Os03g0219100

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Revision as of 12:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0219100| Description = Phosphatidylinositol transfer protein-like, N-terminal domain containing protein| Version = NM_001055933.1 GI:1154515...")
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Gene Name

Os03g0219100

Description

Phosphatidylinositol transfer protein-like, N-terminal domain containing protein

Version

NM_001055933.1 GI:115451594 GeneID:4332081

Length

3087 bp

Definition

Oryza sativa Japonica Group Os03g0219100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6292106..6295192

Sequence Coding Region

6292265..6292357,6292476..6292593,6293040..6293128,6293224..6293270,6293362..6293450
,6294009..6294142,6294229..6294975

Expression

GEO Profiles:Os03g0219100

Genome Context

<gbrowseImage1> name=NC_008396:6292106..6295192 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:6292106..6295192 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatggagaaggtggacgccaaggagagggagaagatcgaggccgtccgcaagaccctccgcaagcaggctccgctcaccgccaagcaggcgatgtactgcaacgacgcgtgcgtggagcggttcctccgggcgagaggggagagcgtgaagaaggcggcgaaacacctgagaaccgtcctgtcctggagggacaccatcggagccgatcacatcatcgccgacgagttctccgccgagctggctgacggcgtcgcctacgtcgccggccacgacgacgaggcccgacctgtcgtggtctttcgaatcaagcaggactacccaaagttccactcccagaaatcgttcgtgcggttactggtgttcacgctggaggtggccgtgtcatgcatgtcccgcttcgtcgaccagttcgtcctcctcttcgatgcaagctttttccggtcggcgtcggctttcctcaacctgctcatgggcacgctcaagatcgtcgccgactactaccccggccgcctccaccgcgccttcgtcatcgacccgccgtccctcttctccgtcctctggaagggagtgaggccgttcgtggagctggcgccggcgacggcggtggtgtgctcgctggacttcgaggactcgctggaggacgcgtcgttcacggcgtacccgcggacggcgtcgctgcggttcgagccggcggcggccctgctggcgaccgggacgaagggcatcggcgtcggctccgcctcgtcgcggttctccgtcaccgtgtcgcacgacaacaccctcaagccgtggtacctgtccaccaccacgccgtcgtcggtggggcctcgctccgtggtgccgacctccagcccgtccctcatcggcgcgtcgccgctctcggcgcgctccttctccttcgcctcccccgccgcgcgctccaccacgacgccgcccgtccaccgcggcgcaccgctgacgccgttctcgaccaagggcgggcagaaggcgccggcgccagcgcagcagttcccgcggacgccgcggccgtcgttcctgcagtcgccgtcgatgctgttcgcgttcaagaaggacggccaggccagccgcggcgagcgggagcgcgagtccttcctgccgttcctccgcttctaccgccgcccctacgacgagatatcgtatcgcgccaagatgcggccgccgctgggcgggctcatcgccatcgtcgacgagaagtcgaagcagcacaagacggtgcagccgccgctgcgacggcacgccgggctccaccaccagcagctgttccagctccaccaccaccagaggatctga</cdnaseq>

Protein Sequence

<aaseq>MAMEKVDAKEREKIEAVRKTLRKQAPLTAKQAMYCNDACVERFL RARGESVKKAAKHLRTVLSWRDTIGADHIIADEFSAELADGVAYVAGHDDEARPVVVF RIKQDYPKFHSQKSFVRLLVFTLEVAVSCMSRFVDQFVLLFDASFFRSASAFLNLLMG TLKIVADYYPGRLHRAFVIDPPSLFSVLWKGVRPFVELAPATAVVCSLDFEDSLEDAS FTAYPRTASLRFEPAAALLATGTKGIGVGSASSRFSVTVSHDNTLKPWYLSTTTPSSV GPRSVVPTSSPSLIGASPLSARSFSFASPAARSTTTPPVHRGAPLTPFSTKGGQKAPA PAQQFPRTPRPSFLQSPSMLFAFKKDGQASRGERERESFLPFLRFYRRPYDEISYRAK MRPPLGGLIAIVDEKSKQHKTVQPPLRRHAGLHHQQLFQLHHHQRI</aaseq>

Gene Sequence

<dnaseqindica>160..252#371..488#935..1023#1119..1165#1257..1345#1904..2037#2124..2870#actgtcgcttacgcctttattttttcttctctccttcatctgttcgtcctctcctctctcctctctctcgccctctccacactggcacactctctgtgaatctctccttctgttcctggttaattcgctcttcttcctctcgtatctccgccgcgatcgatggccatggagaaggtggacgccaaggagagggagaagatcgaggccgtccgcaagaccctccgcaagcaggctccgctcaccgccaagcaggttcgccctccatggctcgttttcatgcatggcgctcgctcgctcgcggtgctgcgttttcaatcggttttggttaaccttggtggtgcgtgcgtgcgtggatggcgtgggcgagcaggcgatgtactgcaacgacgcgtgcgtggagcggttcctccgggcgagaggggagagcgtgaagaaggcggcgaaacacctgagaaccgtcctgtcctggagggacaccatcggagccggtacgttcaacaatcccagcttccatttttctccattatttccatccatccccacatcgctcctcatttactccactcccctcttttccatgtttctgccaacaaatctgagtttcatcaagcgtgtgtgtctgcatccctgcgattttccggcagcagccgggggccctgattttttttgaaatccgtggggggtttgccacattaatggtggtgcatgcccctgctctgtttcgcttctgttctcttcgcgatacctacggcacagtgtattttagtcaagctactgtgcgcctgaatttattgtgccgtgtgatttgtttccttgcaatattatgcaagcaaagtacagtctgcaacagtgtacactcttgttggtattctgttcttcgtcgggttgggggctaaattggttgattttgtgccctttgttttgtgttgagcagatcacatcatcgccgacgagttctccgccgagctggctgacggcgtcgcctacgtcgccggccacgacgacgaggcccgacctgtcgtggtacgtttccatggcctccgtgccgggtgcaaattgacactcacacgctagatggagaatatgttctgatttgacagggaggtctttttttacaggtctttcgaatcaagcaggactacccaaagttccactcccagaaatcgtaagaacgaacagatgaacacttgcctaatttaatcattaacccggtcttaacaattgattgactcttgcttcttgctggatttaattaggttcgtgcggttactggtgttcacgctggaggtggccgtgtcatgcatgtcccgcttcgtcgaccagttcgtcctcctcttcgatgcaagtaagcagccatttcttcaccatttccaactattcccgtagctgtagtagtggtactagttacatctgtgcgtgtcctttctttctccaaagaagaaagacagcgacagtgagaaaatagcggtcgcgtttctcattgcctcgcacgggcaaggcagaatgggcagtagtggcatgtgtaggtcagagctgtgcgcactgcacattcgtggggatggctcggcgagaccttcgtcgcgcgcggcgcggcgcgcccacctcgctcgcacggacgaacggggccgcatggccgtgtcgtgtcgtgtcgtcgtgtgcggttgccggcgacggcttcgcggcggtcccgcggcatcgcgcacagttaccgctacagtggcaggcacggctgccgcttttgggggcggagaccccggcttcccgccggtgcggtttgaatcgtggcgagaatgattggatcggtgatgatgcgtggaaagcgagagccgtagaatctgcaggaaagtgagaggggttgacgagacgaatcgaatcttttttttaatttttttttcatgtgcaggctttttccggtcggcgtcggctttcctcaacctgctcatgggcacgctcaagatcgtcgccgactactaccccggccgcctccaccgcgccttcgtcatcgacccgccgtccctcttctccgtcctctggaaggtatacgtcacgtttgatttcgtgttcatcgcgatggcgatggcgagtgggagatgaactgaaaaaacgggtgcggtgttgtccagggagtgaggccgttcgtggagctggcgccggcgacggcggtggtgtgctcgctggacttcgaggactcgctggaggacgcgtcgttcacggcgtacccgcggacggcgtcgctgcggttcgagccggcggcggccctgctggcgaccgggacgaagggcatcggcgtcggctccgcctcgtcgcggttctccgtcaccgtgtcgcacgacaacaccctcaagccgtggtacctgtccaccaccacgccgtcgtcggtggggcctcgctccgtggtgccgacctccagcccgtccctcatcggcgcgtcgccgctctcggcgcgctccttctccttcgcctcccccgccgcgcgctccaccacgacgccgcccgtccaccgcggcgcaccgctgacgccgttctcgaccaagggcgggcagaaggcgccggcgccagcgcagcagttcccgcggacgccgcggccgtcgttcctgcagtcgccgtcgatgctgttcgcgttcaagaaggacggccaggccagccgcggcgagcgggagcgcgagtccttcctgccgttcctccgcttctaccgccgcccctacgacgagatatcgtatcgcgccaagatgcggccgccgctgggcgggctcatcgccatcgtcgacgagaagtcgaagcagcacaagacggtgcagccgccgctgcgacggcacgccgggctccaccaccagcagctgttccagctccaccaccaccagaggatctgatctgaactccagatgatctcccgttgctgaagcatgaatccaaccgatgaagctagcgttcttctccatacattttacagcataatccaatgctataattatgctaagttgatcttttgtcgacattttccccccagtatttacctcctaggatattcttcaacccgtgtaaaataacagccctaaaatgtgagtaaaatcgaccccttttgcagcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0219100, RefSeq:Os03g0219100