Os03g0214200

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Revision as of 12:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0214200| Description = Protein of unknown function DUF1675 family protein| Version = NM_001186384.1 GI:297721898 GeneID:9268873| Length = 5...")
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Gene Name

Os03g0214200

Description

Protein of unknown function DUF1675 family protein

Version

NM_001186384.1 GI:297721898 GeneID:9268873

Length

5227 bp

Definition

Oryza sativa Japonica Group Os03g0214200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6010850..6016076

Sequence Coding Region

6011043..6011458,6012070..6012444,6015376..6015790

Expression

GEO Profiles:Os03g0214200

Genome Context

<gbrowseImage1> name=NC_008396:6010850..6016076 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:6010850..6016076 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagggcttctcgagggacttgctgtgcggcatcggcaagggaggagacgggccccgcggcgaggtgaggccgcgcgtggacatggaggctgaggaggtggagctcaacctcgggctgtcgctcggcggccggttcgggctggacaggagaggggagaagctcgccaggtcgtcgtcggtcgcggccatcttggcggcgccgacggagccgtcggcgccgccgtccgggctcttcaggacgagctcgctgccgaccgtggccgccgcggaggcggcgaaaaagcagggtgtggatgaattgaactgtcgccgcccgagcggcggcgcggaggcggagcccgcggcggcgaggctgccggcgagcgggagcccgtcatcgggctcgtcggacggcgaagggcgcaggcttgaagtgaatatgacagacactctcatgagaacaagttcactccctgccggcatcgaggatgaatggaggaagcgaaaggaggctcagagtctgaagcgactcgaagtgaagaggaagagaattgagaggaggaactctctcacttccaacatttccaaagaggctgttgggcagatattagaggagatgaatgcaggagctgagaaagtagaaagttgcgatgatgttgctacaggcaataagaagacgggaggaaatgtgaaccatagcagtgatagaaaccgctgcactggacttcctccagtccaccgtgccacgtatactcaacaacgtggcagtctgtccggaataccaacaaagcatattccagctatgaaaggatctgctgatgccgaagagcacaacgttccatcggccgctactgagcaccgaaatggagcagccatagcaacaccgccattttcggcactggcggtgagggcagtagctcttgcttccaggggagagcagctgcgtgctacaggaagagttgcggcaagagccaagagcatgggagatgtggagaggatcatgatgcaggagatgccatgcgtgtgcaccaaggggctccccaatggcaagagggttgaaggcttcctgtacaagtacaggaaaggcgaggaggtgaggattgtctgtgtttgccatggcagcttcctgacccctgctgagtttgtgaagcacgccggaggtggagatgtcgcgaacccgcttcggcatatcgtcgtcaaccctatcccgccatccttatactga</cdnaseq>

Protein Sequence

<aaseq>MEGFSRDLLCGIGKGGDGPRGEVRPRVDMEAEEVELNLGLSLGG RFGLDRRGEKLARSSSVAAILAAPTEPSAPPSGLFRTSSLPTVAAAEAAKKQGVDELN CRRPSGGAEAEPAAARLPASGSPSSGSSDGEGRRLEVNMTDTLMRTSSLPAGIEDEWR KRKEAQSLKRLEVKRKRIERRNSLTSNISKEAVGQILEEMNAGAEKVESCDDVATGNK KTGGNVNHSSDRNRCTGLPPVHRATYTQQRGSLSGIPTKHIPAMKGSADAEEHNVPSA ATEHRNGAAIATPPFSALAVRAVALASRGEQLRATGRVAARAKSMGDVERIMMQEMPC VCTKGLPNGKRVEGFLYKYRKGEEVRIVCVCHGSFLTPAEFVKHAGGGDVANPLRHIV VNPIPPSLY</aaseq>

Gene Sequence

<dnaseqindica>4619..5034#3633..4007#287..701#gcggagaggcgcaggcgagggcgcgcgttccccgcaatggcggccacctagtccctcaaggaatcctcgtaagtcgcatcttcctctctctctctctctctctctctctctctctctctctctctctcgccgcggcgggcggcagcaatggcggattactcgctcggtcagttcttggctcaccaccgttggtgttcccctgtttcttggttcacgccaggcgcttcttcttcttcttctcggatgcgagagcttgctgtgattgctggctagctagcttgccggaatggagggcttctcgagggacttgctgtgcggcatcggcaagggaggagacgggccccgcggcgaggtgaggccgcgcgtggacatggaggctgaggaggtggagctcaacctcgggctgtcgctcggcggccggttcgggctggacaggagaggggagaagctcgccaggtcgtcgtcggtcgcggccatcttggcggcgccgacggagccgtcggcgccgccgtccgggctcttcaggacgagctcgctgccgaccgtggccgccgcggaggcggcgaaaaagcagggtgtggatgaattgaactgtcgccgcccgagcggcggcgcggaggcggagcccgcggcggcgaggctgccggcgagcgggagcccgtcatcgggctcgtcggacggcgaagggcgcaggcttgaaggtgcgtcatcgcttctctccatgggggcgtgtgctatctatctatctttagcttttatgatttcatacctaaccgatgttaattgcgattctttggtaatatatgctgctaattatgcaaattagacacgaattgtttgggtgaattcaaggtgaaatgcacattgggaaatgtgaaattgccctgccatatgtcatttacctgacgtcctggtggtaaataaagtttggattaagatgcttgggcgttggtctttggcaaagctaatgagatcttccatcactggtgcttcctcgttaacaccgaggactgtaatttcgatttacagcttaaattatccaacagtgaaattcgtctgttttacccctcttgaaaaaaaaaatttctgtttacaactgttgcttccatcatctaaaaatgtggttgctatcagtatatagtttttaggatcgtgctgctggcttggcaagtcagtttcaggatatctgttcttgtcaagtagccctttaagtcacatgacacgcgcaaaaagaatcttaatgggtattcttccttgttctgtaactttctaatttcacctgcagtagactttcttcagtactccttttataggaacgcctacaatctttttaacccaaagggtgaggatgggaattaagtaaatatggataactgctagaatggataactttgtagtgaactgaattcatagatcttattcaactaagcaatcagattcagcaagctttttttttttatccgtgaagattattaccacagttcagtgactagtggcaggacacgtggacgtggtgcagtgtttacagtgatgaacaaatgacgataagcactcgagattaaggaaaaatcatcttttatgtttctagattaaggaagactaattatgctttgcctttgctcaattcatagatactcttcctcacatgaaagaaacttaacactcagtcatcagcagttagcagaattagtttgagcctgggtagcatgcatggtagaaattgaagaagtctttcatacaactaagatctgaaatagtaattagatacagagtggttactggttaccaagtttcttctaatacatagtttctcttattacttaataatcgcactacttcaacagcagaaagaaacgtgtcctatgtgtggattcaagtgttaattggttgcatagcattttatttccaagggaggtgtgaacaccattttgttaacgtcaagaacatatttttgataatttgaaaattttaaaaatggtagttaaagtaaaatatatgaatttcaactctcaaatagaaactagctttttgggggaggcataatttttttatggtgaactaatcacacctcacttcttagtcaataatgattttgatccttgtaatgcaatctatgtatgtattcctctcattaatgacagcaagcaagagctttacatagacattgagttacgtctttggatggatgttggtaccctttgttagtggtagcctaacctaatgcggtgtttattttgaagcttccagaaataatacaagatgttctattagcatattagcaacaaaggacatcagcagatttgtttttgtgttactccgaataacaggtagcaaattcatggtggaaatgtacatggagctcgcaaacattggctaattatggagcaattcaagttgggttcagcgacggttgatgttaattacattttgtttcattatctaatatttaacaacaataatagcaggtgcaacagcacaatgtacatatgtaggtgttgaatcaaggttgatgctacctgggtagctaactaggctttagacgccaagcctcacaggcagctaatagcccgttagttgtgttgtatttttcaaattaccatataggtgtgatgatgtaagaatggagctttactcgcacattgtgcacactacattttaatgctgccatatatgatgagatgaaacaaaaataacattagaagacattcctaaattttccaattctagtgcgatttggtactagagtttgcatgttgcatgccctccccttccaacttgtcgctaacttctggttctgacattgcattagggctgtggacagtaagtaatctgaacctgcccagcatgagctcctagatgcatgtgaaattggtgagctgcaggataggcaactatctcctgcggtctgggaggattcagatattactttactactggtctggtttaagggaaaacataccatttttcctaagaaaagtgaattaggaaggattggtcgacaatagtaaagtccatagttggcgtcaatggatgtaatttcattgtcgcgcaaaagatgaagaccccttgactgtaacaacctagtggacttgcgttcaaaacagacgagttcgaaaggtcggtagagacagctcctatcaacggacaactgtgaaaaacaaaagatggtggaatgcagctattcatggaattggaccttactcttgcttatacaccaagtgaagtagtgctaggaatgtttctagaatctagaatcgtattagtaaagccttatgctcacattgcttttgaagtgtcttgttcttcccgttctaacctatcgtttagccagacatgccgatatattgttctgggcctattttgtcattgatgttgggccaattgtggtccgaactccaaacgccaaataaatttgatcggagggagtacattgcgtagctacgatattacatatttccaaaagaaaacaaaacatgcaaagggagtacgataagaatgttaccgaacaaatttagtttaacccatttctttcgggcagtttatctcatattctgaaacttacagttttctgtttaatttagaatatggcagattccggaacagtttaactaaccatgttttctctttcgtagtgaatatgacagacactctcatgagaacaagttcactccctgccggcatcgaggatgaatggaggaagcgaaaggaggctcagagtctgaagcgactcgaagtgaagaggaagagaattgagaggaggaactctctcacttccaacatttccaaagaggctgttgggcagatattagaggagatgaatgcaggagctgagaaagtagaaagttgcgatgatgttgctacaggcaataagaagacgggaggaaatgtgaaccatagcagtgatagaaaccgctgcactggacttcctccagtccaccgtgccacgtatactcaacaacgtggcagtctgtccggaataccaacaaagcatattccagctatgaaaggtaaaccgcttacgttttgtcgttttgcatttgttttgtcgttttgcattatagatacgtgaaaatattttcttgtcaatctagcttcaagcatgattgtttgatatgatattgcactattttgtagtttcatgttttgttctttatgcttgtcacaacttttgcccctccattatgttcatgtagatctctcatgtctgagggcttttagatgctcaatttatttatattgctctcatttgtgcgagtttcaagtcaaatgtcttgaatgtgaactgggcatggatggttggtgccagatactgttatgttgttagccgctgtgcgcaatgttttttttcctaaatggcagatcgactaaaataaattatgttgtaacaaatgcctaatttagtggcctggattgcatggccctgcctccggtcaaaggatggaaactacttccagacttgaaagtatggagggtccacacaaaacatgtatgacaaggatcaataggttatgttattagatgaaaatatcagcaattggtcatccttccttacttccttacttcctttcatgaggtttgcttatgtttctcattaaggcctgtttgtctgtccttccaggatctgctgatgccgaagagcacaacgttccatcggccgctactgagcaccgaaatggagcagccatagcaacaccgccattttcggcactggcggtgagggcagtagctcttgcttccaggggagagcagctgcgtgctacaggaagagttgcggcaagagccaagagcatgggagatgtggagaggatcatgatgcaggagatgccatgcgtgtgcaccaaggggctccccaatggcaagagggttgaaggcttcctgtacaagtacaggaaaggcgaggaggtgaggattgtctgtgtttgccatggcagcttcctgacccctgctgagtttgtgaagcacgccggaggtggagatgtcgcgaacccgcttcggcatatcgtcgtcaaccctatcccgccatccttatactgaacctctctgtcagctcactgctgctcttgcaagtgttactatagcttcagtcagcccttcaccttagcttcagaattcagttcagagtagaatctgattgtgagacttgtcttaatgttacaagtgtttattatgctaaggagacagcgggagatttgctcctgctgacataaaaagtggttaacatggctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0214200, RefSeq:Os03g0214200