Os03g0208900

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Revision as of 12:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0208900| Description = Similar to ADP-glucose pyrophosphorylase (Fragment)| Version = NM_001055867.1 GI:115451462 GeneID:4332014| Length = ...")
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Gene Name

Os03g0208900

Description

Similar to ADP-glucose pyrophosphorylase (Fragment)

Version

NM_001055867.1 GI:115451462 GeneID:4332014

Length

4696 bp

Definition

Oryza sativa Japonica Group Os03g0208900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5707983..5712678

Sequence Coding Region

5708278..5708378,5708492..5708533,5708851..5708920,5708994..5709086,5709248..5709395
,5709473..5709589,5710509..5710557,5710981..5711071,5711223..5711315
,5711407..5711453,5711561..5711621,5711815..5711893,5712026..5712126
,5712221..5712318,5712435..5712492

Expression

GEO Profiles:Os03g0208900

Genome Context

<gbrowseImage1> name=NC_008396:5707983..5712678 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:5707983..5712678 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgcctccgagcagcgcgtcgtcgccgtcatcatggtcggcgggccgaccaaagggacgaggttccggccgctgtcgctgaacgtgccgaagccgctgttcccgctcgccggccagcccatggtgcaccacccaatctccgcctgccgccgcatccccaacctggcgcagatatacctcgtcgggttctacgaggagcgggagttcgcgctctacgtctcctcgatctccaacgagctcagggtccccgtcaggtacctgagggaggataagccccatggatcagctggagggctctacagcttcagggattacatcatggaggacagtccgtcgcacattgttttgttgaactgtgatgtatgctcgagcttccccctgccagacatgctcgaggcccacaaaaagtatggtggaatgggtactttattagtcaataaggtctccgcagagtctgcaaaccaatttggtgagctcgtagctgaccctgaaacaaatgaactgttacactacacagaaaagccagagacttttgtgagtgatctcataaattgtggggtctatatatttacacccaatatctttaatgccatcgaggatgtcttaaaacagaagaaagacagagctaacctgcgccgtgtctctagttttgaagctcttcactcggcaacaaaagcacttccagcagactatgttaggttagatcaagatattttatcccctctagcaggaaagaaggaactttacacataccagactctcgacttttgggaacagatcaagaccccagggatgtctttgagatgctctggcctatatctttctcagttccgccatacctctcctcatcttttagcctcaggagatggcaaaaggagtgccactattataggtgatgtgtacattcatccgtctgcaaaggttcatccaacagcaaagatcggtcctaatgtctcgatatcagcaaatgcacgtattggagctggagccaggcttattcattgcattattctggatgatgttgaaattatggagaatgcagttgttatacactcaattgtggggtggaagtcaaccgtaggaaaatggtcacgtgtacagggtgaaggtgaccataacgccaaactcggtatcacaattcttggtgaagccgttgatgttgaagatgaagtggttgtagttaacagcattgtgctccccaataaaactctcaatgtcagtgtgcaagaggagatcatattatga</cdnaseq>

Protein Sequence

<aaseq>MAASEQRVVAVIMVGGPTKGTRFRPLSLNVPKPLFPLAGQPMVH HPISACRRIPNLAQIYLVGFYEEREFALYVSSISNELRVPVRYLREDKPHGSAGGLYS FRDYIMEDSPSHIVLLNCDVCSSFPLPDMLEAHKKYGGMGTLLVNKVSAESANQFGEL VADPETNELLHYTEKPETFVSDLINCGVYIFTPNIFNAIEDVLKQKKDRANLRRVSSF EALHSATKALPADYVRLDQDILSPLAGKKELYTYQTLDFWEQIKTPGMSLRCSGLYLS QFRHTSPHLLASGDGKRSATIIGDVYIHPSAKVHPTAKIGPNVSISANARIGAGARLI HCIILDDVEIMENAVVIHSIVGWKSTVGKWSRVQGEGDHNAKLGITILGEAVDVEDEV VVVNSIVLPNKTLNVSVQEEIIL</aaseq>

Gene Sequence

<dnaseqindica>4301..4401#4146..4187#3759..3828#3593..3685#3284..3431#3090..3206#2122..2170#1608..1698#1364..1456#1226..1272#1058..1118#786..864#553..653#361..458#187..244#gtcttctctcctctcaaaaagaaaaaaagcaccccgcgcgctcgagtctacgctcccatcgccctccgcctcgcctcgccgcaaatctcaccactcgccaccgcctccctccccctgcctcagcgcggctccacgctcccttccactttcgccgccggcgcgcggacggacgggcagcagatagccatggctgcctccgagcagcgcgtcgtcgccgtcatcatggtcggcgggccgaccaaaggtaaaggcagatccgcgcgcgtccatcctccgccgccgccggccagcgccgcggtgggtactcgtgttaccatctgacacacacggcgtgtttttttttcttttttttttggcaagggacgaggttccggccgctgtcgctgaacgtgccgaagccgctgttcccgctcgccggccagcccatggtgcaccacccaatctccgcctgccgccgcgtatggcagatttaactcccattgatttctcttcttgtgtgagaaaagaaagaaaagcaaaaattctaagaatctgggatccccgctgctgcagatccccaacctggcgcagatatacctcgtcgggttctacgaggagcgggagttcgcgctctacgtctcctcgatctccaacgagctcagggtccccgtcaggttagcctcctgccccccccccccccccccctccgacttgccatgggataagatggttcaattcaggagcatttgggggtttgttgggtgtcataacagtggcattgatggctttgctgtgacaatttctaggtacctgagggaggataagccccatggatcagctggagggctctacagcttcagggattacatcatggaggacagtccggtctgctcgtgttcccgattatcagcttgaatttcggaattcaattaacatgaacttgctgggattaattgtagtgggtttcttcacactgggctgtttgactagtgttggctaatttgggtgatatgcaaagcgttgggttggattacaggaagttttatcttctaaaacaactctccttttggttttgcagtcgcacattgttttgttgaactgtgatgtatgctcgagcttccccctgccagacatgctcggtaggttgctaagttactgaacttgggatagttcattgtgtctctcagctgtgtttgtttatgttagattctgatcactaattgttatcaccatctaatcattgtagaggcccacaaaaagtatggtggaatgggtactttattagtcaataaggtgcgaggacactacaacagaaccttctgtctgtgtttctaaagtcctgatattttcatacataacgttacctgcttacaatttttgtcaggtctccgcagagtctgcaaaccaatttggtgagctcgtagctgaccctgaaacaaatgaactgttacactacacagaaaagccagagacttttgtaagtacaagttctgatcatgccttgttttccttgctattctatttctcctcttcggatgatgcttgtgctttttggttttgaattgcatcagcactttagcattttgatggttctctaattcgttattaacaatgctctttatgtgtaggtgagtgatctcataaattgtggggtctatatatttacacccaatatctttaatgccatcgaggatgtcttaaaacagaagaaagacagaggtaatatgttcagctatatcttgacttttgccttgtaaactgatgttatgattcaaaagtagcccacaattattcaatcacgttgcatggaaactttctggtatactcagcttataacatctaagttctctggtgttttaaactttttcatataagaacataataatcattagaaacaattattatttggatcaggtgtgaaatgtcctgttcactataatgcaagtcaattggaaacttaggttcataaaaactatgctaataattatgctagtaactgtaccttggatcctcctttccttaaatgggagaaactacattccctcaattcagttaacatttctgcattgctccttttttgtccagtattggttcttcttattcacaacataaaacttattcctttccaatgctaaatttcagctaacctgcgccgtgtctctagttttgaagctcttcactcggcaacaaagtacgtgtatgatgtattcttctattcattgtcctgcatatttaacactatttcaaattaagtttttctcagttatggaaaagttttagatgcattgcaaagaataagcacactgtaatctataagtgcatcaccaggaagttgaaaacaaactgagaaacctagggaaatattctttcctttataacttatgatatcaatgatctctagtagattaatttctcgttagatatatgtactatccaggaatgaggaatcaacacttttgacttctgaatattaaatgtaacagcacactaatgaaagctgccactggaatttggtcgtatcaaagttttatgtcttgtattattgtacgtacaactcaataatcaagtactcaacatgtatttttcctgttggcttttgcttgtcatttgtggcatctccagtgtttttttttttggataactttagtaaagttggtttggtaccatgaacctggcatgataatgataatgactatcacacttttgtgaagctgtattcttcccttatcccttctatatatcccaggaggaacagtgcactgcctagaacacttacattctgttttaatccagtttaacagccatcaaagcatgcaacagagagaaacgaggggatgagtagactaaacctagcttacgccttgctggttttgtagaagatatatatattttttgttagtgttaacttaattaagcggctatgtgtagcaacacaatgtggattgtggaaaccagaatcatagcctccactttatttgtaatgtatagttactgttggcactagtcatccctggttataatttttgccattcaggacttgttagactaagtacaatagagctgccatttatttgttgcaatactgaccatcttgttgtaattgtcaacagagcacttccagcagactatgttaggttagatcaagatattttatcccctctagcaggaaagaaggaactttacacataccagactctcgacttttgggaacagatcaagaccccagggtaatagttgttcctaactgcactctttctgactttggaattgttaagtaataatgagagactgcacctatgcataggatgtctttgagatgctctggcctatatctttctcagttccgccatacctctcctcatcttttagcctcaggagatggcaaaaggagtgccactattataggtgatgtgtacattcatccgtctgcaaaggttcatccaacagcaaaggtggagtctggttctctattttgattagattgtgtttcatcctgctatctcatatacttctctgtttgattagttttagttttatgaaatgatgagggacattgtcttctaatatgaattttcgctaaagctaacccagtttagtaatgctccattaacagatcggtcctaatgtctcgatatcagcaaatgcacgtattggagctggagccaggcttattcattgcattattctggatgatgttgaaattatggttagttttctacgtaccatatgataaacctaatctcgctaacatgtatctcatgcagtttctttggtggcaggagaatgcagttgttatacactcaattgtggggtggaagtcaaccgtaggaaaatggtcacgtgtacaggcaagtattatatcgttgctcattttaaatgttttgcattccaagtgttttggaatagttcatcatatccaattcaagaggcaagaagaatatcgtaatgctttaatgcaaattcctttgctgtctaattttgttccctaacatttttagcatataaatttgggttttctgtagttccatctacaagatttatacatttttctcagaaaatacttctgcacgtatttagtttgcttaatttcaagtctggcgtgattgctcaacccagtgaaatgcatctttaggctcatttaatgaaagttctatttttcattcagggtgaaggtgaccataacgccaaactcggtatcacaattcttggtaagacccagtctgcacatggcctcccacaagaatcttgtgataatatgctttgtgcgtgtgggttagttcctatgattgagttgacacattatctctatttctaaatgcaggtgaagccgttgatgttgaagatgaagtggttgtagttaacagcattgtgctccccaataaaactctcaatgtcagtgtgcaagaggagatcatattatgatagtcctttcataattcatatttttattcaattccaaataaggtctgcggaccaatatgtagttcctctcttttattacctccttgtaagcttccccccagattgatatcattagtctatgttatagcaagcttgagatatggacagtgtaattttttagcgtaaaatttactgatgtaaaaatgtacaaacatatgacaatttttttttattgaactaacgattttcatcaagcatcaacagtgcgatggtgtatctggggttgtgttttggattatagatcatattgaatgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0208900, RefSeq:Os03g0208900