Os09g0257766

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Revision as of 07:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0257766| Description = Zinc finger, CCHC-type domain containing protein| Version = NM_001188808.1 GI:297726746 GeneID:9269384| Length = 492...")
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Gene Name

Os09g0257766

Description

Zinc finger, CCHC-type domain containing protein

Version

NM_001188808.1 GI:297726746 GeneID:9269384

Length

4929 bp

Definition

Oryza sativa Japonica Group Os09g0257766, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:4906561..4911489

Sequence Coding Region

4906719..4907759

Expression

GEO Profiles:Os09g0257766

Genome Context

<gbrowseImage1> name=NC_008402:4906561..4911489 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:4906561..4911489 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgaagcaacagatgattgacaatagtgccaaaatcgtatccccagatactgtgaccacatcaacacgctattgtcacaagtttgcagagttcatgaaaacaaggccacccacttttgcaggatcagccacatcttggtatactgaccaatggcttggcaccattgaaaacaaattagatatggtgcaatgcgatgagaagaacaaagtattctatgctgctcatcagttacaaggagctgcattggaatgttggaaaggttattgtgcaaccgataaagacccacaagccatcagttgggctgagttttcttctattttgcactatatggatgtttctccagggtttattaaaacaaaggaccacacaaaggatggtgtttgcacactctgcagccaaggctatcgctatgagctgatgtggtgcccacggaacaagccaagaaactgtgcatgtgctcgttgtggggagattggacacagcgccagcgagcacgaaatcagctgctctagctgtgaacaaagccatctactcggagagtgccccatgagcaagctcacttgttacctttgtgaaggtgatgatcatgtcccaattaaatgccccttgagttcaatactcactactgtgactcaacatcaacgagaagcttaccaagaagttatacaacaggtaataggagaaacaaataagataatagtaactccagttaagaagttcagagaagtagatgatagtagccttcaataccaatgtaaaaggggcagtgaatcagcatccaaagttgcatgctctgcttgtggtgagcaaggtgaagcagcctcctataaagccaagtgtatgtcaaagacacgaaaggcttcatcgaaaacgaaaaatgtcgtatgtttcagctgcaatgagatgggccattttgctaatcgatgtccacttagacatcagacacctgctcaagacaaaaccattccaaaagctattctgaccaagagaacaacaccaacaacaggtggtgaaggtaaaaaacgacgcaaattatag</cdnaseq>

Protein Sequence

<aaseq>MMKQQMIDNSAKIVSPDTVTTSTRYCHKFAEFMKTRPPTFAGSA TSWYTDQWLGTIENKLDMVQCDEKNKVFYAAHQLQGAALECWKGYCATDKDPQAISWA EFSSILHYMDVSPGFIKTKDHTKDGVCTLCSQGYRYELMWCPRNKPRNCACARCGEIG HSASEHEISCSSCEQSHLLGECPMSKLTCYLCEGDDHVPIKCPLSSILTTVTQHQREA YQEVIQQVIGETNKIIVTPVKKFREVDDSSLQYQCKRGSESASKVACSACGEQGEAAS YKAKCMSKTRKASSKTKNVVCFSCNEMGHFANRCPLRHQTPAQDKTIPKAILTKRTTP TTGGEGKKRRKL</aaseq>

Gene Sequence

<dnaseqindica>3731..4771#tcgagttgcaatcgattgctcgacccgctcccctcgtcttacacggcctcgtcgagccgcgccctaaccccccgccgccgccactgccggatccctcctcccccgagttcctcgccgagaatctaaggtactcatccaatccgaccacccctccccttctccccgtcctcaaccgcgttgccgtcgccgaccaccgctctgcccgccgctctccactgcttgtgttgcagggggggagatatcgcgctgccctcattttttttttctttcgaccgatgcatggaggcacggggcttgtctgcaatggattccatcgagatgaccttcggggaatacatcttctagacgaattcgaaacaatatcccccctaccctaaaccgatttcattatttctaaactttcttaagagcttgctgttgcttgaggcaggagaaaggacaggaagctgtaagcctggaatagaagctggaacaatacaagctaaaggtgagacgaccatgatgagctataaggcaagtaatgccattgatcatgtttgatcccattagttatgtgggattattcggatttggtaattctattttttgatgagatgacagatagttatgagctcaagttatcattaattataatcttcttgatactgaaaatgatattctttgattgacctaggtctaagaagtatagtattcatggattgatgatattctttgttagtagagaacactatgcacaatgatacacactcacacttaaatgtttatatgacaaatcatcactcataaatttgctatgctcaaactcctattgctgaaggtgaggtggttgtgaatggtggtcttatggtttgtggattgttgcctcacctgaagcattcgagaagaaaattgctatgctgaaacttctacagctgaaaatgaggtggttgtgaatgctggtcttatggtttttggattgttgcctcatctgaagcacttgagaacaaaatacccttgaatcatacaagtgataggattaaagtctatctttgaccaaaatacatctgatctcttcatgtcaaatagaagcgattccagctttcaaaaacacgcacatataggggcaccacttcccaaaacgaccagggtgcaacaagatctctcctgtctgacagttttctttaatattaacatggtaacctgaacaactaacggaacactcacacaccttaattagatcctcccaaattcaagatcaatcaaccaacttcagctctagcagcagtgcacagagtctctcttagcagcacacaccttaggttcactttgccacctcgaccatcttgatgattggtcttgctttgtctccggccttgccaggatttgccagtgttgcaaaaaggagaaataagtgcaaattgtagacgtaggacaactccctaccaattgctgccggaagaccatgttacttctactttttcagaagctcgaacagatgactccaaaaagactaatcaggaaaccctttttctttgatccagctcttcctacaatatccacaaataactcttctgtggacctggaccagtccgccctgtagaatctctctataaacgctccacacatcctgttctaaaagtaaaacacagcctcagctctaaaactgggtaaaactcgcccccaactcccaaaactaggtagacctttgttttctaatggttttggagttctacctagtgatatcagaggttgaggaacgagttttacccagttttggattatttgaatcaagagcttgttcaactagaagatcaatatgtcaacctgtctatactgctctcttggagaagtcctacaggatggggacttatcgtcatgctcttgtgtgaattgtaactctgaatggctcaccttggtttgtctctcacaatgataagttattattgcaatttattcgttcatcactcacttcgtgtctgtctttaagccatgctctaacatgtccttgctgctttgatgagtttctctagacaccatccatgtcagtttgtattccactatcatgagaatcatagttatcaaccaaatttgttttttcacataactaccgataggaaccaaagccacctttgccattagcctcattatagggagtattatacttggagtgcatatcaccatttcctagaacagtgtttctctattatctctgtcactaatgtatcatcatcatgccaattcattttgtgatgtcactaatctgtccactgcaagatgtgtgaatcgcccaaacctagttacagggatgtccttgtcctattgtcggtactctggcatagaactatgttgtcatcaccgcttcccattgtcagccatttctaactccactttgcctgaataatttagtcttttagaccgtcttgtctctgttccatgatcacaagggtgactgattttccaccgtcacaccactgtttgctggcagactgctgtcattttccttgctgtaatctgtgaacccattgtgttaggacatccttgagatttgaaaagctgtgtatcgggaggttgtactatcatgtcctggactgctgaacaagaaaaaaagaagataaaacgcaaattttctaaacttttagtcaagacaatgtcatatgtaggtcttgaccttcatataattgtcaattttacaaagcatttttaaaaagtttaaacttaattgttctgataccatgatccttttgtcatctttccagttcttcttttacattggattgaattattatcttattagtcaaccattagtgtgatatattattatttggaccatgtctaccctgtaacttctgtagatggtcaaaggagttatgttcccttagtttgactttagtagagtgtaaggcaatgaagagaccttatgtattagagaaaggatagctataagcaagctatgcttttgtggaagagagagaaagaaaaagtgggaagtggtggctctcatgcaagagctagctatatacatgcttcaagaaatatgcattaaattcataataaaagaaagagagaggaggaaaaaaatacagctaatatagctaacctattatacatgttgactctacaatgagggtgtgtttggataatgggaaatgaggggtgggattgggattgggaaatgaatgaagggttaggattaaatggatgagggagaatgaagggttaggatttaaagaggggtgtgaaatcatttcccttagacatttgccaaacactgcctgaacttatagctagttgtgagctctactattgaacttgctcttaccagcatccactttcagtgattagtaaatgcatttttgagtggtcataaggataagcttgtttagctgcattggaaccttaaatcattagaacataatattgtattttaatatatttttccttattttcttttgttctgaatcaggcaagtcttcctgattctgtttggtttattttgttttaaagtttaaatagcgatagaattatctcactcttatccatactttgtttctcaactacagaaccttggatgatcaacagatggtgaagagttgcattggcagccgcatcagtgaggttgaggtatcccatggcagtcaattatattaccaactccaacctgaatgttaacggtgattagcaaccatctttctgtccttgcagtgagccagtgacagttcaacaatctgatcaatttctccctagaaaaattatgatgaagcaacagatgattgacaatagtgccaaaatcgtatccccagatactgtgaccacatcaacacgctattgtcacaagtttgcagagttcatgaaaacaaggccacccacttttgcaggatcagccacatcttggtatactgaccaatggcttggcaccattgaaaacaaattagatatggtgcaatgcgatgagaagaacaaagtattctatgctgctcatcagttacaaggagctgcattggaatgttggaaaggttattgtgcaaccgataaagacccacaagccatcagttgggctgagttttcttctattttgcactatatggatgtttctccagggtttattaaaacaaaggaccacacaaaggatggtgtttgcacactctgcagccaaggctatcgctatgagctgatgtggtgcccacggaacaagccaagaaactgtgcatgtgctcgttgtggggagattggacacagcgccagcgagcacgaaatcagctgctctagctgtgaacaaagccatctactcggagagtgccccatgagcaagctcacttgttacctttgtgaaggtgatgatcatgtcccaattaaatgccccttgagttcaatactcactactgtgactcaacatcaacgagaagcttaccaagaagttatacaacaggtaataggagaaacaaataagataatagtaactccagttaagaagttcagagaagtagatgatagtagccttcaataccaatgtaaaaggggcagtgaatcagcatccaaagttgcatgctctgcttgtggtgagcaaggtgaagcagcctcctataaagccaagtgtatgtcaaagacacgaaaggcttcatcgaaaacgaaaaatgtcgtatgtttcagctgcaatgagatgggccattttgctaatcgatgtccacttagacatcagacacctgctcaagacaaaaccattccaaaagctattctgaccaagagaacaacaccaacaacaggtggtgaaggtaaaaaacgacgcaaattatagtcaaagggatgacgtttgcaagccaatatttatcatgaatatcactaacactagtaaaaatataaaactctagccatttgaaaatatatgcagttactttgttcctatttttaatataagcactcccgtgccaagagaataggttgcaaattgtgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0257766, RefSeq:Os09g0257766