Os03g0208500

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Revision as of 12:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0208500| Description = Integral membrane protein| Version = NM_001055865.1 GI:115451458 GeneID:4332012| Length = 3991 bp| Definition = Ory...")
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Gene Name

Os03g0208500

Description

Integral membrane protein

Version

NM_001055865.1 GI:115451458 GeneID:4332012

Length

3991 bp

Definition

Oryza sativa Japonica Group Os03g0208500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5682493..5686483

Sequence Coding Region

5682893..5683099,5683598..5684250,5684346..5684482,5685874..5686451

Expression

GEO Profiles:Os03g0208500

Genome Context

<gbrowseImage1> name=NC_008396:5682493..5686483 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:5682493..5686483 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgcgcgacctcgccgagagcctcctccccgtggggggcggcgccgccaccgccaccgccaccgccaccgcccacgacgagtacgacgagcgcgcgtacgactccgacgacaaggtctccatcgccgtctcggactccgactcggaggacggcggcggcggcggcggcgacgccatgcgcccggccttctcgtggcgcaagctgtggcggttcacggggcccgggttcctcatgtgcatcgcgttcctcgacccggggaacctggagggcgacctgcaggccggcgcggcggcggggtaccagctgctgtggctgctgctgtgggcgacggtcatgggcgccctggtgcagctgctctccgcgcggctcggggtcgccacggggaagcacctcgccgagctctgcagggaggagtacccgccctgggccacgcgcgcgctctgggccatgaccgagctcgcgctcgtcggcgcggacatccaggaggtgattggcagcgcgattgccatcaagatcctctccgctggcaccgtcccgctctggggcggcgtcgtcatcaccgcgttcgattgcttcatctttttattcctggagaactatggagtgagaaaattggaagcatttttcggagtcctgattgcagtcatggcagtatcatttgcaattatgtttggtgaaacaaagccaagtggcaaggagcttctgattggtttggtggttccaaagttgagttcaaggacaatcaaacaagcagttggaattgtgggctgcataatcatgccccacaatgtcttcttgcactcagcactagtgcagtcaaggaagattgacacaaacaagaaatcccgtgttcaagaagcagtgttctattacaacattgagtccattcttgccctcattgtctcgttctttattaacatctgtgtcacaacagtttttgcgaaaggattttatggatctgaacaagctgatggtataggtcttgagaatgctggacagtacttacagcagaaatatgggactgcattctttcctatactgtatatctgggctattgggctgttagcatctggacagagtagcactattactggcacatatgcaggccaatttgttatgggaggcttccttaatcttcggttgaagaagtggttaagagcaatgattactcgaagctttgcaattattccaactatgattgtggctttattttttgacacggaggatcctacaatggacattctgaatgaggcactcaatgttcttcaatccatacagataccatttgcactgattcctctcatcacacttgtctcaaaggagcaagtcatgggatcatttgtggttggtcctatcacaaaagtgattagctggattgttacagtattcttgatgctcatcaatgggtatcttatactgtccttctatgccactgaagtccggggagcattggttcggtcaagcttgtgcgttgtattggcagtttaccttgcattcatcgtctatcttatcatgcgaaatacctcactgtattctcgcctccgctcagcaatgacaaagagcacatga</cdnaseq>

Protein Sequence

<aaseq>MASRDLAESLLPVGGGAATATATATAHDEYDERAYDSDDKVSIA VSDSDSEDGGGGGGDAMRPAFSWRKLWRFTGPGFLMCIAFLDPGNLEGDLQAGAAAGY QLLWLLLWATVMGALVQLLSARLGVATGKHLAELCREEYPPWATRALWAMTELALVGA DIQEVIGSAIAIKILSAGTVPLWGGVVITAFDCFIFLFLENYGVRKLEAFFGVLIAVM AVSFAIMFGETKPSGKELLIGLVVPKLSSRTIKQAVGIVGCIIMPHNVFLHSALVQSR KIDTNKKSRVQEAVFYYNIESILALIVSFFINICVTTVFAKGFYGSEQADGIGLENAG QYLQQKYGTAFFPILYIWAIGLLASGQSSTITGTYAGQFVMGGFLNLRLKKWLRAMIT RSFAIIPTMIVALFFDTEDPTMDILNEALNVLQSIQIPFALIPLITLVSKEQVMGSFV VGPITKVISWIVTVFLMLINGYLILSFYATEVRGALVRSSLCVVLAVYLAFIVYLIMR NTSLYSRLRSAMTKST</aaseq>

Gene Sequence

<dnaseqindica>3385..3591#2234..2886#2002..2138#33..610#cccacctcgccgtcgccgcactcccccccaccatggcgtcgcgcgacctcgccgagagcctcctccccgtggggggcggcgccgccaccgccaccgccaccgccaccgcccacgacgagtacgacgagcgcgcgtacgactccgacgacaaggtctccatcgccgtctcggactccgactcggaggacggcggcggcggcggcggcgacgccatgcgcccggccttctcgtggcgcaagctgtggcggttcacggggcccgggttcctcatgtgcatcgcgttcctcgacccggggaacctggagggcgacctgcaggccggcgcggcggcggggtaccagctgctgtggctgctgctgtgggcgacggtcatgggcgccctggtgcagctgctctccgcgcggctcggggtcgccacggggaagcacctcgccgagctctgcagggaggagtacccgccctgggccacgcgcgcgctctgggccatgaccgagctcgcgctcgtcggcgcggacatccaggaggtgattggcagcgcgattgccatcaagatcctctccgctggcaccgtcccgctctggggcggcgtcgtcatcaccgcgttcgattggtgggtgttgggaacgaacgaggctttcctttttgtccttaccccgttggtcttgttcacagaaaattcctagatttcctttttcagtttattgctgatcatagtatacagccccgagtttgcttggttcatgttttggtttggagctgcggcgagtagaatttgcgagtatgacatcgatatcgtttaactgattaggatttcctttcttacctgcggcgagtagaatttgcgagtaagttcatcggtttttttttttcttgactggcaaggagttcctttcttggataggagagttcgttgctttcttattggttaaattggacgctctgtttgctcttcatcgctgcccttgttcttttcccgtttttgaactaaaagactgtaattcgatgtgttttcgtcgatcctgttggtctctcgattgacacagcgagtattgtttgttcgttctcgtgttggactcttcccgatggcatctcaggagagagcagaaacctcgcttccgttctttccctttcctcctcctgtccttcgatcgcttcccttcctttctttggtcccgccaatcgttaatcgttaggtgagtaaataaagttcgtgtctttttggtgagttgcccttgtggcgaatccattttgagtgggactattcacttccattgtttgttcccccagttattattattattttggttagtgtgatgatggctacctttgcattcatcttcagaattccttcttgggagctaaaatttagacgaaactccagtttttcctctgcttcttttcgatcaattccgtgctacttgctgacggtattatgttgcgttgtagtaattatttttgttgccgcttgctcttttcttggagacgtttttctgttggttttgtcatcaaagccatgtttggtggtcgcggaatgcttaaaaactgtaatggtcccagatgtcctgggagtcgctcggtcagacgataatgcacgtttattgtttggtttaatacttctaatttatattcagttaagagacctgggattgttgattaatctaagggcatgtccttatgtattgtccgtacacttctacttagtgcttatcgtcttccctggttaggcccctagttttgaattttattgactactagatagggatgtttgggtatgaagctagtaacgatgaaaggaacaaatcatattaaaaatcgggatgactaataaagagacaacattttcctgtctgtttctgctgtagtgttattcaatgattctctattttgacttagcctttactttgtttatgtgctgacaaattgtctgttttgttatatgattgggaactgtccaataaaattgacatttgtttggcttacatgacgtgttattgatgccagcttcatctttttattcctggagaactatggagtgagaaaattggaagcatttttcggagtcctgattgcagtcatggcagtatcatttgcaattatgtttggtgaaacaaagccaagtggcaaggagcttctgattggtattcaagctgacttgtttgcaaatacttttgcttatcttgcagccttgagaagtcgaagagtttattctctctcttttcttttctttatctaggtttggtggttccaaagttgagttcaaggacaatcaaacaagcagttggaattgtgggctgcataatcatgccccacaatgtcttcttgcactcagcactagtgcagtcaaggaagattgacacaaacaagaaatcccgtgttcaagaagcagtgttctattacaacattgagtccattcttgccctcattgtctcgttctttattaacatctgtgtcacaacagtttttgcgaaaggattttatggatctgaacaagctgatggtataggtcttgagaatgctggacagtacttacagcagaaatatgggactgcattctttcctatactgtatatctgggctattgggctgttagcatctggacagagtagcactattactggcacatatgcaggccaatttgttatgggaggcttccttaatcttcggttgaagaagtggttaagagcaatgattactcgaagctttgcaattattccaactatgattgtggctttattttttgacacggaggatcctacaatggacattctgaatgaggcactcaatgttcttcaatccatacagataccatttgcactgattcctctcatcacacttgtctcaaaggagcaagtcatgggatcatttgtggttggtcctatcacaaaagtaagttttccctttaatatttctttatcatatgtctcatgttggcagataatttaactagtattgaactccatttgctgttttaggtcatgtgatcttattattaagtttttgtcatctgatgaaactgaacgaataaaaggttttcattttcataatcatcgacaacagttccttagtttcagatcattgtttctgtaggtgattaaattgatatgcatgaacatgattcttcaatgttttattccattaagctgttagccttgaagctgaaatccatctcatatatgtttgtctatgctatcctaccttcttacatctatataaactttttttcagtatatagttcaccattcaccaacctcttaatcaactgtagatttatttggtcggctttggttgtttaacagcatatctgtattcagatgagaaaagaaaacctgaatatatatgtttttgcaagggtaggctgttaactttatctttgcttatacttaggtgattagctggattgttacagtattcttgatgctcatcaatgggtatcttatactgtccttctatgccactgaagtccggggagcattggttcggtcaagcttgtgcgttgtattggcagtttaccttgcattcatcgtctatcttatcatgcgaaatacctcactgtattctcgcctccgctcagcaatgacaaagagcacatgagcgccttcagaagttttttgaacaaaaaaagggcaggacaattcccttatcggccttcagaactgttagtttctaccatggtgaagcagatcatattagaagaaagatgctcccccatgtaaaaacttgtactactgcctgcttgtattagctccaggaagaagcatagtaaaaaagtctatttgtattagctccaggaagaagcctaccgatgaactacactgtatattcctctgctgttgtataagtgcattagcgaattggttgggcttctccacttagggttgggataaaccacagtggcattcatgtgtttgaggttataaacagcagtagataactttgttacctttctcattttttggatgatgatgatctgcagaattgctgttgacacttg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0208500, RefSeq:Os03g0208500