Os03g0207900

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Revision as of 12:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0207900| Description = WD-40 repeat containing protein| Version = NM_001055863.1 GI:115451454 GeneID:4332006| Length = 3865 bp| Definition...")
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Gene Name

Os03g0207900

Description

WD-40 repeat containing protein

Version

NM_001055863.1 GI:115451454 GeneID:4332006

Length

3865 bp

Definition

Oryza sativa Japonica Group Os03g0207900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5673684..5677548

Sequence Coding Region

5673849..5674075,5674567..5674840,5674928..5676021,5676516..5676614,5677213..5677231

Expression

GEO Profiles:Os03g0207900

Genome Context

<gbrowseImage1> name=NC_008396:5673684..5677548 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:5673684..5677548 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaacgtccctatagtcgatcctttgcagggggatttccctgagacgattgaggagttcttgcagtatgggagtatgaaatgcatagcattcaaccgcagaggaactctccttgctgctggatgtgcaaatggtacctgtgttatctgggactttgaaacaagggggattgcaagagaactgcatgataaagattgtactgcacctataacaagtgtggcctggtctaaatatggtcaccatttgctcgcctctgctactgacaagtcattgacactttggcatgtggtaaatgagaaaaaaattgcccgcattactcttcagcagactccgttaagtgtccgtcttcatcctggtggtccatctaccccatctatttgtttggcatgccctctctcgtctgcacctattcttgttgatttaaacactggaagtactacagttctcccagcttttctgtctgataatggtaacctccctgctcctaatactcgcaataaattttctgatggttctccaccttttacaccaactgctgcaacatttgacaagtatggggatctgatatatgtgggcaattccaagggagagatattaattatagattcaaaaagcatcaaggtacatgctgtgattcccatcccaggtggaacagtagttaaggatattgttttcagcagggatggccgatatctactcacaaactctaatgatcgggtgattagagtctatgataatcttctgcctgttaaaggttctggagaggagatagaaaaaataagcagtaacaacattagctatgagagtcactacgagaagctaaaagcaaatggtgcaagctgcctagctatttcttgtgaacttttggatgctatcgcaaagataccgtggaaggcaccatgctttagtggtgatagtgagtggattgttggtgcttcagcaagcaaaggagagcacagattgtgcatatggaaccgatcaggacgtcttgtaaaaatccttgaaggtccaaaggaagctcttattgatattgcctggcatccagtagatcctacaattgtttcagtgtctgtagcaggcttagcatacatttgggccaaggaacatgtagagaattggagtgcatttgctcctgattttgtagaattagaagaaaacgaagagtatgttgaacgagaggatgagtttgacttaaatgcatatgtagaaaaggctgaagaacaactggtaaacgaggatgagtatgtcgatattgagacatatgataaaaactcaacgttcagtgatttggatgatagcagtagcacaacgatggagctcatctacttggcagctattcctatcccagacactcccgatgagcagcccgacaaatgccttggaagttcatcgaagttggaggacagcaatcattctgattccccatcctcattggatgctgtacagaatggacaagcgattcctccagcatctagtccaatggaagtggataattctactgctgaagaaccagctgaagccgtgaactcaaagaggaggcggaggctgtcggctaagggcctcgagctgcagcaagccgagaagggcaaaaaaccaacaacaaagaataagtccaacggcaagtccccagggtccaatggcaagcaattggagcctgctaacgggaacagctctgctgttgatgatgaagccaccgaagacgatgagatctga</cdnaseq>

Protein Sequence

<aaseq>MNVPIVDPLQGDFPETIEEFLQYGSMKCIAFNRRGTLLAAGCAN GTCVIWDFETRGIARELHDKDCTAPITSVAWSKYGHHLLASATDKSLTLWHVVNEKKI ARITLQQTPLSVRLHPGGPSTPSICLACPLSSAPILVDLNTGSTTVLPAFLSDNGNLP APNTRNKFSDGSPPFTPTAATFDKYGDLIYVGNSKGEILIIDSKSIKVHAVIPIPGGT VVKDIVFSRDGRYLLTNSNDRVIRVYDNLLPVKGSGEEIEKISSNNISYESHYEKLKA NGASCLAISCELLDAIAKIPWKAPCFSGDSEWIVGASASKGEHRLCIWNRSGRLVKIL EGPKEALIDIAWHPVDPTIVSVSVAGLAYIWAKEHVENWSAFAPDFVELEENEEYVER EDEFDLNAYVEKAEEQLVNEDEYVDIETYDKNSTFSDLDDSSSTTMELIYLAAIPIPD TPDEQPDKCLGSSSKLEDSNHSDSPSSLDAVQNGQAIPPASSPMEVDNSTAEEPAEAV NSKRRRRLSAKGLELQQAEKGKKPTTKNKSNGKSPGSNGKQLEPANGNSSAVDDEATE DDEI</aaseq>

Gene Sequence

<dnaseqindica>3474..3700#2709..2982#1528..2621#935..1033#318..336#gcgcgcgcctcgcctcggcccagcgcgcgccggtttcggactcgtgctccaaacgcatatcccctccttcccctcctcactcttccgccgagagagagagagagagagagagagagagagagaggtttttcccttcctagggctttgtgtagcggagcagcagcggggcggcctcctccgccctagccctcgccctggtccgtccggcgtggcgcgcgctctcgccacctggtgttttcttgggggcggttcgccggttgcctccgcctggggacagcggcgcggcgaggcgaggctgagggggtggcgccgccgcgatgaacgtccctatagtcggtgagtttcgtctctctctcgcattctgcgtgggggcggcgggatgggtcggggacgcggtgattggagcgattcgggggtgggtaggtcgagagtttgggggatttgtgcggtacttccgccgatttgggtgggattttaggtttctagggcggatttgcgcgaattagggctgcgctgtttggccctagtttcccccctcttttggtgattttgggacttgtgggtaacattagcgtgtatttgtgctatagtgaacgcttttgctggtttctgtctcctggatgcattgaaatgaagtggtattcaagatttaggctcagattttcgattgttttgcttatctaggagtaggatttgagaagatttgcagtattggcctattggttaaatttgggaatgcactggtgcctttactagtggcgctgcattttctacgtgcatcaaattctgaaattttctgttcagataactggttcttttgcaattacggatgttgtgctaagagtcaatgagcattgtcttgtgtttttttatgataaaactacagtgaattttgcagcaatatactgacctctgctatgttatgttggtttagatcctttgcagggggatttccctgagacgattgaggagttcttgcagtatgggagtatgaaatgcatagcattcaaccgcagaggaactctccttgctggtaattatcccattttatattcctgtaacagtacacttaaattgtgctcatatgtaattatcttcttatttcacacagactgtttattttacactgtgcgcttgtgaagcatgcctgcacgattaatgttagttttaatctgtttgaagtttctttagctgttaacacttaacagtaaccaaagccatttcttgtagcctgaagtagttccttttcttcttttgtgttgtctccgcatctctatttatcttggcattgccacatataagtataacatgatgatatgataagggatctgtttactttaatgcatccttttgttcttttctaagactaacctgtgcacacctgtaaggccttgtgatatatctatacacagatgtaaaaacatcattcatgtggagtgccataaattttggtggactgctgctttgtacttgaaccctgaaagcaaatttatccaacaatttatgtcagttgattttttttttcagctggatgtgcaaatggtacctgtgttatctgggactttgaaacaagggggattgcaagagaactgcatgataaagattgtactgcacctataacaagtgtggcctggtctaaatatggtcaccatttgctcgcctctgctactgacaagtcattgacactttggcatgtggtaaatgagaaaaaaattgcccgcattactcttcagcagactccgttaagtgtccgtcttcatcctggtggtccatctaccccatctatttgtttggcatgccctctctcgtctgcacctattcttgttgatttaaacactggaagtactacagttctcccagcttttctgtctgataatggtaacctccctgctcctaatactcgcaataaattttctgatggttctccaccttttacaccaactgctgcaacatttgacaagtatggggatctgatatatgtgggcaattccaagggagagatattaattatagattcaaaaagcatcaaggtacatgctgtgattcccatcccaggtggaacagtagttaaggatattgttttcagcagggatggccgatatctactcacaaactctaatgatcgggtgattagagtctatgataatcttctgcctgttaaaggttctggagaggagatagaaaaaataagcagtaacaacattagctatgagagtcactacgagaagctaaaagcaaatggtgcaagctgcctagctatttcttgtgaacttttggatgctatcgcaaagataccgtggaaggcaccatgctttagtggtgatagtgagtggattgttggtgcttcagcaagcaaaggagagcacagattgtgcatatggaaccgatcaggacgtcttgtaaaaatccttgaaggtccaaaggaagctcttattgatattgcctggcatccagtagatcctacaattgtttcagtgtctgtagcaggcttagcatacatttgggccaaggaacatgtagagaattggagtgcatttgctcctgattttgtagaattagaagaaaacgaagagtatgttgaacgagaggatgagtttgacttaaatgcatatgtagaaaaggtgaatgacaattctttacctgtctttaagacttttagctgttactcgtgccataaaaatgtgttttatctaaatctttctgtataggctgaagaacaactggtaaacgaggatgagtatgtcgatattgagacatatgataaaaactcaacgttcagtgatttggatgatagcagtagcacaacgatggagctcatctacttggcagctattcctatcccagacactcccgatgagcagcccgacaaatgccttggaagttcatcgaagttggaggacagcaatcattctgattccccatcctcattggatgctgtacagaatggacaagcgattcctccagcatctagtccaatggaaggtaaagtgctagactatggtagtatttcatttcagttcttattattatgcaataatatgtagtatgatagtatcacttttatttgtttttcaattgaaatctactagcagtgtggtacattttgtattgatctaaagaattgcacaatttcttcacacaagggaacactgtagtgcagtcattatggtgagatataaattgaacctggtccttagtttaattgaacaaaattgtagcagtttactcatttcatatatatgtataatataaatgcacagttgggaaaccatgttattcaaagaaaactacaggtcatcatatgcaaagttgcaaactagaataacttgaaagtattggcaataaatgacaatgtatttctaggcagaaagaggatcttgtttcaagtattcattcaagataattccaccgtcaattatactgctattttctctgaaacatgggcatcattcttagttttatttctctggcagtggataattctactgctgaagaaccagctgaagccgtgaactcaaagaggaggcggaggctgtcggctaagggcctcgagctgcagcaagccgagaagggcaaaaaaccaacaacaaagaataagtccaacggcaagtccccagggtccaatggcaagcaattggagcctgctaacgggaacagctctgctgttgatgatgaagccaccgaagacgatgagatctgacctgtccatcattgataactttaactactttagttcgtggagcccctgttgagaacagagggaatatctctgtgtagtatgcattagaaacgattgaggaactatgtggtgcgctgaggcaaaatgaaatcgttaaatggaagtgggtggatctatgttgagatt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0207900, RefSeq:Os03g0207900