Os03g0217200

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Revision as of 12:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0217200| Description = Cyclin-like F-box domain containing protein| Version = NM_001055925.1 GI:115451578 GeneID:4332073| Length = 6932 bp|...")
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Gene Name

Os03g0217200

Description

Cyclin-like F-box domain containing protein

Version

NM_001055925.1 GI:115451578 GeneID:4332073

Length

6932 bp

Definition

Oryza sativa Japonica Group Os03g0217200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6194343..6201274

Sequence Coding Region

6194532..6194601,6195268..6195371,6199611..6200450,6200524..6200676,6200764..6201132

Expression

GEO Profiles:Os03g0217200

Genome Context

<gbrowseImage1> name=NC_008396:6194343..6201274 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:6194343..6201274 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggactgctggggttgaatcggctcatgtccatacagcgggagcagcgctgtcgccaaatcgaagccaatcgtcttcttgcatccactgataaaagaaaggggtctccctgcaaacaagataattcccgatgcagcaaaagagagagatattctcagccagaccttccggaggacatttggcgccatatacattccttactgtcacttcaagatgctgcccgtgctgcttgcgtgtctcgggcttttctatgtttatggaggtgccgtccccacctcaccttcagtttgcaaactctgggcttgagtgaaatggcatgtaaaaagggtggaatagctagagattacaataaaaaagttgaccgcatactgaaaaaacactcaggcacaggaatgaagaaatttgagatcgaattctatggtccttcaaatgcaaacacctattatcatctcaataattggcttgagattgctattacatctggaattgaagaactcacccttaggttgactccagatgtgacaaagtacaacttcccttgctcacttttatctgatggaagaggggacttgattcagtctcttcacctttcccactgttccttccgtccaacagttgaggttgttagcttgagaagcctgacaagtttagatctatgtttggtgcgtattacggatagagagttaggaattctcctttccaattctttagttttggagaagttgggaatcaaatactgcgacaagattaattgcctgaagataccttgtgttctagagaggctcagttcactggaagtgtttgaatgttacagcctacaaatggtagagagcaaagctccaaatttatgcagtttttgctttggaggtgaacaggtacagttctcaattggagaaccgctgcaaatgaagaacctgcaagtgatcttccccaacagtatcagttttggccgtgctgaacttccatttagtatgcctaatcttgaaactcttaatatcagttcacgttgtgagatgtcccatacaccaactgcacctggcaaattccttcacctcagatacttgagtattacttttgcgggatggagattttcacgtgcctacgattatttttctcttgtttcttttcttgatgcttctcctttgttggagactttcatcctatgtattttacagaaaggaaagcatgacttaactttaagggatcctatatatccaaggcaaatgtctgaacgccagcatgacagcctaaagaatgtgaagatcaatggtttcagttccacaaaaagcttggttgagctaacatgccatattcttcagaacacaacttcgcttgagtgccttacattggacactactcgcattgagtttcggtgttctgatagtagtgttgatgtatgtctcccatcggacagggatgctatcaagggagcgcataaagcgctcttggctatcagaacatatattgagggtatagttcccgctacagtcaagttcagtgttctagagccttgccgccgttgctacgcttggtaa</cdnaseq>

Protein Sequence

<aaseq>MGLLGLNRLMSIQREQRCRQIEANRLLASTDKRKGSPCKQDNSR CSKRERYSQPDLPEDIWRHIHSLLSLQDAARAACVSRAFLCLWRCRPHLTFSLQTLGL SEMACKKGGIARDYNKKVDRILKKHSGTGMKKFEIEFYGPSNANTYYHLNNWLEIAIT SGIEELTLRLTPDVTKYNFPCSLLSDGRGDLIQSLHLSHCSFRPTVEVVSLRSLTSLD LCLVRITDRELGILLSNSLVLEKLGIKYCDKINCLKIPCVLERLSSLEVFECYSLQMV ESKAPNLCSFCFGGEQVQFSIGEPLQMKNLQVIFPNSISFGRAELPFSMPNLETLNIS SRCEMSHTPTAPGKFLHLRYLSITFAGWRFSRAYDYFSLVSFLDASPLLETFILCILQ KGKHDLTLRDPIYPRQMSERQHDSLKNVKINGFSSTKSLVELTCHILQNTTSLECLTL DTTRIEFRCSDSSVDVCLPSDRDAIKGAHKALLAIRTYIEGIVPATVKFSVLEPCRRC YAW</aaseq>

Gene Sequence

<dnaseqindica>190..259#926..1029#5269..6108#6182..6334#6422..6790#cgtctcctttggttagtgccattggtagccccgctcggcgacgccgacgcgatttcctctcctcgcgccttactgaattcgaaacgaaattgtagatcatatagcagagagagagagagagagagagagagagaggaagcagacgcggaccccttgatttctcggctagatctgagatatcatcgcatcatgggactgctggggttgaatcggctcatgtccatacagcgggagcagcgctgtcgccaaatcgaagccagtaagccgcatgttggatctgtgctactgctatctgcatcttgtgtttccccccctttttttttttatgtgttatataacttctccaatacaattaaagctggttgctacgctttatatcttacagaaagacaggactcagccgccaccagtctgttcttccttacaaaaatcctcttcttgatgtgcttgctgttttttcatggtttttgtgagcttcaaagctaaccttgttacaagcttgttcctttttttcacgatagatgttgtcatagttagaggagctgggattatccacccaaacacaaaatttggcatactgtattttaatagtgtgcgactatatgaggaggttggacacttggacatggaactcacggggggaggagagcagtggtggctgagaaaataggaattccacttgctgtcggctgatgagctccacggtattagagaaaaagtcacaccgttttgcaaaagaatacctctgctcaattggcggagtttttttcccattaatatactgtagtaacaagttgcagcttaaaacagttactaagtaggataatggatcattgaatctgtgtgtatttcagtgctttgatgccttcatctgtttgttttcttccaattatatacacaatgtcataaccattgtgtgttgcagatcgtcttcttgcatccactgataaaagaaaggggtctccctgcaaacaagataattcccgatgcagcaaaagagagagatattctcagccagaccttccggaggtacaccataaaaaccaaactgtcacaaaacgtgtcgttttggacataccttttctcaagcattcaaaactttgaaaataaatatctttatgattttttgcttgcatacatggacttgaatgtctaaaaaagtaatatcataatcttatcgtgtagtcgtgtactacaaatctattataatgtaacttagtagtcaatattgtgtttgagagaccatgttggtgtccaaaacggcatgcttttgtgagcggatggagtaaactatactaaagtgtcaccattgctgctctagccacaaccacaaagtgttgggtcagttctaataaaatagaaattcctgaatggatcttgtagtgctgcaatcttgtactatcgtacttttttatcggcataacaaattctttataagctatcgtgtactttaactcctgcagataactgtttgttatgagtcttagatttctagtatcttgatacgcagtagacttcccgagctatttcacttattaactagccatttggtcgtgcgttgcacgactttagatacctgtagaaaagttctatatttatgggtcataatatatcatattatgaaattgtcccttccctcaatcaggggtatccaatttttcctgtattttcatgtctcgcatctttagaagcctgctccaagttcgcataaaaagatggccctgaaattgacttcaacaggtgttttgagaattttacttcaggctccatcttgttccatgcttgccacagcgctattgttaaatctgtatctcataaccggataagagtacaatctgatccatgcatctcaaaattaatgggacaccttctggtttctatgaaatcacaacctggaacatggcaggtgcaaagggctaggcattcatcacaaccgcaacataggagcaaaccttttggttcctttcgccgtttctataggcgagctggctgggtaaaggaagcccagtatacatataagccctgtaaacgtagaccataatatgataataggattaactctaaatttatttttcttaaaaaaacatacgacttggtaaatagttagttagaactaacctatatttgcaagtaaggttcaagtaccatgttgaagatcttttggtttccaaagttcagtcatctcatccagtggctagtacatgcttattccacaatattttctcataaaatacacaataatttaatttatgacattgaaagggaccggacaaacaattagttaaattctgaatctacgtgaaatcaaccattagtttctcgtgaaacttataatggcaccattagaccattgggccaacaaaatattaaatctaaagtaggtgctttctaaagttgactaataataataattatcatgcttgcacaagacgcaacctaaatgtaggtagaatttcacttccaggttgttacatagtatgcactgtactaagcattataagtttgaagttgataagcaatccacatggttgaacacatattagaaagttagaatcggcgtctctgaagttctgagattatttgtacattttagtaccgagaaaaatattacctggtttggatggtgccagcttccttgttggtaggatctgcaagttccaaaactctcaaattttaacagaggagatacttttatggttttacctttggggagataattgcacctgttgcgtctgtaccatcatttgggggtgtttctatcataggattcaaagtatatatttgggggaggaagtgaagccaaaacgttcagtatgaaatggttagtatctaacctgtgaaaaagatgatcccaataccatttattttgggacgtatgttcagatgtcatctgctaaaccagtggaatcatagctaaaaaacaaaaggttgagtagatacattccaatttggttaaatgggtatatacaacattccaatttgattaaatgggtatatacacaaaagtttgggtggtttctagaaatttcgaaaattatctttggaggcacaattgaaatgctttcttaatagaatttgtgcgaagaaaataaaaaggacttgatttgatgacacattcaacaacaataaatttcttgttctatcaaacaatagcattcctcaacaactcctatccagtttttaccattcaagaagtactaatgttcatgattcataccctagatgcatggtagcaagttgaataaaaaatgaaaccacaaattttgaaaggacatttatttcataactatcacttcgggtaaagacaaataacgcaaatcaatattacagacatttcaattcctgctttaaaactcgtaacatcaagaaaaagaaatacctgataatacaatatttgattgctttattatttgcttcataagtcatcagaattcattcttaatcagtgaatacacttcacagcaaactggaaactaaatgggtacttagagtcaaatacatttgatctttagtagtcaaatttcatttaagcttaagcaaatcaccttgtagttgtagaattatcttttataggtttccactcccctgcttgctgcagctttgctcgttagacacacatatatagatacacaaatatagcaatacaccagtcatttatataatgttaggagcaaccttttttttttttctaaacacatgaatagctagtagtgttggggatggggatgaggaggaatagggcagggggaggtggaagcggagaaaggggaggtatggattcctttgcttcccaccgcaggcgtctttgaccggccagtccccgtacatctatcctcatccttctcgatgccggtggctcttcttcttacctctccccattgatgtggtggagattgggaggagacatggcggctttggagatggggggaggacgatgcacatcagcggggaggatgggagtggaggaagcggtgatgggattggggaggaggaggcgagccgagtggcagcagcggaagcgcggagcacacgatccggcgcctccgcctcccgggagtggggcggcgcagcgactagggaaaggggaggcggcctcccgagatggtgtagtaggggtgaaaatgaatggtaagactagggaggtggaaggatcttattgcgaaagaatttttacgaaggatctagaatagatttttccaatcaatgaatccaacagctcacatcatctgtaggggcaatcgggcggcttatgtttttttgatgacgtggcgcaatctggtggtaaaaaactttacttttttcactactttagatagggttttgagcttcttttgttgtgacttctgtgaccgagatccaaaatcctgctgtaaggcgtatcaaaaccttctacagcttgtcctcggcttcccacaactatatgtgtggtttatgggatattctcatccagctcataaccaactttggcaaaggaggtccggcacaccaatctttgaagaacacttccttgatgattttcagatcaataaatattccattctcacgtggcaagtggcaactcttaatactgtccataatttgggtgtttgaattgaccgattatatgcctgttgatgctttccatactgcttccactacataagtagtatggtatacattgcgatcctaggtaaactgccagcatatgatctcattttctgggctatccattttctcaaactcaagaagatatgccattgtgagttcactagaatatgcagacaaaacagttgtaatatctggcaatcacaatctttcttgattacaagcagccacatggtgcttgctcttgcaactgtttctagaattttttcagtgtttggcaaattacctttctttcaatctaggttcagatgataatggtaatgataatgttctgaaaataaggaacaatttggagacactggacagttggataacatctattgtctaaccatagcttgattatcaaacaaactttgatgctcatgaatttacctttctagtacaacttaaaatgaaagcacatcatggtacaataaacgcatactgacctatggactgctcttctctacggaacaattttgcttccaattcaatatgtacctctgcaatgcagagcattttacacaaccatgtgccaccttgctacaatgctacgacatatattgttttgctttctctaattgagttgattgtttgcttctaaaattccaatgttatactttactcaaatgcttgtgcatgcaggacatttggcgccatatacattccttactgtcacttcaagatgctgcccgtgctgcttgcgtgtctcgggcttttctatgtttatggaggtgccgtccccacctcaccttcagtttgcaaactctgggcttgagtgaaatggcatgtaaaaagggtggaatagctagagattacaataaaaaagttgaccgcatactgaaaaaacactcaggcacaggaatgaagaaatttgagatcgaattctatggtccttcaaatgcaaacacctattatcatctcaataattggcttgagattgctattacatctggaattgaagaactcacccttaggttgactccagatgtgacaaagtacaacttcccttgctcacttttatctgatggaagaggggacttgattcagtctcttcacctttcccactgttccttccgtccaacagttgaggttgttagcttgagaagcctgacaagtttagatctatgtttggtgcgtattacggatagagagttaggaattctcctttccaattctttagttttggagaagttgggaatcaaatactgcgacaagattaattgcctgaagataccttgtgttctagagaggctcagttcactggaagtgtttgaatgttacagcctacaaatggtagagagcaaagctccaaatttatgcagtttttgctttggaggtgaacaggtacagttctcaattggagaaccgctgcaaatgaagaacctgcaagtgatcttccccaacagtatcagttttggccgtgctgaacttccatttagtatgcctaatcttgaaactcttaatatcagttcacgttgtgaggtatgctctacacttatgcttacagcagtcgccacgctctgatatataattgttctgagtcatctttatgcagatgtcccatacaccaactgcacctggcaaattccttcacctcagatacttgagtattacttttgcgggatggagattttcacgtgcctacgattatttttctcttgtttcttttcttgatgcttctcctttgttggagactttcatcctatgtgtgagttactattcattctgcaaggcatatttagtaactgtgccatttataatttattgacatatcatcattggttttcaccttcagattttacagaaaggaaagcatgacttaactttaagggatcctatatatccaaggcaaatgtctgaacgccagcatgacagcctaaagaatgtgaagatcaatggtttcagttccacaaaaagcttggttgagctaacatgccatattcttcagaacacaacttcgcttgagtgccttacattggacactactcgcattgagtttcggtgttctgatagtagtgttgatgtatgtctcccatcggacagggatgctatcaagggagcgcataaagcgctcttggctatcagaacatatattgagggtatagttcccgctacagtcaagttcagtgttctagagccttgccgccgttgctacgcttggtaactatgccaaatcattgtaattaaacagtatttaattgtgtaacttcagatgcgttgtgctttctgttttaaaatcagtggtgtactggtgtccataaaaatgctgaggtatgtgctttggtttattattaatctctttctgt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0217200, RefSeq:Os03g0217200