Os03g0211400

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Revision as of 12:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0211400| Description = Calmodulin-binding, plant family protein| Version = NM_001055882.1 GI:115451492 GeneID:4332030| Length = 4776 bp| D...")
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Gene Name

Os03g0211400

Description

Calmodulin-binding, plant family protein

Version

NM_001055882.1 GI:115451492 GeneID:4332030

Length

4776 bp

Definition

Oryza sativa Japonica Group Os03g0211400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5835204..5839979

Sequence Coding Region

5837406..5839721

Expression

GEO Profiles:Os03g0211400

Genome Context

<gbrowseImage1> name=NC_008396:5835204..5839979 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:5835204..5839979 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccaaagtattggaaagaagaaattcatttggtggtagcactcctacgagttcagcttcaggttcaagaaaggatgagaaaacgacaccccattacctaagagcttctacaggttcttgccataatttatgcaaatatggacacaaaaatccttttgaggaagagaagaagctttcaacttcaggaggcagaagaaagaaacttcctagtcatttaaataatttgacgttgcacagatcagctatcttggatagatcaaaggatgtcaggcagagaaatctttctctagccaagtcgagtatatctctgggtgaatctgaccgcattgctcccaagaaaacacaagcaaatttgaaaggatcctctgatcatttgattacacgcacttcttcatcagctgatcataaaaacgtgaaccttgatggaagaaagaagcatctaacagttgcacagaagacttcagctgattcaggatcttccaatggagttcctaaatttgacaaaaaatcagcaatgccagttaagggaaccatagtgcctgccaagttgaagctggcagagatgccacaactggaggaatctagaactatggaaaaggtcacaacggtcaagcaatcatcaattaagagaccgacttcattgcctactaagcttaacttgattaagcaagtgcccgtgccatctcaggtttctagtcatctactttcttcaaaagctaaacgtactgtaaagggagagcttacatcttcaccagcaactgttactggtgtgcgtcgaagtaacagtgataaaactggaagaagttcgatgaattcaagcaagccaagtatcaatgggaaggaaggcttgcatatggccagatcatcattctctgtagaatcgaagatggatgtttctgttgtaatacaagaacatgatgtgcaagattcattcataagaggtcttcatgtggagtcgacactggcaggagtgtcttcagataccacagaatgtgttgatgaatctagatcagcaccagaagaaataattaggcctgtgtcaggggatgatgggatggaaagcaatcggaagaatgaagcatcaggagggaatgaagaacccctgcagagctccattgtaacaggcttgctgcaatcatcggatgatcagcaactcaagaatgcactgagcaatttagaggcagaagaaaaccaaacagacgatgcttctccttgccaatcatctaaaaactcgatagctgtggaaaatgcagttctgggcgactctctatcaaccgaaaatagttcagaaattgaagctgatggagtgaaagccaacgctagcatggagtctcaagacgctgaaggtaatgaagaagaggaagcccatgaaggccttcaagaatctatagaacagttggcactcggtgaaaaacatgctaaggagcctggatcttttcttggttccacctcaggaaatacagtggaagatgtcaaggctgatgaaatatttgagggttggactaataacagtccttcacactgccaaccaatttcagaaacttcatcagatggtgaacttctgggggagccaaagtctgtgcaaattcaaccaagtgattctactctacaaacagatgggttagtgatttctagtactggcaacacctttgaacaggatgaactgaaaccagggtttttccttcaacagtcacctgaagaactatcagaggatgaattttacgaagagtatgattttgagttaagtgaattagatgaatctggtacagaagatgaaggaccaacgatcaataaaaacagctatgatcatttaaaggctgatggacaacgaccaaaaagaatctcagcgcttgaacaggatgatgatagtgccacaccttacaaattgaaatttaagagaggtaaaattgttgaactccaaccagacagtaatggcccaagaaaactcaaatttagaagaagaagtgcaagtgaattttcaagcagtgaaggcctgtcagctagaagaatatataagatgaatagcacaatagatgctggaccttctaacctagatgtggaatctcctggtgtgaaactgcgacaccaagatacacaagagaagaaagatgcacaggggctgtttaataatgttatagaagaaactgcaagtaaacttgtcgagtcccggaaaagcaaggtaaaggctttagttggtgcttttgaaacagtgatcttgctccaggacggcaaacccgcgtctacaccacatgctggcaattcaccacatttatttcatgatgacgagggaaatgcatctgagcaagctgcatag</cdnaseq>

Protein Sequence

<aaseq>MSKVLERRNSFGGSTPTSSASGSRKDEKTTPHYLRASTGSCHNL CKYGHKNPFEEEKKLSTSGGRRKKLPSHLNNLTLHRSAILDRSKDVRQRNLSLAKSSI SLGESDRIAPKKTQANLKGSSDHLITRTSSSADHKNVNLDGRKKHLTVAQKTSADSGS SNGVPKFDKKSAMPVKGTIVPAKLKLAEMPQLEESRTMEKVTTVKQSSIKRPTSLPTK LNLIKQVPVPSQVSSHLLSSKAKRTVKGELTSSPATVTGVRRSNSDKTGRSSMNSSKP SINGKEGLHMARSSFSVESKMDVSVVIQEHDVQDSFIRGLHVESTLAGVSSDTTECVD ESRSAPEEIIRPVSGDDGMESNRKNEASGGNEEPLQSSIVTGLLQSSDDQQLKNALSN LEAEENQTDDASPCQSSKNSIAVENAVLGDSLSTENSSEIEADGVKANASMESQDAEG NEEEEAHEGLQESIEQLALGEKHAKEPGSFLGSTSGNTVEDVKADEIFEGWTNNSPSH CQPISETSSDGELLGEPKSVQIQPSDSTLQTDGLVISSTGNTFEQDELKPGFFLQQSP EELSEDEFYEEYDFELSELDESGTEDEGPTINKNSYDHLKADGQRPKRISALEQDDDS ATPYKLKFKRGKIVELQPDSNGPRKLKFRRRSASEFSSSEGLSARRIYKMNSTIDAGP SNLDVESPGVKLRHQDTQEKKDAQGLFNNVIEETASKLVESRKSKVKALVGAFETVIL LQDGKPASTPHAGNSPHLFHDDEGNASEQAA</aaseq>

Gene Sequence

<dnaseqindica>2203..4518#tctttccctcctcgagagaggagagaaaaagggtggcagaggcagggcaacccgcgtaccagccaagccaacccagcccagctgcgtcgtcaccatctcctcctcctcatcctcctccggctcgtccgccgccgccgccaatccgttgttccgagaggtacgatcttggcgggaggattttggtgcaagtttgttttgctttggttgattttggttcgcgttagttgtttgggatttggatgctacgagggttttcgtctggatcccgcgatgtggtttttgggctattggggattgattgtgttcagggaaatctggccgcggccggggatcaatttggtcgatgcgttttcttttttctttcttttttttaaagaaaaacgaggacagaattttgatgcgaaaaaggtgtatttctcatgtcaaattgttgacttgtacggtttatcgacctgatcattaccattttattaagttattcttgttatccatcgattgcactggcaatcttcagaacattattggcattctaaatttcgcttccagtgagtacctttgctcagattagtagtgtgttgagtgtcaagagtaaacatatgccgatgaaaagatgccatcttttagtttaatgtcttcatcactaggtgttcttttgtttccgtggggggttttgattggcatattgtgcttttactcatccaatccttggtctttctagctggaacgaataatggtgtatggtgtgatctagaacagcttggctagtaaaaggttgcttgtgttaatgaccagctagtttggttttttttttcccagaggaatgggatctcaaaaggtgtctctgcccaattaatcttttaaaacttttctgtttgacaaatactccagttgaatggtcaattggtcaaactacttttttgttccagagtagttcatgattcatccagaaattgttcatgtctccttgacctctttcctgtcaaattttaggcgaattctttatattgaaaactgctaaacactctccgataagtgctgcctgagaagcataaagttggaggatatttgctttcaggaggtatgatgcagatgtattttgtgtgttttttctcagtttgtgtttctgattctacctttgcagcttgctttcaagcacttcaactttgtggacagtagtaattacgcaactaagaaaaactaattttgatttgaactgctgagatgtgatgtgaattttttctgtatttactattcaattactcaatgaaccaataccaacctattgatttggagtggagttgtcctatagtttttttttatggaaattctattatagcgtacttgttattccaagatcacagctgttgccatggagagaaataccatagaaatggaatctgtgtggctacgtccaatttttttcttcaccaatatatagttgaggcatcctgtacaatcacatttaacttaccaatgaactgtcctacatccccctgtagctttttgttctttatagaatacacaatgaaactccctaaacatgattcaatcacacactaatgaaaaatacattgttctttgaaacacttctttcacaatttgttcattgcttttgatgatggggattgatactacaaaaatacactgccacttctataaaaaaatgaacccactgaaaagtttttcatttagttcatacttttgtgtactaagccacatcaatgaagtgaggtgataggaacttgcaagaaactgggatactagagtggcatactagccagcgtacaaagccatggaaaccatctaacacttagctatgtcagtaaatgtactggatctttgctacagataaattgttttgccccctaaatcagcgccaccatctcattttgcctatggtttttgatacaaatctgttttgcgatgtgcgactgtgatgataagaacatgtttctgcatgccaattttttggttgactataagctattagcatcaacttgcatgcatgctgctcagatgaacttggaactagtacaatttttgttgccaattattttcttagaattttcaggttctatttgatttatgttgaatcatgagaggctgtacaagttgtctaattaacatataatcttccctgcagcaattcaaaggaagatagccagcattgaatagaattgtctcggtttctcaaagtcctcaatgtccaaagtattggaaagaagaaattcatttggtggtagcactcctacgagttcagcttcaggttcaagaaaggatgagaaaacgacaccccattacctaagagcttctacaggttcttgccataatttatgcaaatatggacacaaaaatccttttgaggaagagaagaagctttcaacttcaggaggcagaagaaagaaacttcctagtcatttaaataatttgacgttgcacagatcagctatcttggatagatcaaaggatgtcaggcagagaaatctttctctagccaagtcgagtatatctctgggtgaatctgaccgcattgctcccaagaaaacacaagcaaatttgaaaggatcctctgatcatttgattacacgcacttcttcatcagctgatcataaaaacgtgaaccttgatggaagaaagaagcatctaacagttgcacagaagacttcagctgattcaggatcttccaatggagttcctaaatttgacaaaaaatcagcaatgccagttaagggaaccatagtgcctgccaagttgaagctggcagagatgccacaactggaggaatctagaactatggaaaaggtcacaacggtcaagcaatcatcaattaagagaccgacttcattgcctactaagcttaacttgattaagcaagtgcccgtgccatctcaggtttctagtcatctactttcttcaaaagctaaacgtactgtaaagggagagcttacatcttcaccagcaactgttactggtgtgcgtcgaagtaacagtgataaaactggaagaagttcgatgaattcaagcaagccaagtatcaatgggaaggaaggcttgcatatggccagatcatcattctctgtagaatcgaagatggatgtttctgttgtaatacaagaacatgatgtgcaagattcattcataagaggtcttcatgtggagtcgacactggcaggagtgtcttcagataccacagaatgtgttgatgaatctagatcagcaccagaagaaataattaggcctgtgtcaggggatgatgggatggaaagcaatcggaagaatgaagcatcaggagggaatgaagaacccctgcagagctccattgtaacaggcttgctgcaatcatcggatgatcagcaactcaagaatgcactgagcaatttagaggcagaagaaaaccaaacagacgatgcttctccttgccaatcatctaaaaactcgatagctgtggaaaatgcagttctgggcgactctctatcaaccgaaaatagttcagaaattgaagctgatggagtgaaagccaacgctagcatggagtctcaagacgctgaaggtaatgaagaagaggaagcccatgaaggccttcaagaatctatagaacagttggcactcggtgaaaaacatgctaaggagcctggatcttttcttggttccacctcaggaaatacagtggaagatgtcaaggctgatgaaatatttgagggttggactaataacagtccttcacactgccaaccaatttcagaaacttcatcagatggtgaacttctgggggagccaaagtctgtgcaaattcaaccaagtgattctactctacaaacagatgggttagtgatttctagtactggcaacacctttgaacaggatgaactgaaaccagggtttttccttcaacagtcacctgaagaactatcagaggatgaattttacgaagagtatgattttgagttaagtgaattagatgaatctggtacagaagatgaaggaccaacgatcaataaaaacagctatgatcatttaaaggctgatggacaacgaccaaaaagaatctcagcgcttgaacaggatgatgatagtgccacaccttacaaattgaaatttaagagaggtaaaattgttgaactccaaccagacagtaatggcccaagaaaactcaaatttagaagaagaagtgcaagtgaattttcaagcagtgaaggcctgtcagctagaagaatatataagatgaatagcacaatagatgctggaccttctaacctagatgtggaatctcctggtgtgaaactgcgacaccaagatacacaagagaagaaagatgcacaggggctgtttaataatgttatagaagaaactgcaagtaaacttgtcgagtcccggaaaagcaaggtaaaggctttagttggtgcttttgaaacagtgatcttgctccaggacggcaaacccgcgtctacaccacatgctggcaattcaccacatttatttcatgatgacgagggaaatgcatctgagcaagctgcatagatcatgtgtgcctttttaacattgccaacttggcggtcatgttttcagctttcttcttcttcttttttatttttttttctgatctggattaatgcagaggatgttgtgtagcttgtacattaaatttctttaacaagtaatattttctcaacaggtttagagtataataagtagtcaatgtacttgtaaatagtgatgtcaggtttatttcattgtaaatcaaatgagaagttataaaaccaagtgtgctttacttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0211400, RefSeq:Os03g0211400