Os03g0213900

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Revision as of 12:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0213900| Description = Conserved hypothetical protein| Version = NM_001055902.1 GI:115451532 GeneID:4332050| Length = 6489 bp| Definition ...")
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Gene Name

Os03g0213900

Description

Conserved hypothetical protein

Version

NM_001055902.1 GI:115451532 GeneID:4332050

Length

6489 bp

Definition

Oryza sativa Japonica Group Os03g0213900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5994551..6001039

Sequence Coding Region

5994678..5994739,5994881..5995109,5995212..5995310,5995424..5995458,5995536..5995611
,5996394..5996504,5996889..5996972

Expression

GEO Profiles:Os03g0213900

Genome Context

<gbrowseImage1> name=NC_008396:5994551..6001039 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:5994551..6001039 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacggaggaccgcgcccccaaggtccccgacgagcccgccgccgccgcggccaagcagaggaagaaaaggaagtgggatcagcccgcggaggatgtcgtcgccgcggcggcggctgctgctgctgtggcggggttgcccgtggtgaacatcggtgccctctccggcgtgtcgatcccgggagccgccggtccgttggggaatatagtcgctgtgccctatactttgccggtgcatctggcgccttcggtgctccagaccgccgcggcagcggtccagaaattgagtcaggcaaaaatgcctgatgagctaatagcaagagaaattgttataaatgacgccgatccgtctgtgcgatataagcttacgaaacggcaaactcaggaggagattcagagatgtacaagcactgtcatcattactaggggaagataccatccaccaaatggacaaactgatggtgagaagccactctacttgcatatatctgctgggtctcagctaaaagatactgctgagcgtatcaaagcagttgatcgtgcggcttcaatgattgaggaaattttaaaacaaggcccaaacccagaaggcactatccagagcaacggacagatccatcacttaacgttgcagcttgggttcgtggtccaaatgtatgttctcgtattttgtaaaatattaagcgttattggataa</cdnaseq>

Protein Sequence

<aaseq>MTEDRAPKVPDEPAAAAAKQRKKRKWDQPAEDVVAAAAAAAAVA GLPVVNIGALSGVSIPGAAGPLGNIVAVPYTLPVHLAPSVLQTAAAAVQKLSQAKMPD ELIAREIVINDADPSVRYKLTKRQTQEEIQRCTSTVIITRGRYHPPNGQTDGEKPLYL HISAGSQLKDTAERIKAVDRAASMIEEILKQGPNPEGTIQSNGQIHHLTLQLGFVVQM YVLVFCKILSVIG</aaseq>

Gene Sequence

<dnaseqindica>128..189#331..559#662..760#874..908#986..1061#1844..1954#2339..2422#agccaaaccctcctcagcaaccgcacgtttcaggctctcagccgccgcatcccatccgtactcgccgccgccgccgcctcgcccgtcggttcatatcgattcctgagcctcccgccggcgagcacccatgacggaggaccgcgcccccaaggtccccgacgagcccgccgccgccgcggccaagcagaggtgcgacctccctccctatcccttcctcgctcgctccctcccctgtcgccggagctctcgcagatctcccgccattcgccgcgaaatttctcgccacgcaacggacaggcgcatctgattttgcgtgggcttgtgatgtaggaagaaaaggaagtgggatcagcccgcggaggatgtcgtcgccgcggcggcggctgctgctgctgtggcggggttgcccgtggtgaacatcggtgccctctccggcgtgtcgatcccgggagccgccggtccgttggggaatatagtcgctgtgccctatactttgccggtgcatctggcgccttcggtgctccagaccgccgcggcagcggtccagaaattgagtcaggtgtgacaatgatgtatttttcgtaagtatatcaatatgtgttgattaggcaattcagcacacggttctaaaattttgtctgtgtacatcttgtttcttcaggcaaaaatgcctgatgagctaatagcaagagaaattgttataaatgacgccgatccgtctgtgcgatataagcttacgaaacggcaaactcaggaggaggtaaaattccttaacgagacaattgttatgtgcttcctgtacagggttaaacaccatttttgcgtagatcactttgtgatagcagtaataatgatttgctggatacttaacagattcagagatgtacaagcactgtcatcattactaggtaagccaggcaaaacgtagatgtgacttgtgactgcgatggtcccttttgatatttacttgctttgacctaaccaggggaagataccatccaccaaatggacaaactgatggtgagaagccactctacttgcatatatctgctgggtctcaggtaaatcttgttcatatcatcaaattgagcctccatgttatttcctgtcgtacctgggagctgttaattatttgaaatctgaattactaattttatctgaatttcttgcattgcaactattacataatcacataaactcatgtaaatggatgtttcgatgggctatccacattcattaactatctctgcaagtcttcattgaattgttttctctatgatggtggtgtcaatttatatgttcgtattttataagtaacagtgacaagtaccatgatttgataactaaattttgtatctgttactaccagattggctattacttctttagctccaagcctccaactaacatcaagtgttgggagttaggactgaattggtcctaggtttctgatttctgttcaactaggaagcttatatagtaatggagtatgcacctttgatgttataaatgttatagaacagtgattgcaacagtgtttttctttagaaaatcagatgctagttttctgaacctatgctgatgtttgatacagccaataattcagtatgcctgtctgtttggcacaacactctctagttgtgcaatggtgttctgctattctttcacagtgatatcatccatcattattgctgttgtaatttcaacaaaaaactacatggtccatgccatttatgttgcagcatgtttcagtgattgcttttagtatagtacaatacctgtagtacaaaagatcctttttatagcaagataatggtatgctaatattttcccccaactttagctaaaagatactgctgagcgtatcaaagcagttgatcgtgcggcttcaatgattgaggaaattttaaaacaaggcccaaacccagaaggcactatccagagcaacggacaggtcttcccttcatatctcagtctgtttaatatatgatatctaatggattaataggcaccaaaccaaatattataagtacacatgtcataatccatctctgttattcattaaatgtgttaatacatggtctggttagttcattcataattatgttgatgcaatcttgagaaggaaaataataatccacatatatggttggtgcttgtattattgtttcctgattaatatggaaccagttacagtgtagtttttttttcaaggggagcagataaataattactacttaacatatggcaattcttgttgagaaggctaacatcttccttttgatgttacaggccgttcatccttttagtgcctcaatatttttgggttttcatgcagatccatcacttaacgttgcagcttgggttcgtggtccaaatgtatgttctcgtattttgtaaaatattaagcgttattggataattcaaccatgccattgttgctattactgtcagtattgttttatgaattcagtccagttctgtttacccgtggaaaagaaaagaaaactaatcttgaagctttctctggcatcccaattgggatgggagaaactgtttttgtgctgctggtgcttctgatttctttatgcaggatcagtacataaatcacatcatgaatgaaacaggggtcactgttgtactcagaggaaaaggttcagggactccggtcaattgtcatgctgaaggtctgtagtttattttggtagctcttggaaactcgtgagttgggaagcatattacttctgttcctttgtgtaatgtctattgctatactacagcatcacaacaacctctacacctctacatctcaagtatgcatgtgaagaacctagaagctgcaaaagttttagcagaaaaccttctagatactatagcagctgaatttggtgcttccaggtctgtaagtttggaatttttgttttgtgaaattatggattcttttgctttagtatcgttcattataactgcccttataaaaaaatataaattgaaattttacatgatcagttggattttagttatacaaataccatgcttcagttatgctatgattagtcactaattcatcttctcttttcgtatttgcctcgaactattccttttttgttggtatcattatagttgtaccagtaaatgctttatttatcttgctgaatattagtactagtaaatgcattatctatcttgctgaatattagggtgagagggtcttatatccagacatttctaacccatttgcactcgcctgatcagtaaaacatggattgattctgttcttagagattgtatcgtaccacaaagttctaagtatattttcattttcttttgtatggcagaatttcttcttcaaaagtatatggtgctgttccacctccgcagcaattattggatggtgtacaaacgtcaggaacaataccagatgtacaccctactttaggccctaatgtgttaaccggagcatcacattcctttgcatctactggagctaatgcttccttagttgctccttcagtgacatctcaatctggggccccgtcttattctgtggtttcaccacctagtaacctgatatgtcctagtcaaccagcaaatggtgggacattttatggtggctatgggggcatttatccccaggcaactccattgcagcaggttgcattaacactcaagcatgcttcatcatcatcaacccaggttgtttcagcgacgtctacatcaacaagcactgtggcaatggtgaacccttgttcacacgcagaagcagataaacgctcacaaaggaggaaattccaggaattaccagtttcacagggcgcaaccacagaagttcaggtagcatttacttgaataggcaccactgctattgcccaaaattaatattcgattgaaatgagcagcagtgttacttcatttgcctatctcggacatctttatgtttccaccactaaaaaaaccatccacccatgaattcatttcccctgattcatgtcgaacccctctcttctctacaatgttggcgtagatgcccctcctgtctctctctccacaccattcttagtgttccatctcctacggactgccacgcaccatctttagtccactgatctaatatcatatgtacatggttttcaaagcatttgataccatagaaccctgtgaaattgatttcgattctatatacagttgatgttctgatggcatcgctacgtaagtccttgcatcatcctatttgaagatgtgatttcagtgtcattgtcgtaatagtgcttttaatatggtaatgtcttcaaagaaggaacttgtgctgcagaataagcaaatgtttttttagttcatgttatatattgcatatgcaaccacatgaacaaattgaatgtttaattatttactactgttgagaaatcataacttcatttatactagaaaatctacgattcaaaatgtgatgtgaaattttcttttcatagtggtccttcaatgtttaccagattggcacgttttttctttttccaagactgatttatctgctactgacgttttatttcattccaggtattttctctgaccttgtctgaagctcacagggtggtaatagaatgtgaatttttcacagggcttgttacaagctggagttttcaccaatggagtttaactgacgagagtcttctgcttctgaattggattattgcttgtattttttgatactacatgagtttttcaacccgtaaattgaattagcaaggcacagtcttctgcttctaaagtggatgactgcttgtactatcttgttactaaccctttgtgttcaagctgttgatgcccacaagaagacttcgtaaaggactgcatttttaccattccttgaatttgaaatttggtagtttcttaataggtttaggtacaatttggtcaagttttttccttccttttcagttggagaaataggttcaaccattaaagttttgcacgttaaagagttctcactcagtgacattcacaagtagtcctagaaaagcagaaacttcttagcctaatgaaacaatagtattaatgcagtaccttttgctttatttctttgtagacactttttatgaagtttccgttatgctctttagttatatgaactttagaaagatgtaagttaatctctataactctgcatggttaactgatatccatgtatgatgcttaccagtcataatgctttcaatttatggatttgtgctgtttatgcacaaattttgttgatttcatcctttatttgtatttcattgtgtactatttactctaatgcaaaggaatttgatggagaagtctttttgtttcatttttccagaactcacaacagaggtccaaatttgttaagacaggtttagacggtttaggtaacatgaccaattcatcgattgaacctccaattaaagttcagcctggatcaaatgggatgcttcttcaagatcaaccgcatgtttctgcacatccatctgcatccaagaacatgctgccgccaccaccaccaccacccaggaacatgctacccccacctcccaagagcatgcctccgccaccacctaagtttccttcaaatgagatgtcaagaaatgaggataggtgtgcagatttaaacaagccaatggcacctccgaagagcatgccacccccacctcccaagagcatgcctccgccaccgcctaagtttccttcaaatgagatgtcaagaaatgaggataggcgttcagatttaaacaagccaatggcacctccgagatccttggacgtgagttcagtctcaccaccaaatttgtattcagcacaattaccttcaaaggagcctagagtggtcaaacctggtggggcatctgtttctggtaatggtggaacactataatatcgttgttttctacatagtgacagaaccaatccatctttactgaacttctttggcattcatttgcagatactctgctgaagcttatggattatggagatgacgatgaagaggacaacatcgatgagacgaatagcgtgcttggagggaacccaacttccatttctgggcagaaaccgttttgggctgtgtgaaaaattagtttgttctgtactccaatgcaagttgagtgcaggtagagaatgttgcctgacctgatgcatcagctcaatgccattacgctaacagttcatcgctcaatgttctcagtgtgagctatgtacaatatccagttccttttcttttggggtggttcaaatgtcgacgtgatggtcatttttcttttgacatataatcctgtagaagctagtgtgatcaggcagggcaagggcacttgtctgcacgacattcagagtgctgatgatgcttaagccaatttttgctagcttctcttggatgctgtatgttgctggttttgttagtttggtgaccttgacttgtaagatcaatgcaacaaaaccatgtgttgatacataaataagatcccattttgacttcgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0213900, RefSeq:Os03g0213900