Os03g0218400

From RiceWiki
Revision as of 12:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0218400| Description = Similar to Hexose transporter| Version = NM_001055931.1 GI:115451590 GeneID:4332079| Length = 4753 bp| Definition =...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0218400

Description

Similar to Hexose transporter

Version

NM_001055931.1 GI:115451590 GeneID:4332079

Length

4753 bp

Definition

Oryza sativa Japonica Group Os03g0218400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6260877..6265629

Sequence Coding Region

6261235..6262207,6262312..6262434,6264312..6264633,6265409..6265538

Expression

GEO Profiles:Os03g0218400

Genome Context

<gbrowseImage1> name=NC_008396:6260877..6265629 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:6260877..6265629 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgggagggttctctgtgtcggggtccggggtggagttcgaggcgaagatcacgccgatcgtcatcatctcctgcatcatggcggccaccggcggcctcatgttcggctacgacgtcggtatctcaggcggagtgacatcgatggatgacttcctgcgcgagttcttcccgacggtgctgaagaagaagcacgaggacaaggagagcaactactgcaagtatgacaaccagggcctgcagctgttcacctcgtcgctgtacctcgccggcctcacggccaccttcttcgcctcctacaccactcgccggctcggccgccgcctcaccatgctcatcgccggcgtcttcttcatcgtcggcgtcatcttcaacggcgccgcccagaacctcgccatgctcatagtcggcaggatcctgctcggctgtggcgtcggctttgccaaccaggccgttccattgttcctgtcggagatcgcgccgacgaggatccgcggcgggctcaacatcctcttccagctcaacgtcaccatcggcatcctcttcgccaacctcgtcaactacggcaccgccaagatccacccgtggggatggcggctgtcgctgtcgctggccggcatcccggcggcgctgctgacgctgggcgcgctgttcgtggtggacacgcccaacagcctgatcgagcgcgggaggctggaggaagggaaggcggtgctgaggaagatccgggggacggacaacgtggagccggagttcaacgagatcgtggaggcgagccgcgtggcgcaggaggtgaagcacccgttccgcaacctgctccagcgccggaaccggccgcagctggtgatcgccgtgctgctgcagatattccagcagttcacgggcatcaacgccatcatgttctacgcgcccgtgctgttcaacacgctcgggttcaagaccgacgcgtcgctctactccgcggtgatcacgggggccgtgaacgtgctgtccacgctggtgtccgtctactcggtggacagggtggggaggcggatgctgctgctggaggccggcgtgcagatgttcctgtcgcaggtggccatcgccgtcgtgctggggatcaaggtgacggaccggtcggacaacctcggccacgggtgggcgatcatggtggtggtgatggtgtgcacgttcgtgtcctccttcgcgtggtcgtggggcccgctcgggtggctcatccccagcgagacgttcccgctggagacgcggtcggcggggcagagcgtcaccgtgtgcgtcaacctgctcttcaccttcgtcatcgcgcaggcgttcctctccatgctctgccacctcaagtacgccatcttcgccttcttctccgcgtgggtcgtcgtcatgtcgctcttcgtgctcttcttcctgcccgagaccaagaacatccccatcgaggagatgaccgagagggtgtggaagcagcactggttctggaagcgcttcatggacgacgccgacaaacaccacgtcgtccccaatggcgggaagagcaacggcgccaccgtttaa</cdnaseq>

Protein Sequence

<aaseq>MAGGFSVSGSGVEFEAKITPIVIISCIMAATGGLMFGYDVGISG GVTSMDDFLREFFPTVLKKKHEDKESNYCKYDNQGLQLFTSSLYLAGLTATFFASYTT RRLGRRLTMLIAGVFFIVGVIFNGAAQNLAMLIVGRILLGCGVGFANQAVPLFLSEIA PTRIRGGLNILFQLNVTIGILFANLVNYGTAKIHPWGWRLSLSLAGIPAALLTLGALF VVDTPNSLIERGRLEEGKAVLRKIRGTDNVEPEFNEIVEASRVAQEVKHPFRNLLQRR NRPQLVIAVLLQIFQQFTGINAIMFYAPVLFNTLGFKTDASLYSAVITGAVNVLSTLV SVYSVDRVGRRMLLLEAGVQMFLSQVAIAVVLGIKVTDRSDNLGHGWAIMVVVMVCTF VSSFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHLKYAI FAFFSAWVVVMSLFVLFFLPETKNIPIEEMTERVWKQHWFWKRFMDDADKHHVVPNGG KSNGATV</aaseq>

Gene Sequence

<dnaseqindica>3423..4395#3196..3318#997..1318#92..221#atcgtctccatctcctgcttgctcttggtagctagctagtggagatcgccggagaggagagagacgacgagagagagagagagggggcaagatggcgggagggttctctgtgtcggggtccggggtggagttcgaggcgaagatcacgccgatcgtcatcatctcctgcatcatggcggccaccggcggcctcatgttcggctacgacgtcggtatctcaggtatatatctacgcacggccggccgccggcgatgtccgaacatggccatggccggctttgatgtccttctgttgattagttggttcatctcgattattcatattggtgtctcctgcttgaaattgagtgagattcctcttgcacgtgtgtgttatcggtttgatctgtctacatatttgtgttatcttgctatggataagcacatataagcgcaaagattaaagcgaaacggatgattttatccttgtcattaaatacctaccatttacagaggatcaaaaaagatcttgccattttattgagtccatttggtgcaattttatcctttttcattagtttccggcttgtagtgctcctacagtccagctagtagtatgattttcttgaggatcccaaagcattaaaatttttagatgttattttagagaaggaatcgagtgttatgagctagccacctgctttgacaggctggtaagtcaatgcatttgtttatccacggatcacgtttcttgcaactctctcagctttctttcctaattttgtgtggccatgttccctttttacatctaagacaataaattccaattaaaacggaaaaaaaatcttatccactctctgattcaaccttttccatggcgcactaacacaacattttaaaacattccaagttcatacttatacatgccatttttgccacaatagatgacgaactttacgacttatgaaactaaataatatccgttgaaaatcttgtgaatttctttttcttggttaggcggagtgacatcgatggatgacttcctgcgcgagttcttcccgacggtgctgaagaagaagcacgaggacaaggagagcaactactgcaagtatgacaaccagggcctgcagctgttcacctcgtcgctgtacctcgccggcctcacggccaccttcttcgcctcctacaccactcgccggctcggccgccgcctcaccatgctcatcgccggcgtcttcttcatcgtcggcgtcatcttcaacggcgccgcccagaacctcgccatgctcatagtcggcaggatcctgctcggctgtggcgtcggctttgccaaccaggcaagcaactttccaataatcttatcgttacaggcttacagcattatatcatttcatataataagctatggagttaaacaaagtcattacgccttatactattgttttcactcataatttgcacggatatttccatgttccttttttcgtcctgtactttcttcgcaacatcatcttctttgattccatatattattgactagtactaatataaactgatactactcacttgagtccaaaagtcttagcacagagtttaagtcaaacatataaagcggtggctggtttgagaatttgcatcacaagcaagccgaattttctgcttccatgaaaacgacgtgcgttcctgcctgcctaatactcctatatgaaccaccgtcctgattagaatttttatactcgagtcgagcatatacattactaaaaattatatttttatacgtatttcttatggcgtcggatactggggtagttagtactgtacttaaacacggggcccttcgtaattgccgtaattttggggtcaaacgcgtagaagtatgggcatatatatacatggatttatggacacctcggccggtgccgagagagtcttgatcgtgcatgacttgtgttcgtctacgttgacatcttccattggcagcagcatgcgtgtgataaactttttaagttccaagattccgatgtcctcgtgactctcctagtttaggattagccacgcttcttaattaatccttactgaacctggctaaattacccattttttgttgtccaagtttgtagtcgagacgtctgaagaagttgcagccaaccaagaggcgataggtgtgcatgattttacagccggtagttttgcgtgtggctgcctgctatctggccgtcgcagttgttatcaacggaggaatcgacctgtgtagtgtagcaacagacttgtgtttgtcacgtttgttggagattggtcagctttgttgactgatctttacagcaacttctagctagttacagccacaactgtcaagtcctcaatggatgcagcttggaatacacacatgctgttgcagctttggcttgctctggtttgatttttaagcagaggctgctatggctgtccacgcatatgccacacgggtcgcaatatgtagacctttggtttggttcactgagttttgggctgcaaagtactagttggctgctagtgtgcttgattggtaggagagtaggagtagtacttaatttgcttggcttcttctgaatttattcgtgtctaatagatgaaacagtagtttacatattacgcacactcgccaacatatgggacgtctagactcaattatgaagctgccaagacaataaactaaatatgcaagaggtttagtacaggacagagttcatgtgatcagttattcagtcaccacctaacaagactttgatggaggcctaggttcaacaaacattagagtggtagcagcagtcagcagacactatcgtactcgtagtagtagtctaatactaccatatgtacaactactacggtttgttaattccacctctaccgatcagcccccttgattatggttaagataacaaaaactatcttctctgaataacaaaactatctacataattcaagggtcatgccgtattgccatgtgattaggtattaggttcaacgcctaacctagcttgggttgttattatactcagaaatacgcacggggaatttattggcagagttggtgcctttgtaagtttattattactattgaatgatgagctaggtatctgcacgctaaacaaaggcgaatcaagtgtcactttgggcctaatgggcctcgtcaagcccatctgaatttaataacagaggtgaatacgtgcaggccgttccattgttcctgtcggagatcgcgccgacgaggatccgcggcgggctcaacatcctcttccagctcaacgtcaccatcggcatcctcttcgccaacctcgtcaactacggcaccgccaagtacgtcacacatcatcatacacacacattcagatacaaatgcaatgcattgtacgtatgatgatgaactgacatgagctgcatcattttacgtacgcatgcaggatccacccgtggggatggcggctgtcgctgtcgctggccggcatcccggcggcgctgctgacgctgggcgcgctgttcgtggtggacacgcccaacagcctgatcgagcgcgggaggctggaggaagggaaggcggtgctgaggaagatccgggggacggacaacgtggagccggagttcaacgagatcgtggaggcgagccgcgtggcgcaggaggtgaagcacccgttccgcaacctgctccagcgccggaaccggccgcagctggtgatcgccgtgctgctgcagatattccagcagttcacgggcatcaacgccatcatgttctacgcgcccgtgctgttcaacacgctcgggttcaagaccgacgcgtcgctctactccgcggtgatcacgggggccgtgaacgtgctgtccacgctggtgtccgtctactcggtggacagggtggggaggcggatgctgctgctggaggccggcgtgcagatgttcctgtcgcaggtggccatcgccgtcgtgctggggatcaaggtgacggaccggtcggacaacctcggccacgggtgggcgatcatggtggtggtgatggtgtgcacgttcgtgtcctccttcgcgtggtcgtggggcccgctcgggtggctcatccccagcgagacgttcccgctggagacgcggtcggcggggcagagcgtcaccgtgtgcgtcaacctgctcttcaccttcgtcatcgcgcaggcgttcctctccatgctctgccacctcaagtacgccatcttcgccttcttctccgcgtgggtcgtcgtcatgtcgctcttcgtgctcttcttcctgcccgagaccaagaacatccccatcgaggagatgaccgagagggtgtggaagcagcactggttctggaagcgcttcatggacgacgccgacaaacaccacgtcgtccccaatggcgggaagagcaacggcgccaccgtttaatttagtcgctgaactgttctatatatatgtcactgtctcactgatcaaatcacggttgagaaactacaccgatgctatgtatcagctcatgcgtggccatgtgagattgatcgataagcagctagcgacggcatgcaaacttaagggtagtgtagcaatttcggctctgtacgtactgcaagcaatggcgagtatttcaattcggagtgcttcttgagtttgtagtttgttgtatgagttgtatccttttatgtttctccgagcaagcctgacacgagttggcgcctcagtgtaacttgcagaacagaatgccatatatctgcacctttttttgccaaattttaattctggagctctg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0218400, RefSeq:Os03g0218400