Os03g0207300

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Revision as of 12:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0207300| Description = Similar to Casein kinase II alpha subunit| Version = NM_001055860.1 GI:115451448 GeneID:4332003| Length = 4629 bp| ...")
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Gene Name

Os03g0207300

Description

Similar to Casein kinase II alpha subunit

Version

NM_001055860.1 GI:115451448 GeneID:4332003

Length

4629 bp

Definition

Oryza sativa Japonica Group Os03g0207300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5643400..5648028

Sequence Coding Region

5643618..5643674,5643808..5643876,5643977..5644040,5644145..5644227,5644363..5644428
,5644551..5644641,5645075..5645232,5646059..5646253,5646726..5646855
,5647713..5647798

Expression

GEO Profiles:Os03g0207300

Genome Context

<gbrowseImage1> name=NC_008396:5643400..5648028 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:5643400..5648028 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgacggcccgcgtctacgccgacgtgaacgtgcaccgccccagggagtactgggactacgaggccctcgccgtcgaatggggtgagcaggatgattacgaggttgtgcgaaaggtaggcagagggaaatacagtgaagtcttcgaaggaattaatgtgacaaatgatgagcgctgcatcattaaaattctcaagcctgttaagaaaaagaagataaagagggaaataaaaattcttcagaacctctgtggtggtccaaatattgtcaaacttcacaatattgtcagagatcaacaatcaaaaactccaagtttgatatttgaatatgtaaacagcacagatttcaaagttctgtatccaacattgacagactatgatattcgattctacatttatgaacttcttaaggcattggattactgtcattctcaaggaattatgcaccgcgatgtcaagcctcacaatgttatgattgaccatgaactccgcaagcttcgcttaattgattggggacttgctgagttttattttccagagaaagagtacaatgttcgggttgcctcaagatacttcaaagggcctgaattgctggttgacttccaaagttatgactactctttagacatgtggagccttggctgtatgtttgctggaatgatatttcgcaaggaaccattcttctatggccacgataaccatgaccagcttgtcaaaatagccaaggttctaggtacagaccagcttaatgcttacctgaataaatacaggattgcacttgatccccagcttgaggctctgattgggaggcataccaggaaaccttggtctaagtttataaatccagaaaataggcatcttgtctctccagaggctattgattttcttgataaacttattcgcttcgaccaccatgacaggctgaccgctcgtgaagctatggcgcatccctactttgaacaagtgagggcagcagaagactgcagaatgagaacgtaa</cdnaseq>

Protein Sequence

<aaseq>MSTARVYADVNVHRPREYWDYEALAVEWGEQDDYEVVRKVGRGK YSEVFEGINVTNDERCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLHNIVRDQQSK TPSLIFEYVNSTDFKVLYPTLTDYDIRFYIYELLKALDYCHSQGIMHRDVKPHNVMID HELRKLRLIDWGLAEFYFPEKEYNVRVASRYFKGPELLVDFQSYDYSLDMWSLGCMFA GMIFRKEPFFYGHDNHDQLVKIAKVLGTDQLNAYLNKYRIALDPQLEALIGRHTRKPW SKFINPENRHLVSPEAIDFLDKLIRFDHHDRLTAREAMAHPYFEQVRAAEDCRMRT</aaseq>

Gene Sequence

<dnaseqindica>4355..4411#4153..4221#3989..4052#3802..3884#3601..3666#3388..3478#2797..2954#1776..1970#1174..1303#231..316#agagcacccgaccccacccagaagaaggaaaaaaaaaatccgatcgggcctcgccgcgcgcgccggccaccgccaccgccaccgctaccacgagcgccatactcccctccctcctcgccaccgtcggctccctcgccacaggcgccgtcgcggcgctcgcggcggcgggggcgcacgcggggtccctcccccgcgcccgctcggtggcgtcggtagcggcggcggcggccatgtcgacggcccgcgtctacgccgacgtgaacgtgcaccgccccagggagtactgggactacgaggccctcgccgtcgaatgggggtaagaactgattccttcccacctacgcctcgccgtgctaccgtgtgattgtcccccccccccccccccccactcgtgtcgtcgtcgcctagaataacgtagcgatgcgagatgattgcatctgtgactgtgtgtgtgttgctggagggttggggatagatcgtacgattgaactgcggagattgtgcgagctgcgaactagctgttgtcgatcggtgtgttgttcggcagtggtatcgctcgatgtggctattgggtctggtcatcatcgtgttgccaatttagagttggaccttctgtttttgatactgtatatttcgaaacctttgttaccaagctatgatcatacaattcctttcatctcggtgatagtttgaagtttgacaggaaggattagttgctaaagttttcctaattgtagttggggaggtatatatatattagttgaacaaatgggcactgttcttcaatactattgatggcctttttttttggtgggtcatctgactagatttatcatgtgagctgtgtgtgcattgagggaactacattctacactactaaaatcactcacaaatatattcattgagggaaaccattttatctcaatgtatggccagaggaggttttggtgaaataaactagatttgcaccaaccaatatgcctaactggataatagacagcatttacatgaccatatattgttatcatgattaaaaaatgttcttctaccttgctaatatctatttgactgttttaattgacaacttgggggaatgtgaagtaaaaaaaaatcaaactatttattttcttttagttatgctctgttaccaatggattgttcttctccattcagtgagcaggatgattacgaggttgtgcgaaaggtaggcagagggaaatacagtgaagtcttcgaaggaattaatgtgacaaatgatgagcgctgcatcattaaaattctcaagcctgttaagaaaaagaaggtatccttgttttctttgaaaattaacatatatggatgttctgcttaaattattcctcgcgacacactcaatacttggaacagtttgatggatcaaacctgcattgcctacttctctaaacgctgacttgttccttggttaaatcagctaaattttaacatcctaattctgttcaagtccatttgtgccattttcagattttatggctgttggtacttttgaattcagttacttcattgaatccagttactagattgtatggatggtggtacttaagaagttagattattattaactacagtttttattatttagtttttgtgctcctttccactacaatgagcgatctcacttttgctcatttgttggatatttaacctcatatcttttcttccgaactgttctctgtttgctcatgtgcttattagaattctctgtgctattatatatgagcagtttaattcttttgcagataaagagggaaataaaaattcttcagaacctctgtggtggtccaaatattgtcaaacttcacaatattgtcagagatcaacaatcaaaaactccaagtttgatatttgaatatgtaaacagcacagatttcaaagttctgtatccaacattgacagactatgatattcgattctacatttatgaacttcttaaggtagcgcttctgttttaatttagtcattagtagaagtgttgaaaatttcagctcttgtgatgaatatagttgtcaatacttgggtctgattgttcctatcacaccatattaagctaaactttgcccaaatccattgtgctacaataagttcacgcttacaaatcagtttttgtgctttagtctaacaatgatagtttgaaatatctgtatgtacataccccttcagatggtgaccattggctatgtatggacttaataacaagctcttgaattgtgcttgtggagttgtgggttgtggttgttccaagtggcattagcttaacatatttcacgatggcattatggaaaggctatgcctggtagatagtgactatgatgcaattgttgtttattgcaatgttgaatgtcttatagaactgtatgcattaatctataaattgattaacttgactctctagcatacttagtattaatgctatggcctacagtagtttgaattagaggctgaaacaaatgttgcaactttatgttctgcttgattagtcttgcatatatggtccacttataaagtttgtttctttcatgtcagacggtaacatagaaagtctacctaattgtttatgtgaatgtactgataacaaaaaggatatgtggtaattacagaacattctattatattcttatttagttactagtttcaataatctcccttctatggcttccgttattcagttgggcttgttcggtgttcgtcgatttagtagccaggacttatttctaatctcctgttatcttttttctaaattccgtcctgcttaccttccaggcattggattactgtcattctcaaggaattatgcaccgcgatgtcaagcctcacaatgttatgattgaccatgaactccgcaagcttcgcttaattgattggggacttgctgagttttattttccagagaaagagtacaatgttcgggttgcctcaaggcaagttcataaaatatgccttcatgattctgtagctccgtcaattgatggtgtcctgtttatttaaatgtttaccccatcctattaaccccaagaagatatctaaatttccattatagaacattatttatagagtgcttgggactagtttagcttcctattagtttcatattcatatttatggattatcgtttgttatttcaataaaaaatatctgaagtgacatagccttatgccatcgcttgttacctttattctgcataatatttgttagcaaaataattattttgaatttgctaattttatggataagcagaatccatcctctgttaccagtgttatagcaaatttattggttttagaagactatataagttttcttatatttgaaaatgtggatagttttatctgcaaacttattttctttatccagatacttcaaagggcctgaattgctggttgacttccaaagttatgactactctttagacatgtggagccttggctgtatgtttgctggaatggtgtgtttgccctcctatgattataaaataacctatcaaaattgccatggccttacttctgtaaattacttgcgtatagaaagatagcaactgttatgctttatttactgtttttgatgcagatatttcgcaaggaaccattcttctatggccacgataaccatgaccagcttgtcaaaatagccaaggtttgctacagttcacatagacgcatgcgcatgtgtttatgctgagcatttgcacttgtatctgtatatgtctgctctgctttctgcctgaaaatattgcaggcattagcatattgatgaactatacctgagcaggttctaggtacagaccagcttaatgcttacctgaataaatacaggattgcacttgatccccagcttgaggctctgattgggaggtattacctcgtagaatatttgttctgatgctttcacttcatatcacattttggattagtaaaaaaaaaattacttgatacatttgttgttgctctacacacaggcataccaggaaaccttggtctaagtttataaatccagaaaataggcatcttgtctctccagaggttatatgcatttccttctcgtcctatgatttttcttttccatatcccatttccctctatcaggagtacaggactaaacgtcgcaccaatctttgtgcaggctattgattttcttgataaacttattcgcttcgaccaccatgacaggctgaccgctcgtgaagctatggttggttcctgtcaagctattcattcacaggcttaacttgctgttggtcgagcatatgtattgcaaacagtttgttggcctggaccctggatcgcaagtctgtaacatatgctgctttttgtctcccctgcaggcgcatccctactttgaacaagtgagggcagcagaagactgcagaatgagaacgtaacatgaacggaacgccatctgctgctgttggattgcactggaaatctgttgcagatttgctcctttgttttattctattctactgaggcaacgcaaaagttgtagcatgttgcgccttaggtccgcttgctgctgagcggtgcctaacatccttaaattttgaaacacatcataaagtgccgagtctataaatcagattatcagagataatctcttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0207300, RefSeq:Os03g0207300