaatctgcaataaagactaccagcaacaagttgccaccaaaatgtaatgaaggatgaatgtttaagttttcgagtgaaagcacatggtatagcaagttgagtagaagggttactattggaggtttgtggtgaataagtttggtttacctgttctttgtcgacccaaccatttcatcacccaaccatttcatgcatggagatggatgggcagcgggatagcaagcgatggacactgtcaagctacaacaaactaggatattcctatgttattcacttctagataagggaatgatctagaggcaagctcagaaaacttgccgttacccccacagtctcatattaagggggcagaatatacagacgtttcttcaattttagtgttattattctccacatgtcataattttaaagatagccaagccaagttctgaagtcaagaaggtttagtaagattttgtttagcagggatttggaaggcacatatgttggtattctattggaatgcaagtgggctggcttttgaacccatttatgggctattcaagtgggtaaaccataggttggtgcacttaaatggcctataagtgggtttgtgggctggccctcttgtatcctgatagtttagtatgattggtaataatagcaatgctacttttaaatttaaggtttgttatggactagtgataactgttatgggatcgagtaccagtggcacaagaaactactggctagtctcgtagcttgctaggtactccctctgtcccaaaataaacaaagctagtacggggatgtggcacttcctagtcctgtactaggtttgtttattttgggacggagggagtatcatagtttgttactcctctggttactatttatctttttggctcctaacctacaaaggtcgcagtgtagtaaaacctcctgcccaaaatgtagctctctttggctttgaatctggatatgaacttgtctagattcatagctagatatagttacaccttgggatggatgtagtattgtactccctctgtttttaaatgtatgacgctgttgacttttagatatatgttgacaattcgtcttattcaaaaaatcgagcaaatataaaaatataagtgaggcttaaggtatatttgatgataaaacaagtcatggcaaaattaatgatacctgtataacttttttgagtaagacgagtggtcaaacgtagatttaaaagtcaacggtgtcatatatttataaatggaggtagtattagagaaggaatccattgataaacaagattagtgctcttcccactattatagcaaccataggctcgaagcctgcattgcgcaagagacttggttgcaaaaagacatcactaaactaaaggatcaaactttacgcccatttaagtggacatgtgagtttgtttcatgggatttattattatgtgaattcattgatttgttaattggacaaagtacatgatatgtttaacttgtaatgtatatcctttttgtgtgccaatcatcctgtacccctgtttacctatgctcatgtagttgtagcatattgttctgatgattgacagtttttttactttcatgcttatctttcatcaatatatcttcaggtcagtttatgcttgcaacagttaaactggacgctctttgttagatgaaaccactttggatgctagttgcttaagctagggaaatttgctgacatcttgttggcttaacttcacattggttgggttttcttgtgctaattcaggactattttgcgttcttttctgaccaggaacaaacacatgggatcgtttcgagttccgcatccacaagcgggtgatcgatctcatcagctccccagatgttgtgaagcagatcacctccatcaccatcgagcctggtgtcgaggtcgaggtgacgatcgctgatgtgtaatgctgccaaactagcactaccttagacctacctgtcttgtttctctgctgcttagaatctcggttccgattgccatgcgtgtaacggacatccaactggtttagtgtatctgggtcttttatatgtgcgcggatgctatggatctttctcatgtaagaggtgtgtaactcgccagttttgcttcaaccacatgaaatttggtattggattc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0170200, RefSeq:Os10g0170200