Os03g0214400

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Revision as of 12:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0214400| Description = Similar to Digalactosyldiacylglycerol synthase 2| Version = NM_001055906.1 GI:115451540 GeneID:4332054| Length = 325...")
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Gene Name

Os03g0214400

Description

Similar to Digalactosyldiacylglycerol synthase 2

Version

NM_001055906.1 GI:115451540 GeneID:4332054

Length

3256 bp

Definition

Oryza sativa Japonica Group Os03g0214400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6021515..6024770

Sequence Coding Region

6021752..6022283,6022621..6022970,6023257..6023523,6023991..6024272

Expression

GEO Profiles:Os03g0214400

Genome Context

<gbrowseImage1> name=NC_008396:6021515..6024770 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:6021515..6024770 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgacaaggcgtcatcttgcagtatttaccactgcaagcctcccatggatgacaggaacggccatcaacccgttgttccgggcggcctatcttgcaaaggatggggatagggaggtcaccttggtaatcccctggctttctctgagggaccaagaattggtttacccgaataagattgtgttcggttcgcctttggagcatgaggcctatgttcgtcgctggattgaggagaggatcagtttcagaccttccttcagcatcaaattctaccctgcgaagttctctaaagaactgagaagtattctacctgttggagatatcacagaatgtattccagatgaagtggctgatgttgctgttctggaagaacctgaacatctcaattggtaccaccatgggcgcaaatggaaaaataagttcaggcgagtgataggtgtggttcacacaaattatatagcatatgtgaaaagagaaaagaatggacaagcgattgcctgtttcatgaagtacatgaacacctgggttacccggatttattgccacaagattatcagattgtcaggtgccacccaagatcttcccagatctgttgtgtgcaatgtccatggcgtgaatccaaaatttcttgaggtaggtaaactaaagttgaagcagctgcggaatggggaaatagccttcacaaaaggggcatactatattgggaagatggtgtggagtaaaggatacagggaacttcttgacctgctgtccaaatatcagagcaagttggtgggtttggaagtagatttatatggtagcggagaagattccgacgaagttcgaaaatctgcagaacttctgagtttggccgtgaaggttcacccaggacgtgatcatgcagatcccctgttccatgactataaagtattcatcaaccctagcacaacagatgtggtctgtacaacaactgccgaggcccttgcaatgggaaagattgtcatatgtgccaatcacccttcaaacgagttcttcaagcagttccctaattgccgcacctatgacagtggcgaggaatttgtacaactaacgctggatgctctagcagagcagcctgctccactgactgacatgcagagtcatgacctatcttgggaggccgcgaccgagagattcatggaagccgcggagctgaaccttcctatctcagcagagccaagaatccatcaaacatccaaggtctctctccctgcttttatgaggactcgtaaactgaaacagagcttggaggatgcatcagtttacctgcatcaagcactctcaggacttgaagtcacccgtcgcgccttcggtgctgttccgaagacgctgcaacctgatgagcagctgtgcaacgatctaggtttggctcccgccaagaaaaagaggttgaaattgaagctgatgacctga</cdnaseq>

Protein Sequence

<aaseq>MSTRRHLAVFTTASLPWMTGTAINPLFRAAYLAKDGDREVTLVI PWLSLRDQELVYPNKIVFGSPLEHEAYVRRWIEERISFRPSFSIKFYPAKFSKELRSI LPVGDITECIPDEVADVAVLEEPEHLNWYHHGRKWKNKFRRVIGVVHTNYIAYVKREK NGQAIACFMKYMNTWVTRIYCHKIIRLSGATQDLPRSVVCNVHGVNPKFLEVGKLKLK QLRNGEIAFTKGAYYIGKMVWSKGYRELLDLLSKYQSKLVGLEVDLYGSGEDSDEVRK SAELLSLAVKVHPGRDHADPLFHDYKVFINPSTTDVVCTTTAEALAMGKIVICANHPS NEFFKQFPNCRTYDSGEEFVQLTLDALAEQPAPLTDMQSHDLSWEAATERFMEAAELN LPISAEPRIHQTSKVSLPAFMRTRKLKQSLEDASVYLHQALSGLEVTRRAFGAVPKTL QPDEQLCNDLGLAPAKKKRLKLKLMT</aaseq>

Gene Sequence

<dnaseqindica>2488..3019#1801..2150#1248..1514#499..780#tctccccccattgccgccgccgcctgcgacggccgcgagctcatcccgagacgacgtctctagctagcatcgagcgttctttctctcctcgggctctcgttggtaagccctcgattccggtttcctcctgcttctcctccaacctgcccctcggattagtcgccagtttgttcctcgttagttcttgcagtaattatagtgctaagctccggttgtccgtcggcaatacgccggtagtccatgcaccagtctcgttttcatgggttttgttgtttgcagcaggcatacccctgtttcgctagctcaatcaatcatttcattgctactattttttttgttttactttgtatttaacgagtacttgcatctatgaaacaaacttcacacaaatttgatgctcatcaggttcttagttccaccttcttttgtgttttttttgttcagttgagataaggcaaatcaagagagcaaaattttggtggtacatgtggtgattctatgtcgacaaggcgtcatcttgcagtatttaccactgcaagcctcccatggatgacaggaacggccatcaacccgttgttccgggcggcctatcttgcaaaggatggggatagggaggtcaccttggtaatcccctggctttctctgagggaccaagaattggtttacccgaataagattgtgttcggttcgcctttggagcatgaggcctatgttcgtcgctggattgaggagaggatcagtttcagaccttccttcagcatcaaattctaccctgcgaaggtacattgatatattaacgcaaagagttcattaaccatttaaccctggaattctctattctttgtgagattttcttttaggtggttctgtacttgatatatcaagttctctatactttgtgggattttcttttaggtacattgatttatcaagttctctacaatactattgtcttctattttacttggaaaataaaatcgagtcaaattggttaaatatttaccgttgattgaacctgattaccttaccatggagttatggttaacctgggtcagttttgtcagaaactcaaccccctttcaggtttcagctaactttaaaaaaatgcagctcaatacagatgatgtggtgcatataccatttttatttgcactgttagcttccatctagtaatactcatatttatatcttttttttgctttagggattttcaagacaattaatacccttttttctttatgatgcagttctctaaagaactgagaagtattctacctgttggagatatcacagaatgtattccagatgaagtggctgatgttgctgttctggaagaacctgaacatctcaattggtaccaccatgggcgcaaatggaaaaataagttcaggcgagtgataggtgtggttcacacaaattatatagcatatgtgaaaagagaaaagaatggacaagcgattgcctgtttcatgaagtacatgaacacctgggttacccggatttattgccacaaggtaacatcaacgccatatataacaacagtgaagatcccaagaattatggtgattaatctgaggatgcattttgcccatttaatttatgttccaattttacatggcgtcttgatggaaatgaaaaatacaagagacatgtcttttcagatttttctgtctgaatgcatctggttgttttggcttatgctctattacatatttattgaatttgaagaaccccaaactcccataatcatcatgtccttattaaagcatgcaatactgacttttgttgattttagaacagattatcagattgtcaggtgccacccaagatcttcccagatctgttgtgtgcaatgtccatggcgtgaatccaaaatttcttgaggtaggtaaactaaagttgaagcagctgcggaatggggaaatagccttcacaaaaggggcatactatattgggaagatggtgtggagtaaaggatacagggaacttcttgacctgctgtccaaatatcagagcaagttggtgggtttggaagtagatttatatggtagcggagaagattccgacgaagttcgaaaatctgcagaacttctgagtttggccgtgaaggttcacccaggacgtgatcatgcagatcccctgttccatgagtgagttctcttattgttcaaaaacttccttccgtcttcttaattatttgaatgaacatgagcgtacaactagacaagtttaaccagctacttttttcattgttgttcaaaaatgagtttgagggttacatatcattataattcattgcaacaatgcaaggttactgaactaaacaaaacgttgaacacaggctacataatgaggtaagacaagaaactgagagtgctaaatcacctaggaatgcaatataactcataatatattttgtcatctatattacattcagcatatggcaatggtttgtgtggatactgaaacacttcaatttcccaacagctataaagtattcatcaaccctagcacaacagatgtggtctgtacaacaactgccgaggcccttgcaatgggaaagattgtcatatgtgccaatcacccttcaaacgagttcttcaagcagttccctaattgccgcacctatgacagtggcgaggaatttgtacaactaacgctggatgctctagcagagcagcctgctccactgactgacatgcagagtcatgacctatcttgggaggccgcgaccgagagattcatggaagccgcggagctgaaccttcctatctcagcagagccaagaatccatcaaacatccaaggtctctctccctgcttttatgaggactcgtaaactgaaacagagcttggaggatgcatcagtttacctgcatcaagcactctcaggacttgaagtcacccgtcgcgccttcggtgctgttccgaagacgctgcaacctgatgagcagctgtgcaacgatctaggtttggctcccgccaagaaaaagaggttgaaattgaagctgatgacctgatgatgtaacttctcttgagcccctgattgcatcgtgtcatttccttttctgcacattatatccgaggagtatgtatgaatcctaatggaggatcagtgcattttccattagtatgtttacttagttcaggatgtaaattacactacaaatgtaattggactattggagactttggagtactagtactactaacctagtggctttattgaaaatttaaaactgtgatgtgattctgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0214400, RefSeq:Os03g0214400